RNA–Protein interactions for RNA: ENST00000417382.5

HMG20B-204, Transcript of high mobility group 20B, humanhuman

TSL 4

Gene HMG20B, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-204ENST00000417382 MSLNLQ96KJ4 702 aa23.07■■□□□ 1.28
HMG20B-204ENST00000417382 SNX27Q96L92 541 aa23.07■■□□□ 1.28
HMG20B-204ENST00000417382 UROC1Q96N76 676 aa23.07■■□□□ 1.28
HMG20B-204ENST00000417382 HERC2P3Q9BVR0 1158 aa23.07■■□□□ 1.28
HMG20B-204ENST00000417382 PLEKHA5Q9HAU0 1116 aa23.07■■□□□ 1.28
HMG20B-204ENST00000417382 SLC38A7Q9NVC3 462 aa23.07■■□□□ 1.28
HMG20B-204ENST00000417382 CNTN3Q9P232 1028 aa23.07■■□□□ 1.28
HMG20B-204ENST00000417382 ADAM28Q9UKQ2 775 aa23.07■■□□□ 1.28
HMG20B-204ENST00000417382 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.07■■□□□ 1.28
HMG20B-204ENST00000417382 SMIM28A0A1B0GU29 152 aa23.06■■□□□ 1.28
HMG20B-204ENST00000417382 H3BQ06 376 aaPredicted RBP23.06■■□□□ 1.28
HMG20B-204ENST00000417382 PER2O15055 1255 aa23.06■■□□□ 1.28
HMG20B-204ENST00000417382 POLR2DO15514 142 aaKnown RBP23.06■■□□□ 1.28
HMG20B-204ENST00000417382 LINC01565O15544 149 aa23.06■■□□□ 1.28
HMG20B-204ENST00000417382 LILRB3O75022 631 aa23.06■■□□□ 1.28
HMG20B-204ENST00000417382 CLTAP09496 248 aa23.06■■□□□ 1.28
HMG20B-204ENST00000417382 CMA1P23946 247 aa23.06■■□□□ 1.28
HMG20B-204ENST00000417382 NDUFV1P49821 464 aa23.06■■□□□ 1.28
HMG20B-204ENST00000417382 NUCB2P80303 420 aa23.06■■□□□ 1.28
HMG20B-204ENST00000417382 DLX2Q07687 328 aaPredicted RBP23.06■■□□□ 1.28
HMG20B-204ENST00000417382 COASYQ13057 564 aa23.06■■□□□ 1.28
HMG20B-204ENST00000417382 PTPN14Q15678 1187 aa23.06■■□□□ 1.28
HMG20B-204ENST00000417382 CCDC65Q8IXS2 484 aa23.06■■□□□ 1.28
HMG20B-204ENST00000417382 ADAMTS19Q8TE59 1207 aa23.06■■□□□ 1.28
HMG20B-204ENST00000417382 DHX58Q96C10 678 aa23.06■■□□□ 1.28
HMG20B-204ENST00000417382 SPATA32Q96LK8 384 aa23.06■■□□□ 1.28
HMG20B-204ENST00000417382 TRIM9Q9C026 710 aa23.06■■□□□ 1.28
HMG20B-204ENST00000417382 MRPL44Q9H9J2 332 aaKnown RBP23.06■■□□□ 1.28
HMG20B-204ENST00000417382 CHST7Q9NS84 486 aa23.06■■□□□ 1.28
HMG20B-204ENST00000417382 CLEC1BQ9P126 229 aa23.06■■□□□ 1.28
HMG20B-204ENST00000417382 KCNH3Q9ULD8 1083 aa23.06■■□□□ 1.28
HMG20B-204ENST00000417382 STYXL1Q9Y6J8 313 aa23.06■■□□□ 1.28
HMG20B-204ENST00000417382 A0A0B4J269 797 aa23.05■■□□□ 1.28
HMG20B-204ENST00000417382 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.05■■□□□ 1.28
HMG20B-204ENST00000417382 GRXCR2A6NFK2 248 aa23.05■■□□□ 1.28
HMG20B-204ENST00000417382 TMEM189-UBE2V1I3L0A0 370 aa23.05■■□□□ 1.28
HMG20B-204ENST00000417382 DLL1O00548 723 aa23.05■■□□□ 1.28
HMG20B-204ENST00000417382 HERC4Q5GLZ8 1057 aaPredicted RBP23.05■■□□□ 1.28
HMG20B-204ENST00000417382 PTCRAQ6ISU1 281 aaPredicted RBP23.05■■□□□ 1.28
HMG20B-204ENST00000417382 EP400NLQ6ZTU2 488 aa23.05■■□□□ 1.28
HMG20B-204ENST00000417382 TSPAN18Q96SJ8 248 aa23.05■■□□□ 1.28
HMG20B-204ENST00000417382 C7orf25Q9BPX7 421 aa23.05■■□□□ 1.28
HMG20B-204ENST00000417382 HAPLN2Q9GZV7 340 aa23.05■■□□□ 1.28
HMG20B-204ENST00000417382 CXCL16Q9H2A7 254 aa23.05■■□□□ 1.28
HMG20B-204ENST00000417382 MRPL17Q9NRX2 175 aaKnown RBP23.05■■□□□ 1.28
HMG20B-204ENST00000417382 PANK4Q9NVE7 773 aa23.05■■□□□ 1.28
HMG20B-204ENST00000417382 CD207Q9UJ71 328 aa23.05■■□□□ 1.28
HMG20B-204ENST00000417382 PCDHB13Q9Y5F0 798 aa23.05■■□□□ 1.28
HMG20B-204ENST00000417382 FAM189A1O60320 539 aa23.04■■□□□ 1.28
HMG20B-204ENST00000417382 CLASP2O75122 1294 aaKnown RBP23.04■■□□□ 1.28
HMG20B-204ENST00000417382 TADA2AO75478 443 aa23.04■■□□□ 1.28
HMG20B-204ENST00000417382 IDEP14735 1019 aa23.04■■□□□ 1.28
HMG20B-204ENST00000417382 OSTNP61366 133 aa23.04■■□□□ 1.28
HMG20B-204ENST00000417382 POU5F1Q01860 360 aaKnown RBP23.04■■□□□ 1.28
HMG20B-204ENST00000417382 SMAD4Q13485 552 aaKnown RBP23.04■■□□□ 1.28
HMG20B-204ENST00000417382 SLC10A6Q3KNW5 377 aa23.04■■□□□ 1.28
HMG20B-204ENST00000417382 ZC2HC1CQ53FD0 456 aaPredicted RBP23.04■■□□□ 1.28
HMG20B-204ENST00000417382 SLFN12LQ6IEE8 588 aa23.04■■□□□ 1.28
HMG20B-204ENST00000417382 FUT10Q6P4F1 479 aa23.04■■□□□ 1.28
HMG20B-204ENST00000417382 SLC39A4Q6P5W5 647 aa23.04■■□□□ 1.28
HMG20B-204ENST00000417382 PPFIBP1Q86W92 1011 aa23.04■■□□□ 1.28
HMG20B-204ENST00000417382 VN1R2Q8NFZ6 395 aa23.04■■□□□ 1.28
HMG20B-204ENST00000417382 DDX27Q96GQ7 796 aaKnown RBP23.04■■□□□ 1.28
HMG20B-204ENST00000417382 EMILIN2Q9BXX0 1053 aa23.04■■□□□ 1.28
HMG20B-204ENST00000417382 EXOC7Q9UPT5 735 aa23.04■■□□□ 1.28
HMG20B-204ENST00000417382 SF3B1O75533 1304 aaKnown RBP eCLIP23.04■■□□□ 1.28
HMG20B-204ENST00000417382 CASTOR2A6NHX0 329 aa23.03■■□□□ 1.28
HMG20B-204ENST00000417382 OGTO15294 1046 aa23.03■■□□□ 1.28
HMG20B-204ENST00000417382 C1RP00736 705 aa23.03■■□□□ 1.28
HMG20B-204ENST00000417382 URODP06132 367 aa23.03■■□□□ 1.28
HMG20B-204ENST00000417382 ADRB2P07550 413 aa23.03■■□□□ 1.28
HMG20B-204ENST00000417382 HARSP12081 509 aaKnown RBP23.03■■□□□ 1.28
HMG20B-204ENST00000417382 HOXB8P17481 243 aaPredicted RBP23.03■■□□□ 1.28
HMG20B-204ENST00000417382 MATR3P43243 847 aaKnown RBP eCLIP23.03■■□□□ 1.28
HMG20B-204ENST00000417382 DSG1Q02413 1049 aa23.03■■□□□ 1.28
HMG20B-204ENST00000417382 ELAVL2Q12926 359 aaKnown RBP23.03■■□□□ 1.28
HMG20B-204ENST00000417382 USP41Q3LFD5 358 aa23.03■■□□□ 1.28
HMG20B-204ENST00000417382 L1TD1Q5T7N2 865 aaKnown RBP23.03■■□□□ 1.28
HMG20B-204ENST00000417382 KIAA0319Q5VV43 1072 aa23.03■■□□□ 1.28
HMG20B-204ENST00000417382 DCLRE1AQ6PJP8 1040 aa23.03■■□□□ 1.28
HMG20B-204ENST00000417382 SMRP1Q8NCR6 262 aa23.03■■□□□ 1.28
HMG20B-204ENST00000417382 CASP10Q92851 521 aa23.03■■□□□ 1.28
HMG20B-204ENST00000417382 UHRF1Q96T88 793 aaPredicted RBP23.03■■□□□ 1.28
HMG20B-204ENST00000417382 USP25Q9UHP3 1055 aa23.03■■□□□ 1.28
HMG20B-204ENST00000417382 FAM237AA0A1B0GTK4 181 aa23.02■■□□□ 1.28
HMG20B-204ENST00000417382 MEFVO15553 781 aaPredicted RBP23.02■■□□□ 1.28
HMG20B-204ENST00000417382 GLUD2P49448 558 aa23.02■■□□□ 1.28
HMG20B-204ENST00000417382 POSTNQ15063 836 aa23.02■■□□□ 1.28
HMG20B-204ENST00000417382 UPP1Q16831 310 aa23.02■■□□□ 1.28
HMG20B-204ENST00000417382 GLRA4Q5JXX5 417 aa23.02■■□□□ 1.28
HMG20B-204ENST00000417382 TMEM87AQ8NBN3 555 aa23.02■■□□□ 1.28
HMG20B-204ENST00000417382 ZMAT2Q96NC0 199 aaKnown RBP23.02■■□□□ 1.28
HMG20B-204ENST00000417382 ACCSQ96QU6 501 aa23.02■■□□□ 1.28
HMG20B-204ENST00000417382 PAAF1Q9BRP4 392 aa23.02■■□□□ 1.28
HMG20B-204ENST00000417382 MSTO1Q9BUK6 570 aa23.02■■□□□ 1.28
HMG20B-204ENST00000417382 GPR62Q9BZJ7 368 aa23.02■■□□□ 1.28
HMG20B-204ENST00000417382 RXFP1Q9HBX9 757 aa23.02■■□□□ 1.28
HMG20B-204ENST00000417382 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.02■■□□□ 1.28
HMG20B-204ENST00000417382 HPSEQ9Y251 543 aa23.02■■□□□ 1.28
HMG20B-204ENST00000417382 HCFC2Q9Y5Z7 792 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms