RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 SLC35C2Q9NQQ7 365 aa3.41□□□□□ -1.86
CTDSPL-203ENST00000416688 TCP11L1Q9NUJ3 509 aa3.41□□□□□ -1.86
CTDSPL-203ENST00000416688 FAM86C1Q9NVL1 165 aa3.41□□□□□ -1.86
CTDSPL-203ENST00000416688 TMEM51Q9NW97 253 aa3.41□□□□□ -1.86
CTDSPL-203ENST00000416688 COX16Q9P0S2 106 aa3.41□□□□□ -1.86
CTDSPL-203ENST00000416688 CACNG4Q9UBN1 327 aa3.41□□□□□ -1.86
CTDSPL-203ENST00000416688 ADAM30Q9UKF2 790 aa3.41□□□□□ -1.86
CTDSPL-203ENST00000416688 TBX20Q9UMR3 447 aa3.41□□□□□ -1.86
CTDSPL-203ENST00000416688 NOSIPQ9Y314 301 aaKnown RBP3.41□□□□□ -1.86
CTDSPL-203ENST00000416688 TMED5Q9Y3A6 229 aa3.41□□□□□ -1.86
CTDSPL-203ENST00000416688 EMC9Q9Y3B6 208 aa3.41□□□□□ -1.86
CTDSPL-203ENST00000416688 PCDHA8Q9Y5H6 950 aa3.41□□□□□ -1.86
CTDSPL-203ENST00000416688 ZNF804BA4D1E1 1349 aa3.41□□□□□ -1.86
CTDSPL-203ENST00000416688 ZCCHC6Q5VYS8 1495 aaKnown RBP3.41□□□□□ -1.86
CTDSPL-203ENST00000416688 TMEM94Q12767 1356 aa3.4□□□□□ -1.86
CTDSPL-203ENST00000416688 A0A088AWK7 358 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 ARPC4-TTLL3A0A0A6YYG9 625 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 RNF103-CHMP3A0A140T963 221 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 A0A1W2PPC4 97 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 CCDC78A2IDD5 438 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 CCDC151A5D8V7 595 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 ARVCFO00192 962 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 RNF103O00237 685 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 MEN1O00255 615 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 GFRA2O00451 464 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 UBE2CO00762 179 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 FSCN2O14926 492 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 RIPK2O43353 540 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 TBX1O43435 398 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 KDM1AO60341 852 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 EXOC3O60645 756 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 ADAMTS4O75173 837 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 RTN2O75298 545 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 CLEC3AO75596 197 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 B3GALT4O96024 378 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 ADH1BP00325 375 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 RPLP2P05387 115 aaKnown RBP3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 SNRPA1P09661 255 aaKnown RBP3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 RARBP10826 455 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 GZMAP12544 262 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 ALAS1P13196 640 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 NOS3P29474 1203 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 ADD1P35611 737 aaKnown RBP3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 SOX18P35713 384 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 THPOP40225 353 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 EPS15P42566 896 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 LMAN1P49257 510 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 MTNR1BP49286 362 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 RAD23AP54725 363 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 C21orf58P58505 322 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 ST5P78524 1137 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 DEUP1Q05D60 604 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 RALGDSQ12967 914 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 TRIM32Q13049 653 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 COASYQ13057 564 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 IKQ13123 557 aaPredicted RBP3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 CBX3Q13185 183 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 SLC12A1Q13621 1099 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 IKBKEQ14164 716 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 NTRK3Q16288 839 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 KYNUQ16719 465 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 RABL6Q3YEC7 729 aaPredicted RBP3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 CCDC40Q4G0X9 1142 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 AMOTQ4VCS5 1084 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 PAN2Q504Q3 1202 aaKnown RBP3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 WIPI1Q5MNZ9 446 aaPredicted RBP3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 FAM26FQ5R3K3 315 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 TTC39AQ5SRH9 613 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 KLHDC7AQ5VTJ3 777 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 NAA35Q5VZE5 725 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 DENND5AQ6IQ26 1287 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 FBXO38Q6PIJ6 1188 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 SLC30A9Q6PML9 568 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 PPP1R21Q6ZMI0 780 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 ZNF804AQ7Z570 1209 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 R3HCC1LQ7Z5L2 792 aaKnown RBP3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 CPLX4Q7Z7G2 160 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 RAB11FIP4Q86YS3 637 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 HERC6Q8IVU3 1022 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 CMIPQ8IY22 773 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 ELOA2Q8IYF1 753 aaPredicted RBP3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 MAML2Q8IZL2 1156 aaPredicted RBP3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 ADSSL1Q8N142 457 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 USHBP1Q8N6Y0 703 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 RNF152Q8N8N0 203 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 MARCH10Q8NA82 808 aaPredicted RBP3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 ATP11CQ8NB49 1132 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 TMEM145Q8NBT3 493 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 AGBL5Q8NDL9 886 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 IL17RDQ8NFM7 739 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 FAM71BQ8TC56 605 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 NOC3LQ8WTT2 800 aaKnown RBP3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 TGFBRAP1Q8WUH2 860 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 AUTS2Q8WXX7 1259 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 THAP4Q8WY91 577 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 KRT35Q92764 455 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 NXPE3Q969Y0 559 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 FAM162AQ96A26 154 aa3.4□□□□□ -1.87
CTDSPL-203ENST00000416688 FAM120BQ96EK7 910 aaKnown RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms