RNA–Protein interactions for RNA: ENST00000418454.2

HMGA1P6-201, Transcript of high mobility group AT-hook 1 pseudogene 6, humanhuman

BASIC

Gene HMGA1P6, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P6-201ENST00000418454 CATSPER4Q7RTX7 472 aa10.93□□□□□ -0.66
HMGA1P6-201ENST00000418454 HACE1Q8IYU2 909 aa10.93□□□□□ -0.66
HMGA1P6-201ENST00000418454 CCAR2Q8N163 923 aaKnown RBP10.93□□□□□ -0.66
HMGA1P6-201ENST00000418454 CCDC155Q8N6L0 562 aa10.93□□□□□ -0.66
HMGA1P6-201ENST00000418454 ANKLE1Q8NAG6 615 aa10.93□□□□□ -0.66
HMGA1P6-201ENST00000418454 PLEKHO2Q8TD55 490 aa10.93□□□□□ -0.66
HMGA1P6-201ENST00000418454 LENG1Q96BZ8 264 aaPredicted RBP10.93□□□□□ -0.66
HMGA1P6-201ENST00000418454 ZBTB45Q96K62 511 aaPredicted RBP10.93□□□□□ -0.66
HMGA1P6-201ENST00000418454 CCDC42Q96M95 316 aa10.93□□□□□ -0.66
HMGA1P6-201ENST00000418454 ACAP3Q96P50 834 aa10.93□□□□□ -0.66
HMGA1P6-201ENST00000418454 SPAG5Q96R06 1193 aa10.93□□□□□ -0.66
HMGA1P6-201ENST00000418454 CCDC94Q9BW85 323 aaPredicted RBP10.93□□□□□ -0.66
HMGA1P6-201ENST00000418454 CDT1Q9H211 546 aa10.93□□□□□ -0.66
HMGA1P6-201ENST00000418454 VRTNQ9H8Y1 702 aa10.93□□□□□ -0.66
HMGA1P6-201ENST00000418454 UBN1Q9NPG3 1134 aa10.93□□□□□ -0.66
HMGA1P6-201ENST00000418454 TOPORSQ9NS56 1045 aaPredicted RBP10.93□□□□□ -0.66
HMGA1P6-201ENST00000418454 ANKFY1Q9P2R3 1169 aa10.93□□□□□ -0.66
HMGA1P6-201ENST00000418454 PTCH2Q9Y6C5 1203 aa10.93□□□□□ -0.66
HMGA1P6-201ENST00000418454 EPN1Q9Y6I3 576 aaPredicted RBP10.93□□□□□ -0.66
HMGA1P6-201ENST00000418454 SCN10AQ9Y5Y9 1956 aa10.93□□□□□ -0.66
HMGA1P6-201ENST00000418454 ZSWIM8A7E2V4 1837 aa10.93□□□□□ -0.66
HMGA1P6-201ENST00000418454 GRIN2DO15399 1336 aa10.92□□□□□ -0.66
HMGA1P6-201ENST00000418454 MROH7Q68CQ1 1323 aa10.92□□□□□ -0.66
HMGA1P6-201ENST00000418454 GOLGA8IPA6NC78 632 aa10.92□□□□□ -0.66
HMGA1P6-201ENST00000418454 LRRC53A6NM62 1247 aa10.92□□□□□ -0.66
HMGA1P6-201ENST00000418454 GOLGA8JA6NMD2 632 aa10.92□□□□□ -0.66
HMGA1P6-201ENST00000418454 RBAK-RBAKDNI3L0D1 243 aa10.92□□□□□ -0.66
HMGA1P6-201ENST00000418454 RNF225M0QZC1 329 aaPredicted RBP10.92□□□□□ -0.66
HMGA1P6-201ENST00000418454 ARVCFO00192 962 aa10.92□□□□□ -0.66
HMGA1P6-201ENST00000418454 XPOTO43592 962 aaKnown RBP10.92□□□□□ -0.66
HMGA1P6-201ENST00000418454 ECM2O94769 699 aaPredicted RBP10.92□□□□□ -0.66
HMGA1P6-201ENST00000418454 TNNC2P02585 160 aa10.92□□□□□ -0.66
HMGA1P6-201ENST00000418454 EDN1P05305 212 aa10.92□□□□□ -0.66
HMGA1P6-201ENST00000418454 GJB1P08034 283 aa10.92□□□□□ -0.66
HMGA1P6-201ENST00000418454 STAG3L1P0CL83 205 aa10.92□□□□□ -0.66
HMGA1P6-201ENST00000418454 CLCN1P35523 988 aa10.92□□□□□ -0.66
HMGA1P6-201ENST00000418454 GCLMP48507 274 aa10.92□□□□□ -0.66
HMGA1P6-201ENST00000418454 BPIFB4P59827 614 aa10.92□□□□□ -0.66
HMGA1P6-201ENST00000418454 MGAT3Q09327 533 aa10.92□□□□□ -0.66
HMGA1P6-201ENST00000418454 TMEM132AQ24JP5 1023 aa10.92□□□□□ -0.66
HMGA1P6-201ENST00000418454 KIZQ2M2Z5 673 aa10.92□□□□□ -0.66
HMGA1P6-201ENST00000418454 XKR4Q5GH76 650 aa10.92□□□□□ -0.66
HMGA1P6-201ENST00000418454 PPP1R2P3Q6NXS1 205 aa10.92□□□□□ -0.66
HMGA1P6-201ENST00000418454 ALKAL1Q6UXT8 129 aa10.92□□□□□ -0.66
HMGA1P6-201ENST00000418454 RUFY4Q6ZNE9 571 aa10.92□□□□□ -0.66
HMGA1P6-201ENST00000418454 IRF2BP2Q7Z5L9 587 aa10.92□□□□□ -0.66
HMGA1P6-201ENST00000418454 VPS36Q86VN1 386 aa10.92□□□□□ -0.66
HMGA1P6-201ENST00000418454 CAGE1Q8TC20 777 aa10.92□□□□□ -0.66
HMGA1P6-201ENST00000418454 CCDC127Q96BQ5 260 aa10.92□□□□□ -0.66
HMGA1P6-201ENST00000418454 ANKRD36BP1Q96IX9 119 aa10.92□□□□□ -0.66
HMGA1P6-201ENST00000418454 NT5C1BQ96P26 610 aa10.92□□□□□ -0.66
HMGA1P6-201ENST00000418454 CRACR2AQ9BSW2 395 aa10.92□□□□□ -0.66
HMGA1P6-201ENST00000418454 FAM49AQ9H0Q0 323 aaPredicted RBP10.92□□□□□ -0.66
HMGA1P6-201ENST00000418454 NHEJ1Q9H9Q4 299 aaPredicted RBP10.92□□□□□ -0.66
HMGA1P6-201ENST00000418454 RNF216Q9NWF9 866 aaPredicted RBP10.92□□□□□ -0.66
HMGA1P6-201ENST00000418454 MYO1AQ9UBC5 1043 aa10.92□□□□□ -0.66
HMGA1P6-201ENST00000418454 ZNF623O75123 536 aa10.91□□□□□ -0.66
HMGA1P6-201ENST00000418454 NDUFA10O95299 355 aa10.91□□□□□ -0.66
HMGA1P6-201ENST00000418454 TRIM49P0CI25 452 aa10.91□□□□□ -0.66
HMGA1P6-201ENST00000418454 TRIM49CP0CI26 452 aa10.91□□□□□ -0.66
HMGA1P6-201ENST00000418454 CYP3A5P20815 502 aa10.91□□□□□ -0.66
HMGA1P6-201ENST00000418454 SOX5P35711 763 aa10.91□□□□□ -0.66
HMGA1P6-201ENST00000418454 KLK7P49862 253 aa10.91□□□□□ -0.66
HMGA1P6-201ENST00000418454 RAB27AP51159 221 aa10.91□□□□□ -0.66
HMGA1P6-201ENST00000418454 YARSP54577 528 aaKnown RBP10.91□□□□□ -0.66
HMGA1P6-201ENST00000418454 BMS1Q14692 1282 aaKnown RBP10.91□□□□□ -0.66
HMGA1P6-201ENST00000418454 ENOX2Q16206 610 aaKnown RBP10.91□□□□□ -0.66
HMGA1P6-201ENST00000418454 ASTE1Q2TB18 679 aaPredicted RBP10.91□□□□□ -0.66
HMGA1P6-201ENST00000418454 E4F1Q66K89 784 aaPredicted RBP10.91□□□□□ -0.66
HMGA1P6-201ENST00000418454 PHLDB3Q6NSJ2 640 aa10.91□□□□□ -0.66
HMGA1P6-201ENST00000418454 FBXO46Q6PJ61 603 aaPredicted RBP10.91□□□□□ -0.66
HMGA1P6-201ENST00000418454 CTU1Q7Z7A3 348 aaKnown RBP10.91□□□□□ -0.66
HMGA1P6-201ENST00000418454 ZNF677Q86XU0 584 aa10.91□□□□□ -0.66
HMGA1P6-201ENST00000418454 ZNF516Q92618 1163 aa10.91□□□□□ -0.66
HMGA1P6-201ENST00000418454 TOX2Q96NM4 488 aa10.91□□□□□ -0.66
HMGA1P6-201ENST00000418454 IMPG2Q9BZV3 1241 aa10.91□□□□□ -0.66
HMGA1P6-201ENST00000418454 SENP6Q9GZR1 1112 aaPredicted RBP10.91□□□□□ -0.66
HMGA1P6-201ENST00000418454 CRISPLD2Q9H0B8 497 aa10.91□□□□□ -0.66
HMGA1P6-201ENST00000418454 PDE11AQ9HCR9 933 aa10.91□□□□□ -0.66
HMGA1P6-201ENST00000418454 STARD7Q9NQZ5 370 aa10.91□□□□□ -0.66
HMGA1P6-201ENST00000418454 DNAJC12Q9UKB3 198 aa10.91□□□□□ -0.66
HMGA1P6-201ENST00000418454 ITGA11Q9UKX5 1188 aa10.91□□□□□ -0.66
HMGA1P6-201ENST00000418454 INTUQ9ULD6 942 aa10.91□□□□□ -0.66
HMGA1P6-201ENST00000418454 PYCARDQ9ULZ3 195 aa10.91□□□□□ -0.66
HMGA1P6-201ENST00000418454 CNTN6Q9UQ52 1028 aa10.91□□□□□ -0.66
HMGA1P6-201ENST00000418454 ADGRG1Q9Y653 693 aa10.91□□□□□ -0.66
HMGA1P6-201ENST00000418454 A0A1W2PQ45 241 aaPredicted RBP10.9□□□□□ -0.66
HMGA1P6-201ENST00000418454 A0A1W2PQY0 241 aa10.9□□□□□ -0.66
HMGA1P6-201ENST00000418454 TTLL13PA6NNM8 815 aa10.9□□□□□ -0.66
HMGA1P6-201ENST00000418454 F8VZ95 297 aa10.9□□□□□ -0.66
HMGA1P6-201ENST00000418454 EPHB6O15197 1021 aa10.9□□□□□ -0.66
HMGA1P6-201ENST00000418454 B4GALT5O43286 388 aa10.9□□□□□ -0.66
HMGA1P6-201ENST00000418454 RPS6KA5O75582 802 aa10.9□□□□□ -0.66
HMGA1P6-201ENST00000418454 ASS1P00966 412 aaKnown RBP10.9□□□□□ -0.66
HMGA1P6-201ENST00000418454 DLATP10515 647 aaKnown RBP10.9□□□□□ -0.66
HMGA1P6-201ENST00000418454 COL6A1P12109 1028 aa10.9□□□□□ -0.66
HMGA1P6-201ENST00000418454 P4HA1P13674 534 aa10.9□□□□□ -0.66
HMGA1P6-201ENST00000418454 KCNE1P15382 129 aa10.9□□□□□ -0.66
HMGA1P6-201ENST00000418454 YWHAEP62258 255 aaKnown RBP10.9□□□□□ -0.66
HMGA1P6-201ENST00000418454 IRX5P78411 483 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms