RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 STRN3Q13033 797 aa14.34□□□□□ -0.11
HLA-DMB-258ENST00000418107 PPFIA1Q13136 1202 aa14.34□□□□□ -0.11
HLA-DMB-258ENST00000418107 BTG3Q14201 252 aaPredicted RBP14.34□□□□□ -0.11
HLA-DMB-258ENST00000418107 IER5Q5VY09 327 aa14.34□□□□□ -0.11
HLA-DMB-258ENST00000418107 FRMD5Q7Z6J6 570 aa14.34□□□□□ -0.11
HLA-DMB-258ENST00000418107 ZC3H3Q8IXZ2 948 aaKnown RBP14.34□□□□□ -0.11
HLA-DMB-258ENST00000418107 TMEM161BQ8NDZ6 487 aa14.34□□□□□ -0.11
HLA-DMB-258ENST00000418107 CPLX3Q8WVH0 158 aa14.34□□□□□ -0.11
HLA-DMB-258ENST00000418107 CLP1Q92989 425 aaKnown RBP14.34□□□□□ -0.11
HLA-DMB-258ENST00000418107 STRA6Q9BX79 667 aa14.34□□□□□ -0.11
HLA-DMB-258ENST00000418107 NDST4Q9H3R1 872 aa14.34□□□□□ -0.11
HLA-DMB-258ENST00000418107 METTL14Q9HCE5 456 aaKnown RBP14.34□□□□□ -0.11
HLA-DMB-258ENST00000418107 AGPAT3Q9NRZ7 376 aa14.34□□□□□ -0.11
HLA-DMB-258ENST00000418107 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.34□□□□□ -0.11
HLA-DMB-258ENST00000418107 ZMYM2Q9UBW7 1377 aa14.34□□□□□ -0.11
HLA-DMB-258ENST00000418107 ZNF318Q5VUA4 2279 aa14.34□□□□□ -0.11
HLA-DMB-258ENST00000418107 TULP1O00294 542 aaPredicted RBP14.34□□□□□ -0.11
HLA-DMB-258ENST00000418107 SLC16A3O15427 465 aaKnown RBP14.34□□□□□ -0.11
HLA-DMB-258ENST00000418107 EXOC3O60645 756 aa14.34□□□□□ -0.11
HLA-DMB-258ENST00000418107 INSRRP14616 1297 aa14.34□□□□□ -0.11
HLA-DMB-258ENST00000418107 GLRA2P23416 452 aa14.34□□□□□ -0.11
HLA-DMB-258ENST00000418107 PSMC2P35998 433 aaKnown RBP14.34□□□□□ -0.11
HLA-DMB-258ENST00000418107 ARL2P36404 184 aa14.34□□□□□ -0.11
HLA-DMB-258ENST00000418107 NAMPTP43490 491 aa14.34□□□□□ -0.11
HLA-DMB-258ENST00000418107 SNRPFP62306 86 aaKnown RBP14.34□□□□□ -0.11
HLA-DMB-258ENST00000418107 SMAD4Q13485 552 aaKnown RBP14.34□□□□□ -0.11
HLA-DMB-258ENST00000418107 ARID5BQ14865 1188 aa14.34□□□□□ -0.11
HLA-DMB-258ENST00000418107 TCERG1LQ5VWI1 586 aa14.34□□□□□ -0.11
HLA-DMB-258ENST00000418107 TAF2Q6P1X5 1199 aa14.34□□□□□ -0.11
HLA-DMB-258ENST00000418107 LRRC8AQ8IWT6 810 aa14.34□□□□□ -0.11
HLA-DMB-258ENST00000418107 FAM186BQ8IYM0 893 aa14.34□□□□□ -0.11
HLA-DMB-258ENST00000418107 ASAP3Q8TDY4 903 aa14.34□□□□□ -0.11
HLA-DMB-258ENST00000418107 CACTINQ8WUQ7 758 aaKnown RBP14.34□□□□□ -0.11
HLA-DMB-258ENST00000418107 TRAPPC12Q8WVT3 735 aa14.34□□□□□ -0.11
HLA-DMB-258ENST00000418107 DNAJB3Q8WWF6 145 aa14.34□□□□□ -0.11
HLA-DMB-258ENST00000418107 PSPC1Q8WXF1 523 aaKnown RBP14.34□□□□□ -0.11
HLA-DMB-258ENST00000418107 ZNF689Q96CS4 500 aaPredicted RBP14.34□□□□□ -0.11
HLA-DMB-258ENST00000418107 POP1Q99575 1024 aaKnown RBP14.34□□□□□ -0.11
HLA-DMB-258ENST00000418107 NTPCRQ9BSD7 190 aaKnown RBP14.34□□□□□ -0.11
HLA-DMB-258ENST00000418107 IKZF4Q9H2S9 585 aa14.34□□□□□ -0.11
HLA-DMB-258ENST00000418107 ALG13Q9NP73 1137 aaKnown RBP14.34□□□□□ -0.11
HLA-DMB-258ENST00000418107 SUCLA2Q9P2R7 463 aaPredicted RBP14.34□□□□□ -0.11
HLA-DMB-258ENST00000418107 A0A1W2PQC6 194 aa14.33□□□□□ -0.12
HLA-DMB-258ENST00000418107 AKR1B15C9JRZ8 316 aaPredicted RBP14.33□□□□□ -0.12
HLA-DMB-258ENST00000418107 MAGEB2O15479 319 aa14.33□□□□□ -0.12
HLA-DMB-258ENST00000418107 SRGAP2CP0DJJ0 459 aa14.33□□□□□ -0.12
HLA-DMB-258ENST00000418107 SCP2P22307 547 aa14.33□□□□□ -0.12
HLA-DMB-258ENST00000418107 PPP2R3AQ06190 1150 aa14.33□□□□□ -0.12
HLA-DMB-258ENST00000418107 LRMPQ12912 555 aa14.33□□□□□ -0.12
HLA-DMB-258ENST00000418107 CAMK1Q14012 370 aa14.33□□□□□ -0.12
HLA-DMB-258ENST00000418107 TRIM14Q14142 442 aa14.33□□□□□ -0.12
HLA-DMB-258ENST00000418107 MXD4Q14582 209 aaPredicted RBP14.33□□□□□ -0.12
HLA-DMB-258ENST00000418107 GRIK4Q16099 956 aa14.33□□□□□ -0.12
HLA-DMB-258ENST00000418107 NFIL3Q16649 462 aa14.33□□□□□ -0.12
HLA-DMB-258ENST00000418107 FBXO47Q5MNV8 452 aa14.33□□□□□ -0.12
HLA-DMB-258ENST00000418107 EFCAB12Q6NXP0 572 aa14.33□□□□□ -0.12
HLA-DMB-258ENST00000418107 ARMCX5Q6P1M9 558 aa14.33□□□□□ -0.12
HLA-DMB-258ENST00000418107 RSPH3Q86UC2 560 aa14.33□□□□□ -0.12
HLA-DMB-258ENST00000418107 RNF135Q8IUD6 432 aa14.33□□□□□ -0.12
HLA-DMB-258ENST00000418107 LRRC71Q8N4P6 559 aa14.33□□□□□ -0.12
HLA-DMB-258ENST00000418107 PRPF31Q8WWY3 499 aaKnown RBP14.33□□□□□ -0.12
HLA-DMB-258ENST00000418107 CEP89Q96ST8 783 aa14.33□□□□□ -0.12
HLA-DMB-258ENST00000418107 KCNH6Q9H252 994 aa14.33□□□□□ -0.12
HLA-DMB-258ENST00000418107 PCIF1Q9H4Z3 704 aa14.33□□□□□ -0.12
HLA-DMB-258ENST00000418107 CD207Q9UJ71 328 aa14.33□□□□□ -0.12
HLA-DMB-258ENST00000418107 CDY2AQ9Y6F7 541 aa14.33□□□□□ -0.12
HLA-DMB-258ENST00000418107 ITIH6Q6UXX5 1313 aa14.32□□□□□ -0.12
HLA-DMB-258ENST00000418107 K7ERI5 159 aa14.32□□□□□ -0.12
HLA-DMB-258ENST00000418107 DGKIO75912 1065 aa14.32□□□□□ -0.12
HLA-DMB-258ENST00000418107 KRT13P13646 458 aa14.32□□□□□ -0.12
HLA-DMB-258ENST00000418107 TMOD1P28289 359 aa14.32□□□□□ -0.12
HLA-DMB-258ENST00000418107 PBX1P40424 430 aa14.32□□□□□ -0.12
HLA-DMB-258ENST00000418107 MATR3P43243 847 aaKnown RBP eCLIP14.32□□□□□ -0.12
HLA-DMB-258ENST00000418107 CASP4P49662 377 aa14.32□□□□□ -0.12
HLA-DMB-258ENST00000418107 LIG4P49917 911 aa14.32□□□□□ -0.12
HLA-DMB-258ENST00000418107 MARSP56192 900 aaKnown RBP14.32□□□□□ -0.12
HLA-DMB-258ENST00000418107 GOLGA8FQ08AF8 430 aa14.32□□□□□ -0.12
HLA-DMB-258ENST00000418107 GOLGA8DPQ0D2H9 430 aa14.32□□□□□ -0.12
HLA-DMB-258ENST00000418107 TBX2Q13207 712 aaPredicted RBP14.32□□□□□ -0.12
HLA-DMB-258ENST00000418107 TFDP1Q14186 410 aa14.32□□□□□ -0.12
HLA-DMB-258ENST00000418107 SYCP1Q15431 976 aa14.32□□□□□ -0.12
HLA-DMB-258ENST00000418107 TSR1Q2NL82 804 aaKnown RBP14.32□□□□□ -0.12
HLA-DMB-258ENST00000418107 DCAF17Q5H9S7 520 aaPredicted RBP14.32□□□□□ -0.12
HLA-DMB-258ENST00000418107 MIIPQ5JXC2 388 aa14.32□□□□□ -0.12
HLA-DMB-258ENST00000418107 MARCH8Q5T0T0 291 aa14.32□□□□□ -0.12
HLA-DMB-258ENST00000418107 TSHZ1Q6ZSZ6 1077 aa14.32□□□□□ -0.12
HLA-DMB-258ENST00000418107 MAP4K3Q8IVH8 894 aa14.32□□□□□ -0.12
HLA-DMB-258ENST00000418107 ZBTB8OSQ8IWT0 167 aa14.32□□□□□ -0.12
HLA-DMB-258ENST00000418107 LINC01599Q8WXQ3 324 aa14.32□□□□□ -0.12
HLA-DMB-258ENST00000418107 ZBTB10Q96DT7 871 aa14.32□□□□□ -0.12
HLA-DMB-258ENST00000418107 MFSD14AQ96MC6 490 aa14.32□□□□□ -0.12
HLA-DMB-258ENST00000418107 PLVAPQ9BX97 442 aa14.32□□□□□ -0.12
HLA-DMB-258ENST00000418107 KCNF1Q9H3M0 494 aa14.32□□□□□ -0.12
HLA-DMB-258ENST00000418107 AGO3Q9H9G7 860 aaKnown RBP14.32□□□□□ -0.12
HLA-DMB-258ENST00000418107 PLAGL2Q9UPG8 496 aa14.32□□□□□ -0.12
HLA-DMB-258ENST00000418107 MRPL42Q9Y6G3 142 aaKnown RBP14.32□□□□□ -0.12
HLA-DMB-258ENST00000418107 COL1A2P08123 1366 aa14.32□□□□□ -0.12
HLA-DMB-258ENST00000418107 TTC3P53804 2025 aa14.31□□□□□ -0.12
HLA-DMB-258ENST00000418107 MBLAC1A4D2B0 266 aaPredicted RBP14.31□□□□□ -0.12
HLA-DMB-258ENST00000418107 ZBTB42B2RXF5 422 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms