RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 SOX9P48436 509 aa7.83□□□□□ -1.16
HMGN1-205ENST00000419378 ACTR2P61160 394 aa7.83□□□□□ -1.16
HMGN1-205ENST00000419378 SMAD3P84022 425 aaKnown RBP7.83□□□□□ -1.16
HMGN1-205ENST00000419378 ST3GAL1Q11201 340 aa7.83□□□□□ -1.16
HMGN1-205ENST00000419378 NPY5RQ15761 445 aa7.83□□□□□ -1.16
HMGN1-205ENST00000419378 FAM109BQ6ICB4 259 aaPredicted RBP7.83□□□□□ -1.16
HMGN1-205ENST00000419378 Q7L0L9 218 aa7.83□□□□□ -1.16
HMGN1-205ENST00000419378 LRRC8DQ7L1W4 858 aa7.83□□□□□ -1.16
HMGN1-205ENST00000419378 DEFB128Q7Z7B8 93 aa7.83□□□□□ -1.16
HMGN1-205ENST00000419378 PLA2G4DQ86XP0 818 aa7.83□□□□□ -1.16
HMGN1-205ENST00000419378 RPUSD2Q8IZ73 545 aaKnown RBP7.83□□□□□ -1.16
HMGN1-205ENST00000419378 BLIDQ8IZY5 108 aa7.83□□□□□ -1.16
HMGN1-205ENST00000419378 DAGLBQ8NCG7 672 aa7.83□□□□□ -1.16
HMGN1-205ENST00000419378 LMBR1Q8WVP7 490 aa7.83□□□□□ -1.16
HMGN1-205ENST00000419378 HERVK_113Q902F9 699 aa7.83□□□□□ -1.16
HMGN1-205ENST00000419378 LENG9Q96B70 501 aa7.83□□□□□ -1.16
HMGN1-205ENST00000419378 PCYT2Q99447 389 aa7.83□□□□□ -1.16
HMGN1-205ENST00000419378 ZNF577Q9BSK1 485 aa7.83□□□□□ -1.16
HMGN1-205ENST00000419378 TMPRSS13Q9BYE2 586 aa7.83□□□□□ -1.16
HMGN1-205ENST00000419378 MRPL18Q9H0U6 180 aaKnown RBP7.83□□□□□ -1.16
HMGN1-205ENST00000419378 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.82□□□□□ -1.16
HMGN1-205ENST00000419378 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.82□□□□□ -1.16
HMGN1-205ENST00000419378 IPO5O00410 1097 aaKnown RBP7.82□□□□□ -1.16
HMGN1-205ENST00000419378 DHX15O43143 795 aaKnown RBP7.82□□□□□ -1.16
HMGN1-205ENST00000419378 EDIL3O43854 480 aa7.82□□□□□ -1.16
HMGN1-205ENST00000419378 JAK2O60674 1132 aa7.82□□□□□ -1.16
HMGN1-205ENST00000419378 CCNE2O96020 404 aa7.82□□□□□ -1.16
HMGN1-205ENST00000419378 SLFN14P0C7P3 912 aa7.82□□□□□ -1.16
HMGN1-205ENST00000419378 MARK3P27448 753 aa7.82□□□□□ -1.16
HMGN1-205ENST00000419378 COL8A1P27658 744 aa7.82□□□□□ -1.16
HMGN1-205ENST00000419378 PPFIA1Q13136 1202 aa7.82□□□□□ -1.16
HMGN1-205ENST00000419378 COL9A2Q14055 689 aaPredicted RBP7.82□□□□□ -1.16
HMGN1-205ENST00000419378 MBTPS1Q14703 1052 aa7.82□□□□□ -1.16
HMGN1-205ENST00000419378 GPNMBQ14956 572 aa7.82□□□□□ -1.16
HMGN1-205ENST00000419378 PRR16Q569H4 304 aa7.82□□□□□ -1.16
HMGN1-205ENST00000419378 GALNT17Q6IS24 598 aa7.82□□□□□ -1.16
HMGN1-205ENST00000419378 OTOP2Q7RTS6 562 aa7.82□□□□□ -1.16
HMGN1-205ENST00000419378 HDXQ7Z353 690 aa7.82□□□□□ -1.16
HMGN1-205ENST00000419378 DEFB123Q8N688 67 aa7.82□□□□□ -1.16
HMGN1-205ENST00000419378 NSUN7Q8NE18 718 aaKnown RBP7.82□□□□□ -1.16
HMGN1-205ENST00000419378 TBCKQ8TEA7 893 aa7.82□□□□□ -1.16
HMGN1-205ENST00000419378 PRUNE2Q8WUY3 3088 aa7.82□□□□□ -1.16
HMGN1-205ENST00000419378 WASF1Q92558 559 aa7.82□□□□□ -1.16
HMGN1-205ENST00000419378 GLG1Q92896 1179 aa7.82□□□□□ -1.16
HMGN1-205ENST00000419378 ATP6V0A1Q93050 837 aa7.82□□□□□ -1.16
HMGN1-205ENST00000419378 UIMC1Q96RL1 719 aa7.82□□□□□ -1.16
HMGN1-205ENST00000419378 KIF2CQ99661 725 aa7.82□□□□□ -1.16
HMGN1-205ENST00000419378 PHF20Q9BVI0 1012 aa7.82□□□□□ -1.16
HMGN1-205ENST00000419378 C22orf23Q9BZE7 217 aa7.82□□□□□ -1.16
HMGN1-205ENST00000419378 MTIF3Q9H2K0 278 aaKnown RBP7.82□□□□□ -1.16
HMGN1-205ENST00000419378 RNPEPQ9H4A4 650 aa7.82□□□□□ -1.16
HMGN1-205ENST00000419378 SMARCAD1Q9H4L7 1026 aa7.82□□□□□ -1.16
HMGN1-205ENST00000419378 AZI2Q9H6S1 392 aa7.82□□□□□ -1.16
HMGN1-205ENST00000419378 GJB4Q9NTQ9 266 aa7.82□□□□□ -1.16
HMGN1-205ENST00000419378 SETD4Q9NVD3 440 aa7.82□□□□□ -1.16
HMGN1-205ENST00000419378 ERAP1Q9NZ08 941 aa7.82□□□□□ -1.16
HMGN1-205ENST00000419378 ORC3Q9UBD5 711 aaPredicted RBP7.82□□□□□ -1.16
HMGN1-205ENST00000419378 KCNJ14Q9UNX9 436 aa7.82□□□□□ -1.16
HMGN1-205ENST00000419378 TET1Q8NFU7 2136 aa7.82□□□□□ -1.16
HMGN1-205ENST00000419378 UNC80Q8N2C7 3258 aa7.82□□□□□ -1.16
HMGN1-205ENST00000419378 NRCAMQ92823 1304 aa7.81□□□□□ -1.16
HMGN1-205ENST00000419378 IGKV6D-21A0A0A0MT36 114 aa7.81□□□□□ -1.16
HMGN1-205ENST00000419378 MEGF11A6BM72 1044 aa7.81□□□□□ -1.16
HMGN1-205ENST00000419378 GRXCR1A8MXD5 290 aa7.81□□□□□ -1.16
HMGN1-205ENST00000419378 GFRA2O00451 464 aa7.81□□□□□ -1.16
HMGN1-205ENST00000419378 MSH4O15457 936 aa7.81□□□□□ -1.16
HMGN1-205ENST00000419378 NBNO60934 754 aa7.81□□□□□ -1.16
HMGN1-205ENST00000419378 TDP2O95551 362 aa7.81□□□□□ -1.16
HMGN1-205ENST00000419378 SPATA31C1P0DKV0 1188 aa7.81□□□□□ -1.16
HMGN1-205ENST00000419378 GNAT1P11488 350 aa7.81□□□□□ -1.16
HMGN1-205ENST00000419378 ACTN1P12814 892 aa7.81□□□□□ -1.16
HMGN1-205ENST00000419378 FDPSP14324 419 aaKnown RBP7.81□□□□□ -1.16
HMGN1-205ENST00000419378 XBP1P17861 261 aa7.81□□□□□ -1.16
HMGN1-205ENST00000419378 GTF2F1P35269 517 aaKnown RBP eCLIP7.81□□□□□ -1.16
HMGN1-205ENST00000419378 THPOP40225 353 aa7.81□□□□□ -1.16
HMGN1-205ENST00000419378 STAT5BP51692 787 aa7.81□□□□□ -1.16
HMGN1-205ENST00000419378 USP11P51784 963 aa7.81□□□□□ -1.16
HMGN1-205ENST00000419378 ADAM17P78536 824 aa7.81□□□□□ -1.16
HMGN1-205ENST00000419378 NONOQ15233 471 aaKnown RBP eCLIP7.81□□□□□ -1.16
HMGN1-205ENST00000419378 ZC3H12AQ5D1E8 599 aaKnown RBP7.81□□□□□ -1.16
HMGN1-205ENST00000419378 ZNF618Q5T7W0 954 aa7.81□□□□□ -1.16
HMGN1-205ENST00000419378 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.81□□□□□ -1.16
HMGN1-205ENST00000419378 C12orf40Q86WS4 652 aa7.81□□□□□ -1.16
HMGN1-205ENST00000419378 AGGF1Q8N302 714 aaeCLIP7.81□□□□□ -1.16
HMGN1-205ENST00000419378 ELMO3Q96BJ8 720 aa7.81□□□□□ -1.16
HMGN1-205ENST00000419378 SCARF2Q96GP6 870 aaPredicted RBP7.81□□□□□ -1.16
HMGN1-205ENST00000419378 FTOQ9C0B1 505 aaKnown RBP eCLIP7.81□□□□□ -1.167e-6■■□□□ 12.9
HMGN1-205ENST00000419378 TBC1D22BQ9NU19 505 aa7.81□□□□□ -1.16
HMGN1-205ENST00000419378 PPT2Q9UMR5 302 aa7.81□□□□□ -1.16
HMGN1-205ENST00000419378 LIMCH1Q9UPQ0 1083 aa7.81□□□□□ -1.16
HMGN1-205ENST00000419378 POLR3KQ9Y2Y1 108 aaPredicted RBP7.81□□□□□ -1.16
HMGN1-205ENST00000419378 PCDHGC5Q9Y5F6 944 aa7.81□□□□□ -1.16
HMGN1-205ENST00000419378 SLC4A7Q9Y6M7 1214 aa7.81□□□□□ -1.16
HMGN1-205ENST00000419378 CCDC194A0A1B0GVG4 234 aa7.8□□□□□ -1.16
HMGN1-205ENST00000419378 MBLAC1A4D2B0 266 aaPredicted RBP7.8□□□□□ -1.16
HMGN1-205ENST00000419378 RSPH10B2B2RC85 870 aa7.8□□□□□ -1.16
HMGN1-205ENST00000419378 RBAK-RBAKDNI3L0D1 243 aa7.8□□□□□ -1.16
HMGN1-205ENST00000419378 CAND2O75155 1236 aa7.8□□□□□ -1.16
HMGN1-205ENST00000419378 BAIAP3O94812 1187 aa7.8□□□□□ -1.16
HMGN1-205ENST00000419378 PARNO95453 639 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms