RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 AGO4Q9HCK5 861 aaKnown RBP12.7□□□□□ -0.38
PTPRF-205ENST00000414879 AGPAT3Q9NRZ7 376 aa12.7□□□□□ -0.38
PTPRF-205ENST00000414879 MORC2Q9Y6X9 1032 aaPredicted RBP12.7□□□□□ -0.38
PTPRF-205ENST00000414879 MYBP10242 640 aa12.7□□□□□ -0.38
PTPRF-205ENST00000414879 KRT3P12035 628 aa12.7□□□□□ -0.38
PTPRF-205ENST00000414879 HSD17B4P51659 736 aa12.7□□□□□ -0.38
PTPRF-205ENST00000414879 RAD51Q06609 339 aa12.7□□□□□ -0.38
PTPRF-205ENST00000414879 FMR1Q06787 632 aaKnown RBP eCLIP12.7□□□□□ -0.38
PTPRF-205ENST00000414879 PPIL2Q13356 520 aa12.7□□□□□ -0.38
PTPRF-205ENST00000414879 DRP2Q13474 957 aa12.7□□□□□ -0.38
PTPRF-205ENST00000414879 RNF219Q5W0B1 726 aaPredicted RBP12.7□□□□□ -0.38
PTPRF-205ENST00000414879 ATG16L1Q676U5 607 aa12.7□□□□□ -0.38
PTPRF-205ENST00000414879 RAPH1Q70E73 1250 aa12.7□□□□□ -0.38
PTPRF-205ENST00000414879 SPIRE2Q8WWL2 714 aa12.7□□□□□ -0.38
PTPRF-205ENST00000414879 RSRC1Q96IZ7 334 aaKnown RBP12.7□□□□□ -0.38
PTPRF-205ENST00000414879 SENP7Q9BQF6 1050 aa12.7□□□□□ -0.38
PTPRF-205ENST00000414879 FBXO28Q9NVF7 368 aa12.7□□□□□ -0.38
PTPRF-205ENST00000414879 KLHL8Q9P2G9 620 aaPredicted RBP12.7□□□□□ -0.38
PTPRF-205ENST00000414879 SLC37A4O43826 429 aa12.69□□□□□ -0.38
PTPRF-205ENST00000414879 GPC4O75487 556 aa12.69□□□□□ -0.38
PTPRF-205ENST00000414879 MX2P20592 715 aa12.69□□□□□ -0.38
PTPRF-205ENST00000414879 MICAL1Q8TDZ2 1067 aa12.69□□□□□ -0.38
PTPRF-205ENST00000414879 IL17RBQ9NRM6 502 aa12.69□□□□□ -0.38
PTPRF-205ENST00000414879 CXCR5P32302 372 aa12.69□□□□□ -0.38
PTPRF-205ENST00000414879 HERVK_113P62684 666 aa12.69□□□□□ -0.38
PTPRF-205ENST00000414879 PPP2R5CQ13362 524 aa12.69□□□□□ -0.38
PTPRF-205ENST00000414879 TAF1BQ53T94 588 aaPredicted RBP12.69□□□□□ -0.38
PTPRF-205ENST00000414879 GNASQ5JWF2 1037 aa12.69□□□□□ -0.38
PTPRF-205ENST00000414879 HEATR6Q6AI08 1181 aaKnown RBP12.69□□□□□ -0.38
PTPRF-205ENST00000414879 SPATA2LQ8IUW3 424 aaPredicted RBP12.69□□□□□ -0.38
PTPRF-205ENST00000414879 RBBP8NLQ8NC74 664 aaPredicted RBP12.69□□□□□ -0.38
PTPRF-205ENST00000414879 FRMD8P1Q9BZ68 369 aaPredicted RBP12.69□□□□□ -0.38
PTPRF-205ENST00000414879 RASSF4Q9H2L5 321 aa12.69□□□□□ -0.38
PTPRF-205ENST00000414879 PDE11AQ9HCR9 933 aa12.69□□□□□ -0.38
PTPRF-205ENST00000414879 UBE2Q2LH0YL09 131 aa12.69□□□□□ -0.38
PTPRF-205ENST00000414879 VWA5AO00534 786 aa12.69□□□□□ -0.38
PTPRF-205ENST00000414879 NOL3O60936 208 aaKnown RBP12.69□□□□□ -0.38
PTPRF-205ENST00000414879 PPP6R3Q5H9R7 873 aaPredicted RBP12.69□□□□□ -0.38
PTPRF-205ENST00000414879 KIRREL3Q8IZU9 778 aa12.69□□□□□ -0.38
PTPRF-205ENST00000414879 GDAP1L1Q96MZ0 367 aa12.69□□□□□ -0.38
PTPRF-205ENST00000414879 ZNF518BQ9C0D4 1074 aa12.69□□□□□ -0.38
PTPRF-205ENST00000414879 RANBP17Q9H2T7 1088 aaKnown RBP12.69□□□□□ -0.38
PTPRF-205ENST00000414879 TOM1L1O75674 476 aa12.69□□□□□ -0.38
PTPRF-205ENST00000414879 HLA-DRAP01903 254 aa12.69□□□□□ -0.38
PTPRF-205ENST00000414879 RHBDL3P58872 404 aa12.69□□□□□ -0.38
PTPRF-205ENST00000414879 BBS9Q3SYG4 887 aa12.69□□□□□ -0.38
PTPRF-205ENST00000414879 RYBPQ8N488 228 aaPredicted RBP12.69□□□□□ -0.38
PTPRF-205ENST00000414879 ARHGEF2Q92974 986 aaKnown RBP12.69□□□□□ -0.38
PTPRF-205ENST00000414879 UBN1Q9NPG3 1134 aa12.69□□□□□ -0.38
PTPRF-205ENST00000414879 NPHP3-ACAD11A0A0J9YXS1 232 aa12.68□□□□□ -0.38
PTPRF-205ENST00000414879 PIK3CDO00329 1044 aa12.68□□□□□ -0.38
PTPRF-205ENST00000414879 ATICP31939 592 aa12.68□□□□□ -0.38
PTPRF-205ENST00000414879 CDO1Q16878 200 aa12.68□□□□□ -0.38
PTPRF-205ENST00000414879 EFHC1Q5JVL4 640 aa12.68□□□□□ -0.38
PTPRF-205ENST00000414879 KLHDC7AQ5VTJ3 777 aa12.68□□□□□ -0.38
PTPRF-205ENST00000414879 RWDD4Q6NW29 188 aaKnown RBP12.68□□□□□ -0.38
PTPRF-205ENST00000414879 NT5DC4Q86YG4 428 aa12.68□□□□□ -0.38
PTPRF-205ENST00000414879 CCDC197Q8NCU1 140 aa12.68□□□□□ -0.38
PTPRF-205ENST00000414879 PRPF31Q8WWY3 499 aaKnown RBP12.68□□□□□ -0.38
PTPRF-205ENST00000414879 KRT35Q92764 455 aa12.68□□□□□ -0.38
PTPRF-205ENST00000414879 FRMD8Q9BZ67 464 aaPredicted RBP12.68□□□□□ -0.38
PTPRF-205ENST00000414879 FARP1Q9Y4F1 1045 aaPredicted RBP12.68□□□□□ -0.38
PTPRF-205ENST00000414879 MTSS1O43312 755 aa12.68□□□□□ -0.38
PTPRF-205ENST00000414879 CCDC144BQ3MJ40 725 aa12.68□□□□□ -0.38
PTPRF-205ENST00000414879 CENPPQ6IPU0 288 aa12.68□□□□□ -0.38
PTPRF-205ENST00000414879 USP49Q70CQ1 688 aa12.68□□□□□ -0.38
PTPRF-205ENST00000414879 BCAS4Q8TDM0 211 aa12.68□□□□□ -0.38
PTPRF-205ENST00000414879 SLC5A5Q92911 643 aa12.68□□□□□ -0.38
PTPRF-205ENST00000414879 AAASQ9NRG9 546 aa12.68□□□□□ -0.38
PTPRF-205ENST00000414879 BFARQ9NZS9 450 aa12.68□□□□□ -0.38
PTPRF-205ENST00000414879 CYP26A1O43174 497 aa12.68□□□□□ -0.38
PTPRF-205ENST00000414879 FGRP09769 529 aa12.68□□□□□ -0.38
PTPRF-205ENST00000414879 CPB1P15086 417 aa12.68□□□□□ -0.38
PTPRF-205ENST00000414879 TAC1P20366 129 aa12.68□□□□□ -0.38
PTPRF-205ENST00000414879 TAF6P49848 677 aa12.68□□□□□ -0.38
PTPRF-205ENST00000414879 STX1BP61266 288 aa12.68□□□□□ -0.38
PTPRF-205ENST00000414879 NOP14P78316 857 aaKnown RBP12.68□□□□□ -0.38
PTPRF-205ENST00000414879 ROR1Q01973 937 aa12.68□□□□□ -0.38
PTPRF-205ENST00000414879 BFSP2Q13515 415 aa12.68□□□□□ -0.38
PTPRF-205ENST00000414879 CYP4F22Q6NT55 531 aa12.68□□□□□ -0.38
PTPRF-205ENST00000414879 LMNTD2Q8IXW0 634 aa12.68□□□□□ -0.38
PTPRF-205ENST00000414879 ATL2Q8NHH9 583 aa12.68□□□□□ -0.38
PTPRF-205ENST00000414879 MGARPQ8TDB4 240 aa12.68□□□□□ -0.38
PTPRF-205ENST00000414879 ANGPTL3Q9Y5C1 460 aa12.68□□□□□ -0.38
PTPRF-205ENST00000414879 AK9Q5TCS8 1911 aa12.68□□□□□ -0.38
PTPRF-205ENST00000414879 DPYSL4O14531 572 aa12.68□□□□□ -0.38
PTPRF-205ENST00000414879 TOB1P50616 345 aaPredicted RBP12.68□□□□□ -0.38
PTPRF-205ENST00000414879 CASP8Q14790 479 aa12.68□□□□□ -0.38
PTPRF-205ENST00000414879 PHLDB3Q6NSJ2 640 aa12.68□□□□□ -0.38
PTPRF-205ENST00000414879 MPZL3Q6UWV2 235 aa12.68□□□□□ -0.38
PTPRF-205ENST00000414879 ATP8B4Q8TF62 1192 aa12.68□□□□□ -0.38
PTPRF-205ENST00000414879 OPTNQ96CV9 577 aa12.68□□□□□ -0.38
PTPRF-205ENST00000414879 CYP3A43Q9HB55 503 aa12.68□□□□□ -0.38
PTPRF-205ENST00000414879 SENP1Q9P0U3 644 aa12.68□□□□□ -0.38
PTPRF-205ENST00000414879 SNX12Q9UMY4 172 aa12.68□□□□□ -0.38
PTPRF-205ENST00000414879 LOC102724159A0A0B4J2E5 919 aa12.67□□□□□ -0.38
PTPRF-205ENST00000414879 AXLP30530 894 aa12.67□□□□□ -0.38
PTPRF-205ENST00000414879 CCT5P48643 541 aa12.67□□□□□ -0.38
PTPRF-205ENST00000414879 PWP2Q15269 919 aaKnown RBP12.67□□□□□ -0.38
PTPRF-205ENST00000414879 PLA2G4FQ68DD2 849 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms