RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 COILP38432 576 aaPredicted RBP15.68■□□□□ 0.1
NCKIPSD-204ENST00000416649 WDR4P57081 412 aaKnown RBP15.68■□□□□ 0.1
NCKIPSD-204ENST00000416649 CYP4F22Q6NT55 531 aa15.68■□□□□ 0.1
NCKIPSD-204ENST00000416649 PPP1R21Q6ZMI0 780 aa15.68■□□□□ 0.1
NCKIPSD-204ENST00000416649 TRMT1LQ7Z2T5 733 aaKnown RBP15.68■□□□□ 0.1
NCKIPSD-204ENST00000416649 MTDHQ86UE4 582 aaKnown RBP15.68■□□□□ 0.1
NCKIPSD-204ENST00000416649 C9orf72Q96LT7 481 aa15.68■□□□□ 0.1
NCKIPSD-204ENST00000416649 KCTD10Q9H3F6 313 aa15.68■□□□□ 0.1
NCKIPSD-204ENST00000416649 MMADHCQ9H3L0 296 aaPredicted RBP15.68■□□□□ 0.1
NCKIPSD-204ENST00000416649 BCAS3Q9H6U6 928 aa15.68■□□□□ 0.1
NCKIPSD-204ENST00000416649 PFDN1O60925 122 aa15.67■□□□□ 0.1
NCKIPSD-204ENST00000416649 ECEL1O95672 775 aa15.67■□□□□ 0.1
NCKIPSD-204ENST00000416649 DLATP10515 647 aaKnown RBP15.67■□□□□ 0.1
NCKIPSD-204ENST00000416649 CCNFP41002 786 aa15.67■□□□□ 0.1
NCKIPSD-204ENST00000416649 MYBPC3Q14896 1274 aa15.67■□□□□ 0.1
NCKIPSD-204ENST00000416649 CMPK2Q5EBM0 449 aa15.67■□□□□ 0.1
NCKIPSD-204ENST00000416649 ACSBG2Q5FVE4 666 aa15.67■□□□□ 0.1
NCKIPSD-204ENST00000416649 SLC30A10Q6XR72 485 aa15.67■□□□□ 0.1
NCKIPSD-204ENST00000416649 VPS52Q8N1B4 723 aa15.67■□□□□ 0.1
NCKIPSD-204ENST00000416649 NPHS2Q9NP85 383 aa15.67■□□□□ 0.1
NCKIPSD-204ENST00000416649 MTUS1Q9ULD2 1270 aa15.67■□□□□ 0.1
NCKIPSD-204ENST00000416649 CFAP69A5D8W1 941 aa15.67■□□□□ 0.1
NCKIPSD-204ENST00000416649 LDHCP07864 332 aa15.67■□□□□ 0.1
NCKIPSD-204ENST00000416649 TMEM253P0C7T8 217 aa15.67■□□□□ 0.1
NCKIPSD-204ENST00000416649 PTPN4P29074 926 aa15.67■□□□□ 0.1
NCKIPSD-204ENST00000416649 NEK3P51956 506 aa15.67■□□□□ 0.1
NCKIPSD-204ENST00000416649 GSTO1P78417 241 aa15.67■□□□□ 0.1
NCKIPSD-204ENST00000416649 CAPN12Q6ZSI9 719 aa15.67■□□□□ 0.1
NCKIPSD-204ENST00000416649 CPNE8Q86YQ8 564 aa15.67■□□□□ 0.1
NCKIPSD-204ENST00000416649 SP8Q8IXZ3 490 aa15.67■□□□□ 0.1
NCKIPSD-204ENST00000416649 PIGSQ96S52 555 aa15.67■□□□□ 0.1
NCKIPSD-204ENST00000416649 MIPEPQ99797 713 aa15.67■□□□□ 0.1
NCKIPSD-204ENST00000416649 DAGLAQ9Y4D2 1042 aa15.67■□□□□ 0.1
NCKIPSD-204ENST00000416649 WDR91A4D1P6 747 aa15.67■□□□□ 0.1
NCKIPSD-204ENST00000416649 AKAP3O75969 853 aa15.67■□□□□ 0.1
NCKIPSD-204ENST00000416649 PYGMP11217 842 aa15.67■□□□□ 0.1
NCKIPSD-204ENST00000416649 NPR1P16066 1061 aa15.67■□□□□ 0.1
NCKIPSD-204ENST00000416649 LMNB1P20700 586 aa15.67■□□□□ 0.1
NCKIPSD-204ENST00000416649 KRT17Q04695 432 aa15.67■□□□□ 0.1
NCKIPSD-204ENST00000416649 NCAPG2Q86XI2 1143 aa15.67■□□□□ 0.1
NCKIPSD-204ENST00000416649 C4orf33Q8N1A6 199 aa15.67■□□□□ 0.1
NCKIPSD-204ENST00000416649 PTPRN2Q92932 1015 aa15.67■□□□□ 0.1
NCKIPSD-204ENST00000416649 MTMR9Q96QG7 549 aa15.67■□□□□ 0.1
NCKIPSD-204ENST00000416649 ZWILCHQ9H900 591 aa15.67■□□□□ 0.1
NCKIPSD-204ENST00000416649 AAASQ9NRG9 546 aa15.67■□□□□ 0.1
NCKIPSD-204ENST00000416649 PCYOX1Q9UHG3 505 aa15.67■□□□□ 0.1
NCKIPSD-204ENST00000416649 POTEB3A0JP26 581 aa15.66■□□□□ 0.1
NCKIPSD-204ENST00000416649 FAM47DPA6NHR8 397 aa15.66■□□□□ 0.1
NCKIPSD-204ENST00000416649 SIGLEC16A6NMB1 481 aa15.66■□□□□ 0.1
NCKIPSD-204ENST00000416649 POTECB2RU33 542 aa15.66■□□□□ 0.1
NCKIPSD-204ENST00000416649 ZSCAN9O15535 394 aaPredicted RBP15.66■□□□□ 0.1
NCKIPSD-204ENST00000416649 TTC4O95801 387 aa15.66■□□□□ 0.1
NCKIPSD-204ENST00000416649 SETSIPP0DME0 302 aa15.66■□□□□ 0.1
NCKIPSD-204ENST00000416649 IL1R1P14778 569 aa15.66■□□□□ 0.1
NCKIPSD-204ENST00000416649 GIT2Q14161 759 aa15.66■□□□□ 0.1
NCKIPSD-204ENST00000416649 DRAP1Q14919 205 aaPredicted RBP15.66■□□□□ 0.1
NCKIPSD-204ENST00000416649 ZNF746Q6NUN9 644 aaPredicted RBP15.66■□□□□ 0.1
NCKIPSD-204ENST00000416649 POTEBQ6S5H4 581 aa15.66■□□□□ 0.1
NCKIPSD-204ENST00000416649 CEP128Q6ZU80 1094 aa15.66■□□□□ 0.1
NCKIPSD-204ENST00000416649 CCDC125Q86Z20 511 aa15.66■□□□□ 0.1
NCKIPSD-204ENST00000416649 TIPINQ9BVW5 301 aa15.66■□□□□ 0.1
NCKIPSD-204ENST00000416649 IKZF4Q9H2S9 585 aa15.66■□□□□ 0.1
NCKIPSD-204ENST00000416649 PCDHA3Q9Y5H8 950 aa15.66■□□□□ 0.1
NCKIPSD-204ENST00000416649 WASF2Q9Y6W5 498 aa15.66■□□□□ 0.1
NCKIPSD-204ENST00000416649 ATMINO43313 823 aaPredicted RBP15.66■□□□□ 0.1
NCKIPSD-204ENST00000416649 PLA2G4BP0C869 781 aa15.66■□□□□ 0.1
NCKIPSD-204ENST00000416649 TAL1P17542 331 aaPredicted RBP15.66■□□□□ 0.1
NCKIPSD-204ENST00000416649 MARSP56192 900 aaKnown RBP15.66■□□□□ 0.1
NCKIPSD-204ENST00000416649 SLC34A1Q06495 639 aa15.66■□□□□ 0.1
NCKIPSD-204ENST00000416649 OVGP1Q12889 678 aa15.66■□□□□ 0.1
NCKIPSD-204ENST00000416649 EPHA7Q15375 998 aa15.66■□□□□ 0.1
NCKIPSD-204ENST00000416649 CFAP157Q5JU67 520 aa15.66■□□□□ 0.1
NCKIPSD-204ENST00000416649 DPY19L2P1Q6NXN4 242 aa15.66■□□□□ 0.1
NCKIPSD-204ENST00000416649 ZNF365Q70YC5 407 aa15.66■□□□□ 0.1
NCKIPSD-204ENST00000416649 CADM1Q9BY67 442 aaKnown RBP15.66■□□□□ 0.1
NCKIPSD-204ENST00000416649 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.66■□□□□ 0.1
NCKIPSD-204ENST00000416649 PDP2Q9P2J9 529 aa15.66■□□□□ 0.1
NCKIPSD-204ENST00000416649 ATXN10Q9UBB4 475 aa15.66■□□□□ 0.1
NCKIPSD-204ENST00000416649 H0YIN7 160 aa15.65■□□□□ 0.1
NCKIPSD-204ENST00000416649 GYG2O15488 501 aa15.65■□□□□ 0.1
NCKIPSD-204ENST00000416649 SPOPO43791 374 aa15.65■□□□□ 0.1
NCKIPSD-204ENST00000416649 EYA4O95677 639 aa15.65■□□□□ 0.1
NCKIPSD-204ENST00000416649 SPATA31D3P0C874 917 aa15.65■□□□□ 0.1
NCKIPSD-204ENST00000416649 FXR2P51116 673 aaKnown RBP eCLIP15.65■□□□□ 0.1
NCKIPSD-204ENST00000416649 UBE2SQ16763 222 aa15.65■□□□□ 0.1
NCKIPSD-204ENST00000416649 HP1BP3Q5SSJ5 553 aaPredicted RBP15.65■□□□□ 0.1
NCKIPSD-204ENST00000416649 ACBD5Q5T8D3 534 aaPredicted RBP15.65■□□□□ 0.1
NCKIPSD-204ENST00000416649 SPATA31D4Q6ZUB0 917 aa15.65■□□□□ 0.1
NCKIPSD-204ENST00000416649 NLRP9Q7RTR0 991 aa15.65■□□□□ 0.1
NCKIPSD-204ENST00000416649 KBTBD2Q8IY47 623 aa15.65■□□□□ 0.1
NCKIPSD-204ENST00000416649 ANKRD35Q8N283 1001 aa15.65■□□□□ 0.1
NCKIPSD-204ENST00000416649 PDCD7Q8N8D1 485 aaKnown RBP15.65■□□□□ 0.1
NCKIPSD-204ENST00000416649 BTBD6Q96KE9 485 aa15.65■□□□□ 0.1
NCKIPSD-204ENST00000416649 SIX2Q9NPC8 291 aa15.65■□□□□ 0.1
NCKIPSD-204ENST00000416649 DDX4Q9NQI0 724 aaKnown RBP15.65■□□□□ 0.1
NCKIPSD-204ENST00000416649 STARD13Q9Y3M8 1113 aa15.65■□□□□ 0.1
NCKIPSD-204ENST00000416649 POC1B-GALNT4F8VUJ3 575 aa15.65■□□□□ 0.1
NCKIPSD-204ENST00000416649 HNRNPRO43390 633 aaKnown RBP15.65■□□□□ 0.1
NCKIPSD-204ENST00000416649 ATP6V1G1O75348 118 aa15.65■□□□□ 0.1
NCKIPSD-204ENST00000416649 CYP1A1P04798 512 aaPredicted RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms