RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 OSTNP61366 133 aa16.54■□□□□ 0.24
LSM5-207ENST00000410044 CLDN10P78369 228 aa16.54■□□□□ 0.24
LSM5-207ENST00000410044 DEFB103AP81534 67 aa16.54■□□□□ 0.24
LSM5-207ENST00000410044 CYP24A1Q07973 514 aa16.54■□□□□ 0.24
LSM5-207ENST00000410044 PSMD6Q15008 389 aa16.54■□□□□ 0.24
LSM5-207ENST00000410044 SHHQ15465 462 aa16.54■□□□□ 0.24
LSM5-207ENST00000410044 TPD52L1Q16890 204 aaPredicted RBP16.54■□□□□ 0.24
LSM5-207ENST00000410044 CDKAL1Q5VV42 579 aa16.54■□□□□ 0.24
LSM5-207ENST00000410044 INTS8Q75QN2 995 aaKnown RBP16.54■□□□□ 0.24
LSM5-207ENST00000410044 NT5DC4Q86YG4 428 aa16.54■□□□□ 0.24
LSM5-207ENST00000410044 FAM186BQ8IYM0 893 aa16.54■□□□□ 0.24
LSM5-207ENST00000410044 RDH13Q8NBN7 331 aa16.54■□□□□ 0.24
LSM5-207ENST00000410044 GSTCDQ8NEC7 633 aa16.54■□□□□ 0.24
LSM5-207ENST00000410044 PARD3BQ8TEW8 1205 aa16.54■□□□□ 0.24
LSM5-207ENST00000410044 LPPQ93052 612 aa16.54■□□□□ 0.24
LSM5-207ENST00000410044 ZNF689Q96CS4 500 aaPredicted RBP16.54■□□□□ 0.24
LSM5-207ENST00000410044 SNX27Q96L92 541 aa16.54■□□□□ 0.24
LSM5-207ENST00000410044 SLC9A7Q96T83 725 aa16.54■□□□□ 0.24
LSM5-207ENST00000410044 HSD3B7Q9H2F3 369 aa16.54■□□□□ 0.24
LSM5-207ENST00000410044 RSAD1Q9HA92 442 aa16.54■□□□□ 0.24
LSM5-207ENST00000410044 CXXC1Q9P0U4 656 aaPredicted RBP16.54■□□□□ 0.24
LSM5-207ENST00000410044 CNTN3Q9P232 1028 aa16.54■□□□□ 0.24
LSM5-207ENST00000410044 LRFN2Q9ULH4 789 aa16.54■□□□□ 0.24
LSM5-207ENST00000410044 DERAQ9Y315 318 aa16.54■□□□□ 0.24
LSM5-207ENST00000410044 SLC4A7Q9Y6M7 1214 aa16.54■□□□□ 0.24
LSM5-207ENST00000410044 PDCD11Q14690 1871 aaKnown RBP16.54■□□□□ 0.24
LSM5-207ENST00000410044 FNDC1Q4ZHG4 1894 aaPredicted RBP16.54■□□□□ 0.24
LSM5-207ENST00000410044 LACTBL1A8MY62 500 aa16.53■□□□□ 0.24
LSM5-207ENST00000410044 CXCL8P10145 99 aa16.53■□□□□ 0.24
LSM5-207ENST00000410044 KCNA4P22459 653 aa16.53■□□□□ 0.24
LSM5-207ENST00000410044 ZBTB6Q15916 424 aa16.53■□□□□ 0.24
LSM5-207ENST00000410044 CLLU1OSQ5K130 101 aa16.53■□□□□ 0.24
LSM5-207ENST00000410044 C9orf50Q5SZB4 431 aa16.53■□□□□ 0.24
LSM5-207ENST00000410044 FAM114A1Q8IWE2 563 aa16.53■□□□□ 0.24
LSM5-207ENST00000410044 AOPEPQ8N6M6 819 aa16.53■□□□□ 0.24
LSM5-207ENST00000410044 EEF2KMTQ96G04 330 aa16.53■□□□□ 0.24
LSM5-207ENST00000410044 APOL6Q9BWW8 343 aa16.53■□□□□ 0.24
LSM5-207ENST00000410044 UBE2OQ9C0C9 1292 aaKnown RBP16.53■□□□□ 0.24
LSM5-207ENST00000410044 TMEM117Q9H0C3 514 aa16.53■□□□□ 0.24
LSM5-207ENST00000410044 PRO3102Q9H379 93 aa16.53■□□□□ 0.24
LSM5-207ENST00000410044 SAMSN1Q9NSI8 373 aaKnown RBP16.53■□□□□ 0.24
LSM5-207ENST00000410044 FANCLQ9NW38 375 aa16.53■□□□□ 0.24
LSM5-207ENST00000410044 RBAKQ9NYW8 714 aaPredicted RBP16.53■□□□□ 0.24
LSM5-207ENST00000410044 KANSL3Q9P2N6 904 aa16.53■□□□□ 0.24
LSM5-207ENST00000410044 ARL5CA6NH57 179 aa16.52■□□□□ 0.24
LSM5-207ENST00000410044 LRRC10BA6NIK2 292 aa16.52■□□□□ 0.24
LSM5-207ENST00000410044 ZNF18P17022 549 aa16.52■□□□□ 0.24
LSM5-207ENST00000410044 HTRA4P83105 476 aaPredicted RBP16.52■□□□□ 0.24
LSM5-207ENST00000410044 PPP2R3AQ06190 1150 aa16.52■□□□□ 0.24
LSM5-207ENST00000410044 PLEKHO2Q8TD55 490 aa16.52■□□□□ 0.24
LSM5-207ENST00000410044 CASD1Q96PB1 797 aa16.52■□□□□ 0.24
LSM5-207ENST00000410044 GAD1Q99259 594 aa16.52■□□□□ 0.24
LSM5-207ENST00000410044 RC3H2Q9HBD1 1191 aaKnown RBP16.52■□□□□ 0.24
LSM5-207ENST00000410044 MIOSQ9NXC5 875 aa16.52■□□□□ 0.24
LSM5-207ENST00000410044 ARMCX3Q9UH62 379 aaPredicted RBP16.52■□□□□ 0.24
LSM5-207ENST00000410044 C2CD2Q9Y426 696 aa16.52■□□□□ 0.24
LSM5-207ENST00000410044 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.52■□□□□ 0.24
LSM5-207ENST00000410044 TDRD15B5MCY1 1934 aaKnown RBP16.51■□□□□ 0.23
LSM5-207ENST00000410044 SMIM28A0A1B0GU29 152 aa16.51■□□□□ 0.23
LSM5-207ENST00000410044 ZBBXA8MT70 800 aa16.51■□□□□ 0.23
LSM5-207ENST00000410044 BECN2A8MW95 431 aa16.51■□□□□ 0.23
LSM5-207ENST00000410044 PTGESO14684 152 aa16.51■□□□□ 0.23
LSM5-207ENST00000410044 GJB5O95377 273 aa16.51■□□□□ 0.23
LSM5-207ENST00000410044 FGFR1P11362 822 aa16.51■□□□□ 0.23
LSM5-207ENST00000410044 KRT13P13646 458 aa16.51■□□□□ 0.23
LSM5-207ENST00000410044 EEF1GP26641 437 aaKnown RBP16.51■□□□□ 0.23
LSM5-207ENST00000410044 VAMP7P51809 220 aa16.51■□□□□ 0.23
LSM5-207ENST00000410044 WNT7BP56706 349 aa16.51■□□□□ 0.23
LSM5-207ENST00000410044 BFSP1Q12934 665 aa16.51■□□□□ 0.23
LSM5-207ENST00000410044 C1orf220Q5T0J3 134 aa16.51■□□□□ 0.23
LSM5-207ENST00000410044 GLB1LQ6UWU2 654 aa16.51■□□□□ 0.23
LSM5-207ENST00000410044 USP37Q86T82 979 aa16.51■□□□□ 0.23
LSM5-207ENST00000410044 GAS2L3Q86XJ1 694 aa16.51■□□□□ 0.23
LSM5-207ENST00000410044 TRIM59Q8IWR1 403 aa16.51■□□□□ 0.23
LSM5-207ENST00000410044 RNF169Q8NCN4 708 aa16.51■□□□□ 0.23
LSM5-207ENST00000410044 ZMAT2Q96NC0 199 aaKnown RBP16.51■□□□□ 0.23
LSM5-207ENST00000410044 PPP1R10Q96QC0 940 aaKnown RBP16.51■□□□□ 0.23
LSM5-207ENST00000410044 CXCL16Q9H2A7 254 aa16.51■□□□□ 0.23
LSM5-207ENST00000410044 PDE11AQ9HCR9 933 aa16.51■□□□□ 0.23
LSM5-207ENST00000410044 KLK14Q9P0G3 267 aa16.51■□□□□ 0.23
LSM5-207ENST00000410044 TNRC18O15417 2968 aaPredicted RBP16.5■□□□□ 0.23
LSM5-207ENST00000410044 UPP2O95045 317 aa16.5■□□□□ 0.23
LSM5-207ENST00000410044 CYP3A5P20815 502 aa16.5■□□□□ 0.23
LSM5-207ENST00000410044 MLH1P40692 756 aa16.5■□□□□ 0.23
LSM5-207ENST00000410044 AFF1P51825 1210 aaKnown RBP16.5■□□□□ 0.23
LSM5-207ENST00000410044 AP3M2P53677 418 aa16.5■□□□□ 0.23
LSM5-207ENST00000410044 SPAG1Q07617 926 aa16.5■□□□□ 0.23
LSM5-207ENST00000410044 NAB2Q15742 525 aa16.5■□□□□ 0.23
LSM5-207ENST00000410044 CCDC40Q4G0X9 1142 aa16.5■□□□□ 0.23
LSM5-207ENST00000410044 TCP11X2Q5H9J9 407 aa16.5■□□□□ 0.23
LSM5-207ENST00000410044 NOMO2Q5JPE7 1267 aa16.5■□□□□ 0.23
LSM5-207ENST00000410044 LUZP1Q86V48 1076 aa16.5■□□□□ 0.23
LSM5-207ENST00000410044 WDR49Q8IV35 697 aa16.5■□□□□ 0.23
LSM5-207ENST00000410044 HERC6Q8IVU3 1022 aa16.5■□□□□ 0.23
LSM5-207ENST00000410044 HELQQ8TDG4 1101 aa16.5■□□□□ 0.23
LSM5-207ENST00000410044 CNOT6LQ96LI5 555 aaKnown RBP16.5■□□□□ 0.23
LSM5-207ENST00000410044 ZFP42Q96MM3 310 aa16.5■□□□□ 0.23
LSM5-207ENST00000410044 CGRRF1Q99675 332 aa16.5■□□□□ 0.23
LSM5-207ENST00000410044 PDE4DIPQ5VU43 2346 aa16.5■□□□□ 0.23
LSM5-207ENST00000410044 COL4A6Q14031 1691 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms