RNA–Protein interactions for RNA: ENST00000411553.3

HCG11-201, Transcript of HLA complex group 11, humanhuman

BASIC

Gene HCG11, Length 5,696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG11-201ENST00000411553 AP3B1O00203 1094 aa19.38■□□□□ 0.69
HCG11-201ENST00000411553 KCNQ2O43526 872 aa19.38■□□□□ 0.69
HCG11-201ENST00000411553 OCA2Q04671 838 aa19.38■□□□□ 0.69
HCG11-201ENST00000411553 ZFATQ9P243 1243 aa19.38■□□□□ 0.69
HCG11-201ENST00000411553 SNX9Q9Y5X1 595 aa19.38■□□□□ 0.69
HCG11-201ENST00000411553 ESYT3A0FGR9 886 aa19.38■□□□□ 0.69
HCG11-201ENST00000411553 TEX33O43247 280 aa19.38■□□□□ 0.69
HCG11-201ENST00000411553 FLOT2Q14254 428 aa19.38■□□□□ 0.69
HCG11-201ENST00000411553 MAPRE2Q15555 327 aa19.38■□□□□ 0.69
HCG11-201ENST00000411553 SRBD1Q8N5C6 995 aaKnown RBP19.38■□□□□ 0.69
HCG11-201ENST00000411553 OTUB1Q96FW1 271 aaPredicted RBP19.38■□□□□ 0.69
HCG11-201ENST00000411553 TSSK1BQ9BXA7 367 aa19.38■□□□□ 0.69
HCG11-201ENST00000411553 TSPOAP1O95153 1857 aa19.38■□□□□ 0.69
HCG11-201ENST00000411553 DYNC1LI2O43237 492 aaPredicted RBP19.38■□□□□ 0.69
HCG11-201ENST00000411553 NCAPHQ15003 741 aa19.38■□□□□ 0.69
HCG11-201ENST00000411553 MFN1Q8IWA4 741 aa19.38■□□□□ 0.69
HCG11-201ENST00000411553 NSUN4Q96CB9 384 aaKnown RBP19.38■□□□□ 0.69
HCG11-201ENST00000411553 DACH2Q96NX9 599 aa19.38■□□□□ 0.69
HCG11-201ENST00000411553 NPHP3-ACAD11A0A0J9YXS1 232 aa19.38■□□□□ 0.69
HCG11-201ENST00000411553 ATICP31939 592 aa19.38■□□□□ 0.69
HCG11-201ENST00000411553 KRT17Q04695 432 aa19.38■□□□□ 0.69
HCG11-201ENST00000411553 BAATQ14032 418 aaPredicted RBP19.38■□□□□ 0.69
HCG11-201ENST00000411553 MTHFD1LQ6UB35 978 aa19.38■□□□□ 0.69
HCG11-201ENST00000411553 PATL1Q86TB9 770 aaKnown RBP19.38■□□□□ 0.69
HCG11-201ENST00000411553 TAGAPQ8N103 731 aa19.38■□□□□ 0.69
HCG11-201ENST00000411553 CRAMP1Q96RY5 1269 aa19.38■□□□□ 0.69
HCG11-201ENST00000411553 GH1P01241 217 aa19.37■□□□□ 0.69
HCG11-201ENST00000411553 RARBP10826 455 aa19.37■□□□□ 0.69
HCG11-201ENST00000411553 KDELC2Q7Z4H8 507 aa19.37■□□□□ 0.69
HCG11-201ENST00000411553 TMEM143Q96AN5 459 aa19.37■□□□□ 0.69
HCG11-201ENST00000411553 DAGLAQ9Y4D2 1042 aa19.37■□□□□ 0.69
HCG11-201ENST00000411553 GTPBP10A4D1E9 387 aaKnown RBP19.37■□□□□ 0.69
HCG11-201ENST00000411553 C3orf70A6NLC5 250 aaPredicted RBP19.37■□□□□ 0.69
HCG11-201ENST00000411553 TMEM132DQ14C87 1099 aa19.37■□□□□ 0.69
HCG11-201ENST00000411553 MTMR4Q9NYA4 1195 aa19.37■□□□□ 0.69
HCG11-201ENST00000411553 ADGRG1Q9Y653 693 aa19.37■□□□□ 0.69
HCG11-201ENST00000411553 CTSHP09668 335 aa19.37■□□□□ 0.69
HCG11-201ENST00000411553 SNAPC2Q13487 334 aa19.37■□□□□ 0.69
HCG11-201ENST00000411553 HIF1AQ16665 826 aa19.37■□□□□ 0.69
HCG11-201ENST00000411553 SYTL3Q4VX76 610 aa19.37■□□□□ 0.69
HCG11-201ENST00000411553 ATXN7L3BQ96GX2 97 aa19.37■□□□□ 0.69
HCG11-201ENST00000411553 PARK7Q99497 189 aaKnown RBP19.37■□□□□ 0.69
HCG11-201ENST00000411553 KCNN4O15554 427 aa19.37■□□□□ 0.69
HCG11-201ENST00000411553 PSMD3O43242 534 aa19.37■□□□□ 0.69
HCG11-201ENST00000411553 TMED1Q13445 227 aa19.37■□□□□ 0.69
HCG11-201ENST00000411553 WDR35Q9P2L0 1181 aa19.37■□□□□ 0.69
HCG11-201ENST00000411553 GMNCA6NCL1 334 aa19.36■□□□□ 0.69
HCG11-201ENST00000411553 C6orf222P0C671 652 aaPredicted RBP19.36■□□□□ 0.69
HCG11-201ENST00000411553 MAP4P27816 1152 aaKnown RBP19.36■□□□□ 0.69
HCG11-201ENST00000411553 IER5Q5VY09 327 aa19.36■□□□□ 0.69
HCG11-201ENST00000411553 SHC4Q6S5L8 630 aa19.36■□□□□ 0.69
HCG11-201ENST00000411553 RCOR2Q8IZ40 523 aa19.36■□□□□ 0.69
HCG11-201ENST00000411553 ZNF280CQ8ND82 737 aa19.36■□□□□ 0.69
HCG11-201ENST00000411553 SEPT1Q8WYJ6 367 aa19.36■□□□□ 0.69
HCG11-201ENST00000411553 MED15Q96RN5 788 aa19.36■□□□□ 0.69
HCG11-201ENST00000411553 CCDC90BQ9GZT6 254 aa19.36■□□□□ 0.69
HCG11-201ENST00000411553 ZSCAN9O15535 394 aaPredicted RBP19.36■□□□□ 0.69
HCG11-201ENST00000411553 SYF2O95926 243 aaKnown RBP19.36■□□□□ 0.69
HCG11-201ENST00000411553 SNX17Q15036 470 aa19.36■□□□□ 0.69
HCG11-201ENST00000411553 SCFD1Q8WVM8 642 aa19.36■□□□□ 0.69
HCG11-201ENST00000411553 ALDH8A1Q9H2A2 487 aaPredicted RBP19.36■□□□□ 0.69
HCG11-201ENST00000411553 KIF28PB7ZC32 967 aa19.36■□□□□ 0.69
HCG11-201ENST00000411553 HIST1H2AGP0C0S8 130 aaPredicted RBP19.36■□□□□ 0.69
HCG11-201ENST00000411553 GFAPP14136 432 aa19.36■□□□□ 0.69
HCG11-201ENST00000411553 HIST1H2ADP20671 130 aa19.36■□□□□ 0.69
HCG11-201ENST00000411553 ZNF543Q08ER8 600 aa19.36■□□□□ 0.69
HCG11-201ENST00000411553 HIST1H2AHQ96KK5 128 aa19.36■□□□□ 0.69
HCG11-201ENST00000411553 HIST1H2AJQ99878 128 aa19.36■□□□□ 0.69
HCG11-201ENST00000411553 H2AFJQ9BTM1 129 aa19.36■□□□□ 0.69
HCG11-201ENST00000411553 CRB1P82279 1406 aa19.36■□□□□ 0.69
HCG11-201ENST00000411553 RUBCNLQ9H714 662 aa19.36■□□□□ 0.69
HCG11-201ENST00000411553 STOML1Q9UBI4 398 aa19.36■□□□□ 0.69
HCG11-201ENST00000411553 CCDC22O60826 627 aa19.36■□□□□ 0.69
HCG11-201ENST00000411553 AP2B1P63010 937 aa19.36■□□□□ 0.69
HCG11-201ENST00000411553 ATL2Q8NHH9 583 aa19.36■□□□□ 0.69
HCG11-201ENST00000411553 SENP1Q9P0U3 644 aa19.36■□□□□ 0.69
HCG11-201ENST00000411553 HDAC6Q9UBN7 1215 aa19.36■□□□□ 0.69
HCG11-201ENST00000411553 CDV3Q9UKY7 258 aaKnown RBP19.36■□□□□ 0.69
HCG11-201ENST00000411553 ACOT2P49753 483 aa19.35■□□□□ 0.69
HCG11-201ENST00000411553 SESN2P58004 480 aaPredicted RBP19.35■□□□□ 0.69
HCG11-201ENST00000411553 WASHC5Q12768 1159 aa19.35■□□□□ 0.69
HCG11-201ENST00000411553 SPON1Q9HCB6 807 aa19.35■□□□□ 0.69
HCG11-201ENST00000411553 RNPC3Q96LT9 517 aaKnown RBP19.35■□□□□ 0.69
HCG11-201ENST00000411553 FAM161BQ96MY7 647 aa19.35■□□□□ 0.69
HCG11-201ENST00000411553 CLCA2Q9UQC9 943 aa19.35■□□□□ 0.69
HCG11-201ENST00000411553 MAGEB2O15479 319 aa19.35■□□□□ 0.69
HCG11-201ENST00000411553 CYP2C19P33261 490 aa19.35■□□□□ 0.69
HCG11-201ENST00000411553 GNL1P36915 607 aaPredicted RBP19.35■□□□□ 0.69
HCG11-201ENST00000411553 FLT1P17948 1338 aa19.35■□□□□ 0.69
HCG11-201ENST00000411553 CHUKO15111 745 aa19.35■□□□□ 0.69
HCG11-201ENST00000411553 DMTNQ08495 405 aa19.35■□□□□ 0.69
HCG11-201ENST00000411553 ZFYVE28Q9HCC9 887 aa19.35■□□□□ 0.69
HCG11-201ENST00000411553 PDGFRAP16234 1089 aa19.34■□□□□ 0.69
HCG11-201ENST00000411553 ZNF157P51786 506 aaPredicted RBP19.34■□□□□ 0.69
HCG11-201ENST00000411553 GYS2P54840 703 aa19.34■□□□□ 0.69
HCG11-201ENST00000411553 SGSM1Q2NKQ1 1148 aa19.34■□□□□ 0.69
HCG11-201ENST00000411553 ATPAF2Q8N5M1 289 aa19.34■□□□□ 0.69
HCG11-201ENST00000411553 POLRMTO00411 1230 aaKnown RBP19.34■□□□□ 0.69
HCG11-201ENST00000411553 HMOX2P30519 316 aa19.34■□□□□ 0.69
HCG11-201ENST00000411553 RGS7P49802 495 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms