RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 MYCLP12524 364 aaPredicted RBP6.89□□□□□ -1.31
LMBR1-204ENST00000415428 RPL9P32969 192 aaKnown RBP6.89□□□□□ -1.31
LMBR1-204ENST00000415428 MPLP40238 635 aa6.89□□□□□ -1.31
LMBR1-204ENST00000415428 MLLT3P42568 568 aaPredicted RBP6.89□□□□□ -1.31
LMBR1-204ENST00000415428 SMAD1Q15797 465 aaKnown RBP6.89□□□□□ -1.31
LMBR1-204ENST00000415428 PAN2Q504Q3 1202 aaKnown RBP6.89□□□□□ -1.31
LMBR1-204ENST00000415428 RNF43Q68DV7 783 aa6.89□□□□□ -1.31
LMBR1-204ENST00000415428 PPP4R3AQ6IN85 833 aa6.89□□□□□ -1.31
LMBR1-204ENST00000415428 C12orf76Q8N812 135 aaPredicted RBP6.89□□□□□ -1.31
LMBR1-204ENST00000415428 ANO3Q9BYT9 981 aa6.89□□□□□ -1.31
LMBR1-204ENST00000415428 NXF3Q9H4D5 531 aaKnown RBP6.89□□□□□ -1.31
LMBR1-204ENST00000415428 ANKEF1Q9NU02 776 aa6.89□□□□□ -1.31
LMBR1-204ENST00000415428 FAM86B1E9PN63 330 aa6.88□□□□□ -1.31
LMBR1-204ENST00000415428 ERVH48-1M5A8F1 160 aa6.88□□□□□ -1.31
LMBR1-204ENST00000415428 FAM86B2P0C5J1 330 aa6.88□□□□□ -1.31
LMBR1-204ENST00000415428 LRPAP1P30533 357 aa6.88□□□□□ -1.31
LMBR1-204ENST00000415428 MCCD1P59942 119 aaPredicted RBP6.88□□□□□ -1.31
LMBR1-204ENST00000415428 BYSLQ13895 437 aaKnown RBP6.88□□□□□ -1.31
LMBR1-204ENST00000415428 GAB4Q2WGN9 574 aa6.88□□□□□ -1.31
LMBR1-204ENST00000415428 EFCAB12Q6NXP0 572 aa6.88□□□□□ -1.31
LMBR1-204ENST00000415428 ANKS3Q6ZW76 656 aa6.88□□□□□ -1.31
LMBR1-204ENST00000415428 EXOC6Q8TAG9 804 aa6.88□□□□□ -1.31
LMBR1-204ENST00000415428 RIN2Q8WYP3 895 aaPredicted RBP6.88□□□□□ -1.31
LMBR1-204ENST00000415428 PTPRHQ9HD43 1115 aa6.88□□□□□ -1.31
LMBR1-204ENST00000415428 CDH22Q9UJ99 828 aa6.88□□□□□ -1.31
LMBR1-204ENST00000415428 A0A0C4DFX4 3053 aa6.88□□□□□ -1.31
LMBR1-204ENST00000415428 ATF2P15336 505 aa6.88□□□□□ -1.31
LMBR1-204ENST00000415428 ZNF132P52740 706 aa6.88□□□□□ -1.31
LMBR1-204ENST00000415428 ZNF252P-AS1Q0IIN9 211 aa6.88□□□□□ -1.31
LMBR1-204ENST00000415428 MXD4Q14582 209 aaPredicted RBP6.88□□□□□ -1.31
LMBR1-204ENST00000415428 PFKFB3Q16875 520 aaPredicted RBP6.88□□□□□ -1.31
LMBR1-204ENST00000415428 FAM78AQ5JUQ0 283 aa6.88□□□□□ -1.31
LMBR1-204ENST00000415428 IL31Q6EBC2 164 aa6.88□□□□□ -1.31
LMBR1-204ENST00000415428 LURAP1LQ8IV03 231 aa6.88□□□□□ -1.31
LMBR1-204ENST00000415428 FAM131CQ96AQ9 280 aa6.88□□□□□ -1.31
LMBR1-204ENST00000415428 DDX27Q96GQ7 796 aaKnown RBP6.88□□□□□ -1.31
LMBR1-204ENST00000415428 OSMRQ99650 979 aa6.88□□□□□ -1.31
LMBR1-204ENST00000415428 TTPALQ9BTX7 342 aa6.88□□□□□ -1.31
LMBR1-204ENST00000415428 AFF4Q9UHB7 1163 aaKnown RBP6.88□□□□□ -1.31
LMBR1-204ENST00000415428 STARD13Q9Y3M8 1113 aa6.88□□□□□ -1.31
LMBR1-204ENST00000415428 CD59P13987 128 aa6.88□□□□□ -1.31
LMBR1-204ENST00000415428 C19orf57Q0VDD7 668 aa6.88□□□□□ -1.31
LMBR1-204ENST00000415428 FSTL4Q6MZW2 842 aa6.88□□□□□ -1.31
LMBR1-204ENST00000415428 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.88□□□□□ -1.31
LMBR1-204ENST00000415428 ZNF461Q8TAF7 563 aa6.88□□□□□ -1.31
LMBR1-204ENST00000415428 MYRFLQ96LU7 910 aa6.88□□□□□ -1.31
LMBR1-204ENST00000415428 TMEM206Q9H813 350 aa6.88□□□□□ -1.31
LMBR1-204ENST00000415428 TMEM9BQ9NQ34 198 aa6.88□□□□□ -1.31
LMBR1-204ENST00000415428 CNTN3Q9P232 1028 aa6.88□□□□□ -1.31
LMBR1-204ENST00000415428 USP18Q9UMW8 372 aa6.88□□□□□ -1.31
LMBR1-204ENST00000415428 IPPQ9Y573 584 aa6.88□□□□□ -1.31
LMBR1-204ENST00000415428 ABLIM1O14639 778 aa6.87□□□□□ -1.31
LMBR1-204ENST00000415428 NOL4O94818 638 aa6.87□□□□□ -1.31
LMBR1-204ENST00000415428 OLFM2O95897 454 aa6.87□□□□□ -1.31
LMBR1-204ENST00000415428 TYMPP19971 482 aa6.87□□□□□ -1.31
LMBR1-204ENST00000415428 MRPS21P82921 87 aaKnown RBP6.87□□□□□ -1.31
LMBR1-204ENST00000415428 UPP1Q16831 310 aa6.87□□□□□ -1.31
LMBR1-204ENST00000415428 UTP14CQ5TAP6 766 aaKnown RBP6.87□□□□□ -1.31
LMBR1-204ENST00000415428 SMYD5Q6GMV2 418 aa6.87□□□□□ -1.31
LMBR1-204ENST00000415428 ABI1Q8IZP0 508 aa6.87□□□□□ -1.31
LMBR1-204ENST00000415428 ZNF276Q8N554 614 aa6.87□□□□□ -1.31
LMBR1-204ENST00000415428 PPP1R13LQ8WUF5 828 aa6.87□□□□□ -1.31
LMBR1-204ENST00000415428 RPP25Q9BUL9 199 aaKnown RBP6.87□□□□□ -1.31
LMBR1-204ENST00000415428 TPX2Q9ULW0 747 aaKnown RBP6.87□□□□□ -1.31
LMBR1-204ENST00000415428 DNAH14Q0VDD8 3507 aa6.87□□□□□ -1.31
LMBR1-204ENST00000415428 THADAQ6YHU6 1953 aa6.87□□□□□ -1.31
LMBR1-204ENST00000415428 TRIM66O15016 1216 aa6.87□□□□□ -1.31
LMBR1-204ENST00000415428 APBB3O95704 486 aa6.87□□□□□ -1.31
LMBR1-204ENST00000415428 SERPINF2P08697 491 aa6.87□□□□□ -1.31
LMBR1-204ENST00000415428 CTHP32929 405 aa6.87□□□□□ -1.31
LMBR1-204ENST00000415428 P2RY2P41231 377 aa6.87□□□□□ -1.31
LMBR1-204ENST00000415428 ILKQ13418 452 aa6.87□□□□□ -1.31
LMBR1-204ENST00000415428 DCAF4L1Q3SXM0 396 aa6.87□□□□□ -1.31
LMBR1-204ENST00000415428 TMC5Q6UXY8 1006 aa6.87□□□□□ -1.31
LMBR1-204ENST00000415428 RBBP8NLQ8NC74 664 aaPredicted RBP6.87□□□□□ -1.31
LMBR1-204ENST00000415428 SMARCC2Q8TAQ2 1214 aa6.87□□□□□ -1.31
LMBR1-204ENST00000415428 ACDQ96AP0 544 aa6.87□□□□□ -1.31
LMBR1-204ENST00000415428 P2RY13Q9BPV8 354 aa6.87□□□□□ -1.31
LMBR1-204ENST00000415428 IRX2Q9BZI1 471 aaPredicted RBP6.87□□□□□ -1.31
LMBR1-204ENST00000415428 TOR4AQ9NXH8 423 aa6.87□□□□□ -1.31
LMBR1-204ENST00000415428 CITO14578 2027 aa6.87□□□□□ -1.31
LMBR1-204ENST00000415428 SPECC1L-ADORA2AF8WAN1 911 aa6.86□□□□□ -1.31
LMBR1-204ENST00000415428 H7C4K7 107 aa6.86□□□□□ -1.31
LMBR1-204ENST00000415428 RECQL4O94761 1208 aa6.86□□□□□ -1.31
LMBR1-204ENST00000415428 GOLGA8HP0CJ92 632 aa6.86□□□□□ -1.31
LMBR1-204ENST00000415428 PDGFRLQ15198 375 aa6.86□□□□□ -1.31
LMBR1-204ENST00000415428 ZBTB6Q15916 424 aa6.86□□□□□ -1.31
LMBR1-204ENST00000415428 SLC5A9Q2M3M2 681 aa6.86□□□□□ -1.31
LMBR1-204ENST00000415428 NOTUMQ6P988 496 aa6.86□□□□□ -1.31
LMBR1-204ENST00000415428 FERMT3Q86UX7 667 aa6.86□□□□□ -1.31
LMBR1-204ENST00000415428 ITFG1Q8TB96 612 aa6.86□□□□□ -1.31
LMBR1-204ENST00000415428 DNASE2BQ8WZ79 361 aa6.86□□□□□ -1.31
LMBR1-204ENST00000415428 FAM227BQ96M60 508 aa6.86□□□□□ -1.31
LMBR1-204ENST00000415428 FAM20AQ96MK3 541 aa6.86□□□□□ -1.31
LMBR1-204ENST00000415428 TRMT61BQ9BVS5 477 aaKnown RBP6.86□□□□□ -1.31
LMBR1-204ENST00000415428 ACSL6Q9UKU0 697 aa6.86□□□□□ -1.31
LMBR1-204ENST00000415428 PCDHB8Q9UN66 801 aa6.86□□□□□ -1.31
LMBR1-204ENST00000415428 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.86□□□□□ -1.31
LMBR1-204ENST00000415428 PTGESO14684 152 aa6.86□□□□□ -1.31
LMBR1-204ENST00000415428 RPP40O75818 363 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms