RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 KCNG4Q8TDN1 519 aa22.24■■□□□ 1.15
GTF3A-202ENST00000419181 DNAJC19Q96DA6 116 aa22.24■■□□□ 1.15
GTF3A-202ENST00000419181 MRPL17Q9NRX2 175 aaKnown RBP22.24■■□□□ 1.15
GTF3A-202ENST00000419181 CLDN3O15551 220 aa22.23■■□□□ 1.15
GTF3A-202ENST00000419181 URODP06132 367 aa22.23■■□□□ 1.15
GTF3A-202ENST00000419181 HARSP12081 509 aaKnown RBP22.23■■□□□ 1.15
GTF3A-202ENST00000419181 NMT1P30419 496 aaKnown RBP22.23■■□□□ 1.15
GTF3A-202ENST00000419181 GTF2BQ00403 316 aa22.23■■□□□ 1.15
GTF3A-202ENST00000419181 DNM1Q05193 864 aaKnown RBP22.23■■□□□ 1.15
GTF3A-202ENST00000419181 ANKRD54Q6NXT1 300 aa22.23■■□□□ 1.15
GTF3A-202ENST00000419181 FUT10Q6P4F1 479 aa22.23■■□□□ 1.15
GTF3A-202ENST00000419181 SHC4Q6S5L8 630 aa22.23■■□□□ 1.15
GTF3A-202ENST00000419181 CASP10Q92851 521 aa22.23■■□□□ 1.15
GTF3A-202ENST00000419181 BICD1Q96G01 975 aa22.23■■□□□ 1.15
GTF3A-202ENST00000419181 SNX27Q96L92 541 aa22.23■■□□□ 1.15
GTF3A-202ENST00000419181 ACAP3Q96P50 834 aa22.23■■□□□ 1.15
GTF3A-202ENST00000419181 GPR62Q9BZJ7 368 aa22.23■■□□□ 1.15
GTF3A-202ENST00000419181 HAPLN2Q9GZV7 340 aa22.23■■□□□ 1.15
GTF3A-202ENST00000419181 ST6GALNAC4Q9H4F1 302 aa22.23■■□□□ 1.15
GTF3A-202ENST00000419181 CHST7Q9NS84 486 aa22.23■■□□□ 1.15
GTF3A-202ENST00000419181 PRKAG3Q9UGI9 489 aa22.23■■□□□ 1.15
GTF3A-202ENST00000419181 CFAP45Q9UL16 551 aa22.23■■□□□ 1.15
GTF3A-202ENST00000419181 PDCD11Q14690 1871 aaKnown RBP22.23■■□□□ 1.15
GTF3A-202ENST00000419181 SMIM28A0A1B0GU29 152 aa22.22■■□□□ 1.15
GTF3A-202ENST00000419181 HNRNPDLO14979 420 aaKnown RBP22.22■■□□□ 1.15
GTF3A-202ENST00000419181 MEFVO15553 781 aaPredicted RBP22.22■■□□□ 1.15
GTF3A-202ENST00000419181 KIF4AO95239 1232 aa22.22■■□□□ 1.15
GTF3A-202ENST00000419181 CNPP09543 421 aaKnown RBP22.22■■□□□ 1.15
GTF3A-202ENST00000419181 ABCD1P33897 745 aa22.22■■□□□ 1.15
GTF3A-202ENST00000419181 GLUD2P49448 558 aa22.22■■□□□ 1.15
GTF3A-202ENST00000419181 E2F4Q16254 413 aa22.22■■□□□ 1.15
GTF3A-202ENST00000419181 KIAA0319Q5VV43 1072 aa22.22■■□□□ 1.15
GTF3A-202ENST00000419181 SYCE2Q6PIF2 218 aa22.22■■□□□ 1.15
GTF3A-202ENST00000419181 SFR1Q86XK3 245 aa22.22■■□□□ 1.15
GTF3A-202ENST00000419181 MAP4K3Q8IVH8 894 aa22.22■■□□□ 1.15
GTF3A-202ENST00000419181 TMEM87AQ8NBN3 555 aa22.22■■□□□ 1.15
GTF3A-202ENST00000419181 KLHL5Q96PQ7 755 aa22.22■■□□□ 1.15
GTF3A-202ENST00000419181 EMILIN2Q9BXX0 1053 aa22.22■■□□□ 1.15
GTF3A-202ENST00000419181 CD320Q9NPF0 282 aa22.22■■□□□ 1.15
GTF3A-202ENST00000419181 SSX2IPQ9Y2D8 614 aa22.22■■□□□ 1.15
GTF3A-202ENST00000419181 ZDHHC9Q9Y397 364 aa22.22■■□□□ 1.15
GTF3A-202ENST00000419181 USP15Q9Y4E8 981 aaPredicted RBP22.22■■□□□ 1.15
GTF3A-202ENST00000419181 TADA2AO75478 443 aa22.21■■□□□ 1.15
GTF3A-202ENST00000419181 HOXB8P17481 243 aaPredicted RBP22.21■■□□□ 1.15
GTF3A-202ENST00000419181 SSTR3P32745 418 aaPredicted RBP22.21■■□□□ 1.15
GTF3A-202ENST00000419181 LIG4P49917 911 aa22.21■■□□□ 1.15
GTF3A-202ENST00000419181 DSG1Q02413 1049 aa22.21■■□□□ 1.15
GTF3A-202ENST00000419181 ZP2Q05996 745 aa22.21■■□□□ 1.15
GTF3A-202ENST00000419181 SLC22A17Q8WUG5 538 aa22.21■■□□□ 1.15
GTF3A-202ENST00000419181 ZMAT2Q96NC0 199 aaKnown RBP22.21■■□□□ 1.15
GTF3A-202ENST00000419181 S1PR5Q9H228 398 aa22.21■■□□□ 1.15
GTF3A-202ENST00000419181 CNTN3Q9P232 1028 aa22.21■■□□□ 1.15
GTF3A-202ENST00000419181 SEL1LQ9UBV2 794 aa22.21■■□□□ 1.15
GTF3A-202ENST00000419181 SF3B1O75533 1304 aaKnown RBP eCLIP22.21■■□□□ 1.151e-6■■■■■ 64.6
GTF3A-202ENST00000419181 C2CD2LO14523 706 aa22.2■■□□□ 1.14
GTF3A-202ENST00000419181 KCNE1P15382 129 aa22.2■■□□□ 1.14
GTF3A-202ENST00000419181 EPCAMP16422 314 aa22.2■■□□□ 1.14
GTF3A-202ENST00000419181 GAP43P17677 238 aa22.2■■□□□ 1.14
GTF3A-202ENST00000419181 USP41Q3LFD5 358 aa22.2■■□□□ 1.14
GTF3A-202ENST00000419181 SEZ6Q53EL9 994 aa22.2■■□□□ 1.14
GTF3A-202ENST00000419181 ZC2HC1CQ53FD0 456 aaPredicted RBP22.2■■□□□ 1.14
GTF3A-202ENST00000419181 SLC39A4Q6P5W5 647 aa22.2■■□□□ 1.14
GTF3A-202ENST00000419181 ZNF720Q7Z2F6 126 aa22.2■■□□□ 1.14
GTF3A-202ENST00000419181 PPFIBP1Q86W92 1011 aa22.2■■□□□ 1.14
GTF3A-202ENST00000419181 ADHFE1Q8IWW8 467 aa22.2■■□□□ 1.14
GTF3A-202ENST00000419181 GPR65Q8IYL9 337 aa22.2■■□□□ 1.14
GTF3A-202ENST00000419181 GJD3Q8N144 294 aa22.2■■□□□ 1.14
GTF3A-202ENST00000419181 HASPINQ8TF76 798 aa22.2■■□□□ 1.14
GTF3A-202ENST00000419181 SUSD6Q92537 303 aa22.2■■□□□ 1.14
GTF3A-202ENST00000419181 B3GALT6Q96L58 329 aa22.2■■□□□ 1.14
GTF3A-202ENST00000419181 RCOR1Q9UKL0 485 aa22.2■■□□□ 1.14
GTF3A-202ENST00000419181 PCDHA7Q9UN72 937 aa22.2■■□□□ 1.14
GTF3A-202ENST00000419181 FRMD3A2A2Y4 597 aa22.19■■□□□ 1.14
GTF3A-202ENST00000419181 TMEM189-UBE2V1I3L0A0 370 aa22.19■■□□□ 1.14
GTF3A-202ENST00000419181 FAM189A1O60320 539 aa22.19■■□□□ 1.14
GTF3A-202ENST00000419181 PPP1R37O75864 691 aa22.19■■□□□ 1.14
GTF3A-202ENST00000419181 MATR3P43243 847 aaKnown RBP eCLIP22.19■■□□□ 1.14
GTF3A-202ENST00000419181 ME1P48163 572 aa22.19■■□□□ 1.14
GTF3A-202ENST00000419181 CLCN4P51793 760 aa22.19■■□□□ 1.14
GTF3A-202ENST00000419181 SOX4Q06945 474 aaPredicted RBP22.19■■□□□ 1.14
GTF3A-202ENST00000419181 SLC10A6Q3KNW5 377 aa22.19■■□□□ 1.14
GTF3A-202ENST00000419181 KIAA1841Q6NSI8 718 aa22.19■■□□□ 1.14
GTF3A-202ENST00000419181 UROC1Q96N76 676 aa22.19■■□□□ 1.14
GTF3A-202ENST00000419181 STRA6Q9BX79 667 aa22.19■■□□□ 1.14
GTF3A-202ENST00000419181 TNMDQ9H2S6 317 aa22.19■■□□□ 1.14
GTF3A-202ENST00000419181 CUEDC2Q9H467 287 aa22.19■■□□□ 1.14
GTF3A-202ENST00000419181 GOLGA2P5Q9HBQ8 144 aa22.19■■□□□ 1.14
GTF3A-202ENST00000419181 RXFP1Q9HBX9 757 aa22.19■■□□□ 1.14
GTF3A-202ENST00000419181 OLFML3Q9NRN5 406 aa22.19■■□□□ 1.14
GTF3A-202ENST00000419181 SLC38A7Q9NVC3 462 aa22.19■■□□□ 1.14
GTF3A-202ENST00000419181 KBTBD4Q9NVX7 518 aa22.19■■□□□ 1.14
GTF3A-202ENST00000419181 VWA8A3KMH1 1905 aa22.18■■□□□ 1.14
GTF3A-202ENST00000419181 PLXNA3P51805 1871 aa22.18■■□□□ 1.14
GTF3A-202ENST00000419181 A0A0B4J269 797 aa22.18■■□□□ 1.14
GTF3A-202ENST00000419181 C19orf67A6NJJ6 358 aa22.18■■□□□ 1.14
GTF3A-202ENST00000419181 TEX28O15482 410 aa22.18■■□□□ 1.14
GTF3A-202ENST00000419181 CLTAP09496 248 aa22.18■■□□□ 1.14
GTF3A-202ENST00000419181 KLRC2P26717 231 aa22.18■■□□□ 1.14
GTF3A-202ENST00000419181 CLCNKBP51801 687 aa22.18■■□□□ 1.14
GTF3A-202ENST00000419181 UPP1Q16831 310 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms