RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 ASB16Q96NS5 453 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 CEP89Q96ST8 783 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 CLSTN3Q9BQT9 956 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 SH2D3AQ9BRG2 576 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 SCNM1Q9BWG6 230 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 TMEM121BQ9BXQ6 578 aaPredicted RBP2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 EIF2AQ9BY44 585 aaKnown RBP2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 ADAM33Q9BZ11 813 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 PLA2G2FQ9BZM2 168 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 TRIM6Q9C030 488 aaPredicted RBP2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 ZMYND12Q9H0C1 365 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 CSRNP2Q9H175 543 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 ARRDC1-AS1Q9H2J1 176 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 RNF39Q9H2S5 420 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 RWDD1Q9H446 243 aaPredicted RBP2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 C8orf33Q9H7E9 229 aaPredicted RBP2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 ZNF334Q9HCZ1 680 aaPredicted RBP2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 C6orf50Q9HD87 102 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 AVENQ9NQS1 362 aaPredicted RBP2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 VPS45Q9NRW7 570 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 RXFP3Q9NSD7 469 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 MIOSQ9NXC5 875 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 PARP2Q9UGN5 583 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 GIT1Q9Y2X7 761 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 HES2Q9Y543 173 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 PPME1Q9Y570 386 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 IPPQ9Y573 584 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 TAF6LQ9Y6J9 622 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 EVPLQ92817 2033 aa2.64□□□□□ -1.99
RNU4-53P-201ENST00000410828 DMDP11532 3685 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 NOTCH2Q04721 2471 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 KNL1Q8NG31 2342 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 GOLGA4Q13439 2230 aaKnown RBP2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 FRYQ5TBA9 3013 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 CCDC196A0A1B0GTZ2 297 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 ARHGEF37A1IGU5 675 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 TMEM150BA6NC51 233 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 CASTOR2A6NHX0 329 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 EIF4E1BA6NMX2 242 aaKnown RBP2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 C4orf47A7E2U8 309 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 PRRG1O14668 218 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 GIPC1O14908 333 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 CHADO15335 359 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 SGSM2O43147 1006 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 ADAM12O43184 909 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 ZBTB43O43298 467 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 TRAPPC3O43617 180 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 TSPAN1O60635 241 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 ATG13O75143 517 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 PSMD10O75832 226 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 AKAP3O75969 853 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 B3GAT3O94766 335 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 STBD1O95210 358 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 KIF4AO95239 1232 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 THP07101 528 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 CCDC192P0DO97 292 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 CEACAM1P13688 526 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 CEBPBP17676 345 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 SPINK2P20155 84 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 CSRP1P21291 193 aaKnown RBP2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 FGFR3P22607 806 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 FCARP24071 287 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 AKAP5P24588 427 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 CHMLP26374 656 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 RDXP35241 583 aaKnown RBP2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 VIPR2P41587 438 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 RAP1GAPP47736 663 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 QARSP47897 775 aaKnown RBP2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 USP11P51784 963 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 KPNA1P52294 538 aaPredicted RBP2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 NPEPPSP55786 919 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 NUCB1Q02818 461 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 POU5F1BQ06416 359 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 LAMTOR4Q0VGL1 99 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 FUT2Q10981 343 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 AAMPQ13685 434 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 TFDP1Q14186 410 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 MXD4Q14582 209 aaPredicted RBP2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 PTPAQ15257 358 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 ELF2Q15723 593 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 CCDC6Q16204 474 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 PFKFB3Q16875 520 aaPredicted RBP2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 SLC5A9Q2M3M2 681 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 Q4G0T1 1027 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 PLA2G2CQ5R387 149 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 SH3PXD2AQ5TCZ1 1133 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 PLA2G4FQ68DD2 849 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 SLC27A1Q6PCB7 646 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 APOA5Q6Q788 366 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 PDZRN4Q6ZMN7 1036 aaPredicted RBP2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 Q6ZS52 159 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 ANKS3Q6ZW76 656 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 ANO5Q75V66 913 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 PDZD4Q76G19 769 aaPredicted RBP2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 OTUD6AQ7L8S5 288 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 HAUS6Q7Z4H7 955 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 FERMT3Q86UX7 667 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 KBTBD6Q86V97 674 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 RALGPS2Q86X27 583 aaPredicted RBP2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 MFSD6LQ8IWD5 586 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms