RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 ZNF131P52739 623 aa19.41■□□□□ 0.7
LSM5-204ENST00000409909 NCKAP1LP55160 1127 aa19.41■□□□□ 0.7
LSM5-204ENST00000409909 STRN3Q13033 797 aa19.41■□□□□ 0.7
LSM5-204ENST00000409909 SLC39A14Q15043 492 aa19.41■□□□□ 0.7
LSM5-204ENST00000409909 USP41Q3LFD5 358 aa19.41■□□□□ 0.7
LSM5-204ENST00000409909 XKR4Q5GH76 650 aa19.41■□□□□ 0.7
LSM5-204ENST00000409909 KIAA1841Q6NSI8 718 aa19.41■□□□□ 0.7
LSM5-204ENST00000409909 CES5AQ6NT32 575 aa19.41■□□□□ 0.7
LSM5-204ENST00000409909 MPZL3Q6UWV2 235 aa19.41■□□□□ 0.7
LSM5-204ENST00000409909 TCHPQ9BT92 498 aa19.41■□□□□ 0.7
LSM5-204ENST00000409909 ZSCAN16Q9H4T2 348 aaPredicted RBP19.41■□□□□ 0.7
LSM5-204ENST00000409909 LARSQ9P2J5 1176 aaKnown RBP19.41■□□□□ 0.7
LSM5-204ENST00000409909 TOM1L1O75674 476 aa19.4■□□□□ 0.7
LSM5-204ENST00000409909 TMEM31Q5JXX7 168 aa19.4■□□□□ 0.7
LSM5-204ENST00000409909 RTP2Q5QGT7 225 aa19.4■□□□□ 0.7
LSM5-204ENST00000409909 TMC5Q6UXY8 1006 aa19.4■□□□□ 0.7
LSM5-204ENST00000409909 HAUS6Q7Z4H7 955 aa19.4■□□□□ 0.7
LSM5-204ENST00000409909 MYCT1Q8N699 235 aa19.4■□□□□ 0.7
LSM5-204ENST00000409909 RIN2Q8WYP3 895 aaPredicted RBP19.4■□□□□ 0.7
LSM5-204ENST00000409909 LARP4BQ92615 738 aaKnown RBP19.4■□□□□ 0.7
LSM5-204ENST00000409909 CCDC94Q9BW85 323 aaPredicted RBP19.4■□□□□ 0.7
LSM5-204ENST00000409909 HAPLN2Q9GZV7 340 aa19.4■□□□□ 0.7
LSM5-204ENST00000409909 POMKQ9H5K3 350 aa19.4■□□□□ 0.7
LSM5-204ENST00000409909 MORC2Q9Y6X9 1032 aaPredicted RBP19.4■□□□□ 0.7
LSM5-204ENST00000409909 PLXNA3P51805 1871 aa19.39■□□□□ 0.7
LSM5-204ENST00000409909 ADH1AP07327 375 aa19.39■□□□□ 0.69
LSM5-204ENST00000409909 HARSP12081 509 aaKnown RBP19.39■□□□□ 0.69
LSM5-204ENST00000409909 COL9A1P20849 921 aa19.39■□□□□ 0.69
LSM5-204ENST00000409909 SOX4Q06945 474 aaPredicted RBP19.39■□□□□ 0.69
LSM5-204ENST00000409909 SEZ6Q53EL9 994 aa19.39■□□□□ 0.69
LSM5-204ENST00000409909 HERC4Q5GLZ8 1057 aaPredicted RBP19.39■□□□□ 0.69
LSM5-204ENST00000409909 CD300LGQ6UXG3 332 aa19.39■□□□□ 0.69
LSM5-204ENST00000409909 ZPBP2Q6X784 338 aa19.39■□□□□ 0.69
LSM5-204ENST00000409909 GPR65Q8IYL9 337 aa19.39■□□□□ 0.69
LSM5-204ENST00000409909 KCNN1Q92952 543 aa19.39■□□□□ 0.69
LSM5-204ENST00000409909 ZMAT2Q96NC0 199 aaKnown RBP19.39■□□□□ 0.69
LSM5-204ENST00000409909 ACAP3Q96P50 834 aa19.39■□□□□ 0.69
LSM5-204ENST00000409909 FIZ1Q96SL8 496 aa19.39■□□□□ 0.69
LSM5-204ENST00000409909 PARVGQ9HBI0 331 aa19.39■□□□□ 0.69
LSM5-204ENST00000409909 GOLGA2P5Q9HBQ8 144 aa19.39■□□□□ 0.69
LSM5-204ENST00000409909 ANKFY1Q9P2R3 1169 aa19.39■□□□□ 0.69
LSM5-204ENST00000409909 RAPGEFL1Q9UHV5 662 aa19.39■□□□□ 0.69
LSM5-204ENST00000409909 SF3B1O75533 1304 aaKnown RBP eCLIP19.39■□□□□ 0.693e-7■■■■■ 27.3
LSM5-204ENST00000409909 FAM13AO94988 1023 aa19.38■□□□□ 0.69
LSM5-204ENST00000409909 KRT18P05783 430 aaKnown RBP19.38■□□□□ 0.69
LSM5-204ENST00000409909 RPL17P18621 184 aaKnown RBP19.38■□□□□ 0.69
LSM5-204ENST00000409909 SP100P23497 879 aaPredicted RBP19.38■□□□□ 0.69
LSM5-204ENST00000409909 MTHFRP42898 656 aa19.38■□□□□ 0.69
LSM5-204ENST00000409909 NASPP49321 788 aaPredicted RBP19.38■□□□□ 0.69
LSM5-204ENST00000409909 CLCNKBP51801 687 aa19.38■□□□□ 0.69
LSM5-204ENST00000409909 YARSP54577 528 aaKnown RBP19.38■□□□□ 0.69
LSM5-204ENST00000409909 UPP1Q16831 310 aa19.38■□□□□ 0.69
LSM5-204ENST00000409909 FAM171A1Q5VUB5 890 aa19.38■□□□□ 0.69
LSM5-204ENST00000409909 PRSS55Q6UWB4 352 aaPredicted RBP19.38■□□□□ 0.69
LSM5-204ENST00000409909 HSCBQ8IWL3 235 aa19.38■□□□□ 0.69
LSM5-204ENST00000409909 SNX27Q96L92 541 aa19.38■□□□□ 0.69
LSM5-204ENST00000409909 NECTIN4Q96NY8 510 aa19.38■□□□□ 0.69
LSM5-204ENST00000409909 SFXN1Q9H9B4 322 aa19.38■□□□□ 0.69
LSM5-204ENST00000409909 TOPORSQ9NS56 1045 aaPredicted RBP19.38■□□□□ 0.69
LSM5-204ENST00000409909 FNIP2Q9P278 1114 aa19.38■□□□□ 0.69
LSM5-204ENST00000409909 CITO14578 2027 aa19.37■□□□□ 0.69
LSM5-204ENST00000409909 H0YCG3 227 aa19.37■□□□□ 0.69
LSM5-204ENST00000409909 SPATA31D3P0C874 917 aa19.37■□□□□ 0.69
LSM5-204ENST00000409909 MYBP10242 640 aa19.37■□□□□ 0.69
LSM5-204ENST00000409909 KCNE1P15382 129 aa19.37■□□□□ 0.69
LSM5-204ENST00000409909 MCL1Q07820 350 aa19.37■□□□□ 0.69
LSM5-204ENST00000409909 NOLC1Q14978 699 aaKnown RBP eCLIP19.37■□□□□ 0.69
LSM5-204ENST00000409909 SLC10A6Q3KNW5 377 aa19.37■□□□□ 0.69
LSM5-204ENST00000409909 ATAT1Q5SQI0 421 aa19.37■□□□□ 0.69
LSM5-204ENST00000409909 DCLRE1AQ6PJP8 1040 aa19.37■□□□□ 0.69
LSM5-204ENST00000409909 SPATA31D4Q6ZUB0 917 aa19.37■□□□□ 0.69
LSM5-204ENST00000409909 GPR149Q86SP6 731 aa19.37■□□□□ 0.69
LSM5-204ENST00000409909 PALB2Q86YC2 1186 aa19.37■□□□□ 0.69
LSM5-204ENST00000409909 GLYCTKQ8IVS8 523 aa19.37■□□□□ 0.69
LSM5-204ENST00000409909 KRI1Q8N9T8 703 aaKnown RBP19.37■□□□□ 0.69
LSM5-204ENST00000409909 C3orf58Q8NDZ4 430 aa19.37■□□□□ 0.69
LSM5-204ENST00000409909 RIPOR3Q96MK2 946 aa19.37■□□□□ 0.69
LSM5-204ENST00000409909 TTPALQ9BTX7 342 aa19.37■□□□□ 0.69
LSM5-204ENST00000409909 MAN1C1Q9NR34 630 aa19.37■□□□□ 0.69
LSM5-204ENST00000409909 TSHZ2Q9NRE2 1034 aa19.37■□□□□ 0.69
LSM5-204ENST00000409909 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.37■□□□□ 0.69
LSM5-204ENST00000409909 TFIP11Q9UBB9 837 aaKnown RBP19.37■□□□□ 0.69
LSM5-204ENST00000409909 CCDC39Q9UFE4 941 aa19.37■□□□□ 0.69
LSM5-204ENST00000409909 TBX20Q9UMR3 447 aa19.37■□□□□ 0.69
LSM5-204ENST00000409909 VWA8A3KMH1 1905 aa19.37■□□□□ 0.69
LSM5-204ENST00000409909 A0A087X0B3 334 aa19.36■□□□□ 0.69
LSM5-204ENST00000409909 TMEM189-UBE2V1I3L0A0 370 aa19.36■□□□□ 0.69
LSM5-204ENST00000409909 CLDN3O15551 220 aa19.36■□□□□ 0.69
LSM5-204ENST00000409909 TRAK2O60296 914 aa19.36■□□□□ 0.69
LSM5-204ENST00000409909 B3GAT3O94766 335 aa19.36■□□□□ 0.69
LSM5-204ENST00000409909 GLUD1P00367 558 aa19.36■□□□□ 0.69
LSM5-204ENST00000409909 NMT1P30419 496 aaKnown RBP19.36■□□□□ 0.69
LSM5-204ENST00000409909 FOXD4L5Q5VV16 416 aaPredicted RBP19.36■□□□□ 0.69
LSM5-204ENST00000409909 RRAGBQ5VZM2 374 aa19.36■□□□□ 0.69
LSM5-204ENST00000409909 LILRA6Q6PI73 481 aa19.36■□□□□ 0.69
LSM5-204ENST00000409909 CEP57Q86XR8 500 aa19.36■□□□□ 0.69
LSM5-204ENST00000409909 LINC00301Q8NCQ3 95 aa19.36■□□□□ 0.69
LSM5-204ENST00000409909 LNX1Q8TBB1 728 aaPredicted RBP19.36■□□□□ 0.69
LSM5-204ENST00000409909 FOXD4L4Q8WXT5 416 aaPredicted RBP19.36■□□□□ 0.69
LSM5-204ENST00000409909 C18orf25Q96B23 403 aaPredicted RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms