RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 CGNQ9P2M7 1197 aaKnown RBP12.2□□□□□ -0.46
SNX13-202ENST00000409604 H7C0C1 242 aa12.2□□□□□ -0.46
SNX13-202ENST00000409604 TOM1L1O75674 476 aa12.2□□□□□ -0.46
SNX13-202ENST00000409604 PALMO75781 387 aa12.2□□□□□ -0.46
SNX13-202ENST00000409604 ASGR1P07306 291 aa12.2□□□□□ -0.46
SNX13-202ENST00000409604 GJA5P36382 358 aa12.2□□□□□ -0.46
SNX13-202ENST00000409604 ATP5OP48047 213 aa12.2□□□□□ -0.46
SNX13-202ENST00000409604 FAM102AQ5T9C2 384 aaPredicted RBP12.2□□□□□ -0.46
SNX13-202ENST00000409604 ANKRD23Q86SG2 305 aa12.2□□□□□ -0.46
SNX13-202ENST00000409604 CCDC33Q8N5R6 958 aa12.2□□□□□ -0.46
SNX13-202ENST00000409604 URGCPQ8TCY9 931 aa12.2□□□□□ -0.46
SNX13-202ENST00000409604 PPM1EQ8WY54 764 aa12.2□□□□□ -0.46
SNX13-202ENST00000409604 FAM204AQ9H8W3 233 aa12.2□□□□□ -0.46
SNX13-202ENST00000409604 RASAL2Q9UJF2 1139 aa12.2□□□□□ -0.46
SNX13-202ENST00000409604 VAV3Q9UKW4 847 aa12.2□□□□□ -0.46
SNX13-202ENST00000409604 DUSP10Q9Y6W6 482 aa12.2□□□□□ -0.46
SNX13-202ENST00000409604 NWD2Q9ULI1 1742 aa12.2□□□□□ -0.46
SNX13-202ENST00000409604 A0A1B0GTH6 734 aa12.19□□□□□ -0.46
SNX13-202ENST00000409604 BUB1BO60566 1050 aaPredicted RBP12.19□□□□□ -0.46
SNX13-202ENST00000409604 RFX1P22670 979 aa12.19□□□□□ -0.46
SNX13-202ENST00000409604 NAMPTP43490 491 aa12.19□□□□□ -0.46
SNX13-202ENST00000409604 TRIM32Q13049 653 aa12.19□□□□□ -0.46
SNX13-202ENST00000409604 NR1I3Q14994 352 aa12.19□□□□□ -0.46
SNX13-202ENST00000409604 ZNF484Q5JVG2 852 aa12.19□□□□□ -0.46
SNX13-202ENST00000409604 CYP4A22Q5TCH4 519 aa12.19□□□□□ -0.46
SNX13-202ENST00000409604 DENND2CQ68D51 928 aa12.19□□□□□ -0.46
SNX13-202ENST00000409604 KRT12Q99456 494 aa12.19□□□□□ -0.46
SNX13-202ENST00000409604 SEPT5Q99719 369 aaPredicted RBP12.19□□□□□ -0.46
SNX13-202ENST00000409604 ADAM2Q99965 735 aa12.19□□□□□ -0.46
SNX13-202ENST00000409604 IKBKGQ9Y6K9 419 aa12.19□□□□□ -0.46
SNX13-202ENST00000409604 IRS2Q9Y4H2 1338 aa12.19□□□□□ -0.46
SNX13-202ENST00000409604 IGLV3-22A0A075B6J6 115 aa12.19□□□□□ -0.46
SNX13-202ENST00000409604 OPLAHO14841 1288 aa12.19□□□□□ -0.46
SNX13-202ENST00000409604 OGTO15294 1046 aa12.19□□□□□ -0.46
SNX13-202ENST00000409604 PSMA2P25787 234 aa12.19□□□□□ -0.46
SNX13-202ENST00000409604 GBP2P32456 591 aaPredicted RBP12.19□□□□□ -0.46
SNX13-202ENST00000409604 NCAPHQ15003 741 aa12.19□□□□□ -0.46
SNX13-202ENST00000409604 CFAP221Q4G0U5 840 aa12.19□□□□□ -0.46
SNX13-202ENST00000409604 TMEM119Q4V9L6 283 aa12.19□□□□□ -0.46
SNX13-202ENST00000409604 RAD9BQ6WBX8 426 aa12.19□□□□□ -0.46
SNX13-202ENST00000409604 RBBP8NLQ8NC74 664 aaPredicted RBP12.19□□□□□ -0.46
SNX13-202ENST00000409604 DNAJC19Q96DA6 116 aa12.19□□□□□ -0.46
SNX13-202ENST00000409604 ABI2Q9NYB9 513 aaPredicted RBP12.19□□□□□ -0.46
SNX13-202ENST00000409604 UBE4BO95155 1302 aa12.19□□□□□ -0.46
SNX13-202ENST00000409604 SPEF2Q9C093 1822 aa12.19□□□□□ -0.46
SNX13-202ENST00000409604 CA12O43570 354 aa12.19□□□□□ -0.46
SNX13-202ENST00000409604 CD52P31358 61 aa12.19□□□□□ -0.46
SNX13-202ENST00000409604 SURF1Q15526 300 aa12.19□□□□□ -0.46
SNX13-202ENST00000409604 KCNA10Q16322 511 aa12.19□□□□□ -0.46
SNX13-202ENST00000409604 MAP9Q49MG5 647 aa12.19□□□□□ -0.46
SNX13-202ENST00000409604 MMS22LQ6ZRQ5 1243 aa12.19□□□□□ -0.46
SNX13-202ENST00000409604 RFX6Q8HWS3 928 aa12.19□□□□□ -0.46
SNX13-202ENST00000409604 RNF139Q8WU17 664 aa12.19□□□□□ -0.46
SNX13-202ENST00000409604 DUSP9Q99956 384 aaKnown RBP12.19□□□□□ -0.46
SNX13-202ENST00000409604 APEX2Q9UBZ4 518 aa12.19□□□□□ -0.46
SNX13-202ENST00000409604 HEY1Q9Y5J3 304 aa12.19□□□□□ -0.46
SNX13-202ENST00000409604 HGSO14964 777 aaPredicted RBP12.18□□□□□ -0.46
SNX13-202ENST00000409604 C2orf54Q08AI8 447 aa12.18□□□□□ -0.46
SNX13-202ENST00000409604 CAPSQ13938 189 aa12.18□□□□□ -0.46
SNX13-202ENST00000409604 SARM1Q6SZW1 724 aa12.18□□□□□ -0.46
SNX13-202ENST00000409604 C4orf50Q6ZRC1 276 aa12.18□□□□□ -0.46
SNX13-202ENST00000409604 TMEM35BQ8NCS4 154 aa12.18□□□□□ -0.46
SNX13-202ENST00000409604 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.18□□□□□ -0.46
SNX13-202ENST00000409604 CCDC97Q96F63 343 aaPredicted RBP12.18□□□□□ -0.46
SNX13-202ENST00000409604 LIMA1Q9UHB6 759 aaKnown RBP12.18□□□□□ -0.46
SNX13-202ENST00000409604 CREB3O43889 395 aa12.18□□□□□ -0.46
SNX13-202ENST00000409604 KCNA2P16389 499 aa12.18□□□□□ -0.46
SNX13-202ENST00000409604 GTF2H1P32780 548 aa12.18□□□□□ -0.46
SNX13-202ENST00000409604 VAV2P52735 878 aa12.18□□□□□ -0.46
SNX13-202ENST00000409604 ADCY1Q08828 1119 aa12.18□□□□□ -0.46
SNX13-202ENST00000409604 CENPPQ6IPU0 288 aa12.18□□□□□ -0.46
SNX13-202ENST00000409604 MAGOHBQ96A72 148 aaKnown RBP12.18□□□□□ -0.46
SNX13-202ENST00000409604 BTBD6Q96KE9 485 aa12.18□□□□□ -0.46
SNX13-202ENST00000409604 GPR20Q99678 358 aa12.18□□□□□ -0.46
SNX13-202ENST00000409604 KCNF1Q9H3M0 494 aa12.18□□□□□ -0.46
SNX13-202ENST00000409604 ASAP2O43150 1006 aa12.18□□□□□ -0.46
SNX13-202ENST00000409604 EXTL3O43909 919 aa12.18□□□□□ -0.46
SNX13-202ENST00000409604 HOXA7P31268 230 aaPredicted RBP12.18□□□□□ -0.46
SNX13-202ENST00000409604 GRIK1P39086 918 aa12.18□□□□□ -0.46
SNX13-202ENST00000409604 RBP5P82980 135 aa12.18□□□□□ -0.46
SNX13-202ENST00000409604 HADHQ16836 314 aaKnown RBP12.18□□□□□ -0.46
SNX13-202ENST00000409604 MGAT5BQ3V5L5 792 aa12.18□□□□□ -0.46
SNX13-202ENST00000409604 CST9Q5W186 159 aa12.18□□□□□ -0.46
SNX13-202ENST00000409604 CCDC89Q8N998 374 aa12.18□□□□□ -0.46
SNX13-202ENST00000409604 ZSWIM2Q8NEG5 633 aa12.18□□□□□ -0.46
SNX13-202ENST00000409604 RDM1Q8NG50 284 aa12.18□□□□□ -0.46
SNX13-202ENST00000409604 BSNDQ8WZ55 320 aa12.18□□□□□ -0.46
SNX13-202ENST00000409604 GOLGA2P5Q9HBQ8 144 aa12.18□□□□□ -0.46
SNX13-202ENST00000409604 TRMT13Q9NUP7 481 aaKnown RBP12.18□□□□□ -0.46
SNX13-202ENST00000409604 CACNG4Q9UBN1 327 aa12.18□□□□□ -0.46
SNX13-202ENST00000409604 TCHHQ07283 1943 aa12.18□□□□□ -0.46
SNX13-202ENST00000409604 A6NJR5 290 aa12.18□□□□□ -0.46
SNX13-202ENST00000409604 KRT1P04264 644 aa12.18□□□□□ -0.46
SNX13-202ENST00000409604 SNX16P57768 344 aa12.18□□□□□ -0.46
SNX13-202ENST00000409604 CDY2AQ9Y6F7 541 aa12.18□□□□□ -0.46
SNX13-202ENST00000409604 SOX5P35711 763 aa12.17□□□□□ -0.46
SNX13-202ENST00000409604 TSPY1Q01534 308 aa12.17□□□□□ -0.46
SNX13-202ENST00000409604 EDRF1Q3B7T1 1238 aa12.17□□□□□ -0.46
SNX13-202ENST00000409604 HP1BP3Q5SSJ5 553 aaPredicted RBP12.17□□□□□ -0.46
SNX13-202ENST00000409604 PRIMPOLQ96LW4 560 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms