RNA–Protein interactions for RNA: ENST00000411938.1

LSM8-202, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM8, Length 290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-202ENST00000411938 Q6ZS52 159 aa7.72□□□□□ -1.17
LSM8-202ENST00000411938 PDZD3Q86UT5 571 aa7.72□□□□□ -1.17
LSM8-202ENST00000411938 WDR5BQ86VZ2 330 aa7.72□□□□□ -1.17
LSM8-202ENST00000411938 CEP57Q86XR8 500 aa7.72□□□□□ -1.17
LSM8-202ENST00000411938 CNNM3Q8NE01 707 aa7.72□□□□□ -1.17
LSM8-202ENST00000411938 GAB3Q8WWW8 586 aa7.72□□□□□ -1.17
LSM8-202ENST00000411938 TCEAL3Q969E4 200 aa7.72□□□□□ -1.17
LSM8-202ENST00000411938 TRIM44Q96DX7 344 aaPredicted RBP7.72□□□□□ -1.17
LSM8-202ENST00000411938 INTS4Q96HW7 963 aaKnown RBP7.72□□□□□ -1.17
LSM8-202ENST00000411938 TMX3Q96JJ7 454 aa7.72□□□□□ -1.17
LSM8-202ENST00000411938 ZFP42Q96MM3 310 aa7.72□□□□□ -1.17
LSM8-202ENST00000411938 PPP1R9BQ96SB3 815 aa7.72□□□□□ -1.17
LSM8-202ENST00000411938 CLSTN3Q9BQT9 956 aa7.72□□□□□ -1.17
LSM8-202ENST00000411938 APOL6Q9BWW8 343 aa7.72□□□□□ -1.17
LSM8-202ENST00000411938 RNF39Q9H2S5 420 aa7.72□□□□□ -1.17
LSM8-202ENST00000411938 ZFP14Q9HCL3 533 aa7.72□□□□□ -1.17
LSM8-202ENST00000411938 DISC1Q9NRI5 854 aa7.72□□□□□ -1.17
LSM8-202ENST00000411938 SEPT9Q9UHD8 586 aaPredicted RBP7.72□□□□□ -1.17
LSM8-202ENST00000411938 ADAM28Q9UKQ2 775 aa7.72□□□□□ -1.17
LSM8-202ENST00000411938 PCDHGA5Q9Y5G8 931 aa7.72□□□□□ -1.17
LSM8-202ENST00000411938 U3KPZ7 1027 aaPredicted RBP7.72□□□□□ -1.17
LSM8-202ENST00000411938 TMEM150BA6NC51 233 aa7.71□□□□□ -1.18
LSM8-202ENST00000411938 SMCO2A6NFE2 343 aa7.71□□□□□ -1.18
LSM8-202ENST00000411938 ESPNB1AK53 854 aa7.71□□□□□ -1.18
LSM8-202ENST00000411938 CHMP2AO43633 222 aa7.71□□□□□ -1.18
LSM8-202ENST00000411938 HYAL3O43820 417 aaPredicted RBP7.71□□□□□ -1.18
LSM8-202ENST00000411938 RHOP08100 348 aa7.71□□□□□ -1.18
LSM8-202ENST00000411938 CYP21A2P08686 494 aa7.71□□□□□ -1.18
LSM8-202ENST00000411938 CEACAM1P13688 526 aa7.71□□□□□ -1.18
LSM8-202ENST00000411938 CEBPBP17676 345 aa7.71□□□□□ -1.18
LSM8-202ENST00000411938 HOXA6P31267 233 aa7.71□□□□□ -1.18
LSM8-202ENST00000411938 RAP1GAPP47736 663 aa7.71□□□□□ -1.18
LSM8-202ENST00000411938 PXNP49023 591 aaPredicted RBP7.71□□□□□ -1.18
LSM8-202ENST00000411938 NEK4P51957 841 aa7.71□□□□□ -1.18
LSM8-202ENST00000411938 ANTXR2P58335 489 aa7.71□□□□□ -1.18
LSM8-202ENST00000411938 AP3B2Q13367 1082 aa7.71□□□□□ -1.18
LSM8-202ENST00000411938 PKP1Q13835 747 aa7.71□□□□□ -1.18
LSM8-202ENST00000411938 TARBP2Q15633 366 aaKnown RBP7.71□□□□□ -1.18
LSM8-202ENST00000411938 PSMD5Q16401 504 aa7.71□□□□□ -1.18
LSM8-202ENST00000411938 SLC5A9Q2M3M2 681 aa7.71□□□□□ -1.18
LSM8-202ENST00000411938 PRR16Q569H4 304 aa7.71□□□□□ -1.18
LSM8-202ENST00000411938 FAM78AQ5JUQ0 283 aa7.71□□□□□ -1.18
LSM8-202ENST00000411938 JAKMIP3Q5VZ66 844 aa7.71□□□□□ -1.18
LSM8-202ENST00000411938 WWC2Q6AWC2 1192 aa7.71□□□□□ -1.18
LSM8-202ENST00000411938 CAVIN1Q6NZI2 390 aaKnown RBP7.71□□□□□ -1.18
LSM8-202ENST00000411938 RAB11FIP4Q86YS3 637 aa7.71□□□□□ -1.18
LSM8-202ENST00000411938 MAP4K3Q8IVH8 894 aa7.71□□□□□ -1.18
LSM8-202ENST00000411938 SMG8Q8ND04 991 aaKnown RBP7.71□□□□□ -1.18
LSM8-202ENST00000411938 ANP32BQ92688 251 aaKnown RBP7.71□□□□□ -1.18
LSM8-202ENST00000411938 SH2D3AQ9BRG2 576 aa7.71□□□□□ -1.18
LSM8-202ENST00000411938 TTPALQ9BTX7 342 aa7.71□□□□□ -1.18
LSM8-202ENST00000411938 ZNF334Q9HCZ1 680 aaPredicted RBP7.71□□□□□ -1.18
LSM8-202ENST00000411938 TRPV5Q9NQA5 729 aa7.71□□□□□ -1.18
LSM8-202ENST00000411938 C2orf42Q9NWW7 574 aa7.71□□□□□ -1.18
LSM8-202ENST00000411938 MIOSQ9NXC5 875 aa7.71□□□□□ -1.18
LSM8-202ENST00000411938 ZDHHC9Q9Y397 364 aa7.71□□□□□ -1.18
LSM8-202ENST00000411938 NEUROG3Q9Y4Z2 214 aa7.71□□□□□ -1.18
LSM8-202ENST00000411938 HES2Q9Y543 173 aa7.71□□□□□ -1.18
LSM8-202ENST00000411938 IPPQ9Y573 584 aa7.71□□□□□ -1.18
LSM8-202ENST00000411938 SF3B1O75533 1304 aaKnown RBP eCLIP7.71□□□□□ -1.187e-9■■■■■ 35.7
LSM8-202ENST00000411938 NOTCH4Q99466 2003 aa7.71□□□□□ -1.18
LSM8-202ENST00000411938 PCNX2A6NKB5 2137 aa7.7□□□□□ -1.18
LSM8-202ENST00000411938 ASCC3Q8N3C0 2202 aaKnown RBP7.7□□□□□ -1.18
LSM8-202ENST00000411938 CCDC69A6NI79 296 aa7.7□□□□□ -1.18
LSM8-202ENST00000411938 E7EWF7 191 aa7.7□□□□□ -1.18
LSM8-202ENST00000411938 ZNF263O14978 683 aa7.7□□□□□ -1.18
LSM8-202ENST00000411938 ADAM12O43184 909 aa7.7□□□□□ -1.18
LSM8-202ENST00000411938 POU2F2P09086 479 aa7.7□□□□□ -1.18
LSM8-202ENST00000411938 SRGAP2CP0DJJ0 459 aa7.7□□□□□ -1.18
LSM8-202ENST00000411938 CALM1P0DP23 149 aa7.7□□□□□ -1.18
LSM8-202ENST00000411938 CALM2P0DP24 149 aa7.7□□□□□ -1.18
LSM8-202ENST00000411938 CALM3P0DP25 149 aa7.7□□□□□ -1.18
LSM8-202ENST00000411938 PSMC3P17980 439 aa7.7□□□□□ -1.18
LSM8-202ENST00000411938 CSRP1P21291 193 aaKnown RBP7.7□□□□□ -1.18
LSM8-202ENST00000411938 FCARP24071 287 aa7.7□□□□□ -1.18
LSM8-202ENST00000411938 HOXA11P31270 313 aaPredicted RBP7.7□□□□□ -1.18
LSM8-202ENST00000411938 HSPA4P34932 840 aa7.7□□□□□ -1.18
LSM8-202ENST00000411938 OR1D2P34982 312 aa7.7□□□□□ -1.18
LSM8-202ENST00000411938 KPNA1P52294 538 aaPredicted RBP7.7□□□□□ -1.18
LSM8-202ENST00000411938 SETQ01105 290 aaPredicted RBP7.7□□□□□ -1.18
LSM8-202ENST00000411938 UVSSAQ2YD98 709 aa7.7□□□□□ -1.18
LSM8-202ENST00000411938 ZSCAN23Q3MJ62 389 aa7.7□□□□□ -1.18
LSM8-202ENST00000411938 XKR3Q5GH77 459 aa7.7□□□□□ -1.18
LSM8-202ENST00000411938 FAM171A1Q5VUB5 890 aa7.7□□□□□ -1.18
LSM8-202ENST00000411938 TYW1BQ6NUM6 668 aa7.7□□□□□ -1.18
LSM8-202ENST00000411938 POTEHQ6S545 545 aa7.7□□□□□ -1.18
LSM8-202ENST00000411938 TEX2Q8IWB9 1127 aa7.7□□□□□ -1.18
LSM8-202ENST00000411938 LNX1Q8TBB1 728 aaPredicted RBP7.7□□□□□ -1.18
LSM8-202ENST00000411938 FAM200AQ8TCP9 573 aa7.7□□□□□ -1.18
LSM8-202ENST00000411938 CSGALNACT1Q8TDX6 532 aa7.7□□□□□ -1.18
LSM8-202ENST00000411938 HASPINQ8TF76 798 aa7.7□□□□□ -1.18
LSM8-202ENST00000411938 PIK3R5Q8WYR1 880 aa7.7□□□□□ -1.18
LSM8-202ENST00000411938 EIF2AQ9BY44 585 aaKnown RBP7.7□□□□□ -1.18
LSM8-202ENST00000411938 NIFKQ9BYG3 293 aaKnown RBP7.7□□□□□ -1.18
LSM8-202ENST00000411938 IFT122Q9HBG6 1241 aa7.7□□□□□ -1.18
LSM8-202ENST00000411938 CACNG4Q9UBN1 327 aa7.7□□□□□ -1.18
LSM8-202ENST00000411938 MSRB2Q9Y3D2 182 aa7.7□□□□□ -1.18
LSM8-202ENST00000411938 TAF6LQ9Y6J9 622 aa7.7□□□□□ -1.18
LSM8-202ENST00000411938 ADAMTS20P59510 1910 aa7.7□□□□□ -1.18
LSM8-202ENST00000411938 GON4LQ3T8J9 2241 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms