RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 CCND1P24385 295 aa5.5□□□□□ -1.53
PMS1-203ENST00000409593 PTGS2P35354 604 aa5.5□□□□□ -1.53
PMS1-203ENST00000409593 SLC6A9P48067 706 aa5.5□□□□□ -1.53
PMS1-203ENST00000409593 PTTG1IPP53801 180 aa5.5□□□□□ -1.53
PMS1-203ENST00000409593 RNASE9P60153 205 aaKnown RBP5.5□□□□□ -1.53
PMS1-203ENST00000409593 RRP12Q5JTH9 1297 aaKnown RBP5.5□□□□□ -1.53
PMS1-203ENST00000409593 FNDC7Q5VTL7 733 aa5.5□□□□□ -1.53
PMS1-203ENST00000409593 SYT12Q8IV01 421 aa5.5□□□□□ -1.53
PMS1-203ENST00000409593 SYNE4Q8N205 404 aa5.5□□□□□ -1.53
PMS1-203ENST00000409593 RAB24Q969Q5 203 aa5.5□□□□□ -1.53
PMS1-203ENST00000409593 MRI1Q9BV20 369 aa5.5□□□□□ -1.53
PMS1-203ENST00000409593 ZNF768Q9H5H4 540 aaKnown RBP5.5□□□□□ -1.53
PMS1-203ENST00000409593 MANSC1Q9H8J5 431 aa5.5□□□□□ -1.53
PMS1-203ENST00000409593 NOP58Q9Y2X3 529 aaKnown RBP5.5□□□□□ -1.53
PMS1-203ENST00000409593 PCDHGA9Q9Y5G4 932 aaKnown RBP5.5□□□□□ -1.53
PMS1-203ENST00000409593 PCDHGA8Q9Y5G5 932 aa5.5□□□□□ -1.53
PMS1-203ENST00000409593 PCDHGA7Q9Y5G6 932 aa5.5□□□□□ -1.53
PMS1-203ENST00000409593 PCDHGA6Q9Y5G7 932 aa5.5□□□□□ -1.53
PMS1-203ENST00000409593 PCDHGA3Q9Y5H0 932 aa5.5□□□□□ -1.53
PMS1-203ENST00000409593 hCG_2014768A0A024R1R8 64 aa5.5□□□□□ -1.53
PMS1-203ENST00000409593 GUCY1A2P33402 732 aa5.5□□□□□ -1.53
PMS1-203ENST00000409593 KIF23Q02241 960 aaPredicted RBP5.5□□□□□ -1.53
PMS1-203ENST00000409593 DRICH1Q6PGQ1 229 aaPredicted RBP5.5□□□□□ -1.53
PMS1-203ENST00000409593 GDF7Q7Z4P5 450 aa5.5□□□□□ -1.53
PMS1-203ENST00000409593 DCLRE1CQ96SD1 692 aaKnown RBP5.5□□□□□ -1.53
PMS1-203ENST00000409593 ASPSCR1Q9BZE9 553 aa5.5□□□□□ -1.53
PMS1-203ENST00000409593 ACTL7AQ9Y615 435 aa5.5□□□□□ -1.53
PMS1-203ENST00000409593 TNKSO95271 1327 aa5.49□□□□□ -1.53
PMS1-203ENST00000409593 ATRNL1Q5VV63 1379 aa5.49□□□□□ -1.53
PMS1-203ENST00000409593 FZD9O00144 591 aa5.49□□□□□ -1.53
PMS1-203ENST00000409593 CYR61O00622 381 aa5.49□□□□□ -1.53
PMS1-203ENST00000409593 PEX11BO96011 259 aa5.49□□□□□ -1.53
PMS1-203ENST00000409593 PCSK1P29120 753 aa5.49□□□□□ -1.53
PMS1-203ENST00000409593 ACVRL1P37023 503 aa5.49□□□□□ -1.53
PMS1-203ENST00000409593 CHN2P52757 468 aa5.49□□□□□ -1.53
PMS1-203ENST00000409593 KLF10Q13118 480 aa5.49□□□□□ -1.53
PMS1-203ENST00000409593 EFCAB2Q5VUJ9 269 aa5.49□□□□□ -1.53
PMS1-203ENST00000409593 NEU4Q8WWR8 484 aaPredicted RBP5.49□□□□□ -1.53
PMS1-203ENST00000409593 AHRRA9YTQ3 701 aa5.48□□□□□ -1.53
PMS1-203ENST00000409593 TEX33O43247 280 aa5.48□□□□□ -1.53
PMS1-203ENST00000409593 ANAPC15P60006 121 aa5.48□□□□□ -1.53
PMS1-203ENST00000409593 FHL2Q14192 279 aa5.48□□□□□ -1.53
PMS1-203ENST00000409593 BRDTQ58F21 947 aaPredicted RBP5.48□□□□□ -1.53
PMS1-203ENST00000409593 ZNF529Q6P280 563 aa5.48□□□□□ -1.53
PMS1-203ENST00000409593 DRC7Q8IY82 874 aa5.48□□□□□ -1.53
PMS1-203ENST00000409593 ZGPATQ8N5A5 531 aaKnown RBP5.48□□□□□ -1.53
PMS1-203ENST00000409593 CASKIN2Q8WXE0 1202 aa5.48□□□□□ -1.53
PMS1-203ENST00000409593 HAS1Q92839 578 aa5.48□□□□□ -1.53
PMS1-203ENST00000409593 CYFIP2Q96F07 1278 aa5.48□□□□□ -1.53
PMS1-203ENST00000409593 BRINP2Q9C0B6 783 aa5.48□□□□□ -1.53
PMS1-203ENST00000409593 GPRC5BQ9NZH0 403 aa5.48□□□□□ -1.53
PMS1-203ENST00000409593 ING1Q9UK53 422 aaPredicted RBP5.48□□□□□ -1.53
PMS1-203ENST00000409593 USP15Q9Y4E8 981 aaPredicted RBP5.48□□□□□ -1.53
PMS1-203ENST00000409593 MYBBP1AQ9BQG0 1328 aaKnown RBP5.48□□□□□ -1.53
PMS1-203ENST00000409593 ZNF185O15231 689 aa5.47□□□□□ -1.53
PMS1-203ENST00000409593 NCR1O76036 304 aa5.47□□□□□ -1.53
PMS1-203ENST00000409593 AMY1AP04745 511 aa5.47□□□□□ -1.53
PMS1-203ENST00000409593 ITGB1P05556 798 aa5.47□□□□□ -1.53
PMS1-203ENST00000409593 SPATA31D3P0C874 917 aa5.47□□□□□ -1.53
PMS1-203ENST00000409593 DDCP20711 480 aa5.47□□□□□ -1.53
PMS1-203ENST00000409593 NR4A1P22736 598 aa5.47□□□□□ -1.53
PMS1-203ENST00000409593 FAM189BP81408 668 aa5.47□□□□□ -1.53
PMS1-203ENST00000409593 UAP1L1Q3KQV9 507 aa5.47□□□□□ -1.53
PMS1-203ENST00000409593 SPATA31D4Q6ZUB0 917 aa5.47□□□□□ -1.53
PMS1-203ENST00000409593 MED25Q71SY5 747 aa5.47□□□□□ -1.53
PMS1-203ENST00000409593 UBE3BQ7Z3V4 1068 aa5.47□□□□□ -1.53
PMS1-203ENST00000409593 RSPH3Q86UC2 560 aa5.47□□□□□ -1.53
PMS1-203ENST00000409593 HDAC10Q969S8 669 aa5.47□□□□□ -1.53
PMS1-203ENST00000409593 TMX3Q96JJ7 454 aa5.47□□□□□ -1.53
PMS1-203ENST00000409593 MYOCQ99972 504 aa5.47□□□□□ -1.53
PMS1-203ENST00000409593 SLC46A2Q9BY10 475 aa5.47□□□□□ -1.53
PMS1-203ENST00000409593 TDP1Q9NUW8 608 aa5.47□□□□□ -1.53
PMS1-203ENST00000409593 PCDHA13Q9Y5I0 950 aa5.47□□□□□ -1.53
PMS1-203ENST00000409593 DRGXA6NNA5 263 aa5.47□□□□□ -1.53
PMS1-203ENST00000409593 DIRC3C9JPN6 131 aa5.47□□□□□ -1.53
PMS1-203ENST00000409593 KRT85P78386 507 aa5.47□□□□□ -1.53
PMS1-203ENST00000409593 MTM1Q13496 603 aa5.47□□□□□ -1.53
PMS1-203ENST00000409593 ODF1Q14990 250 aa5.47□□□□□ -1.53
PMS1-203ENST00000409593 KCNV1Q6PIU1 500 aa5.47□□□□□ -1.53
PMS1-203ENST00000409593 PLXDC1Q8IUK5 500 aa5.47□□□□□ -1.53
PMS1-203ENST00000409593 TEX101Q9BY14 249 aa5.47□□□□□ -1.53
PMS1-203ENST00000409593 LIMCH1Q9UPQ0 1083 aa5.47□□□□□ -1.53
PMS1-203ENST00000409593 CHST2Q9Y4C5 530 aa5.47□□□□□ -1.53
PMS1-203ENST00000409593 PNPLA7Q6ZV29 1317 aa5.46□□□□□ -1.53
PMS1-203ENST00000409593 CCDC154A6NI56 674 aa5.46□□□□□ -1.54
PMS1-203ENST00000409593 RNASET2O00584 256 aaKnown RBP5.46□□□□□ -1.54
PMS1-203ENST00000409593 KIAA0391O15091 583 aaKnown RBP5.46□□□□□ -1.54
PMS1-203ENST00000409593 HTRA2O43464 458 aaPredicted RBP5.46□□□□□ -1.54
PMS1-203ENST00000409593 POMCP01189 267 aa5.46□□□□□ -1.54
PMS1-203ENST00000409593 SLPIP03973 132 aa5.46□□□□□ -1.54
PMS1-203ENST00000409593 ZSCAN20P17040 1043 aaPredicted RBP5.46□□□□□ -1.54
PMS1-203ENST00000409593 LAG3P18627 525 aa5.46□□□□□ -1.54
PMS1-203ENST00000409593 CREMQ03060 361 aa5.46□□□□□ -1.54
PMS1-203ENST00000409593 KRTAP1-1Q07627 177 aa5.46□□□□□ -1.54
PMS1-203ENST00000409593 C3orf36Q3SXR2 165 aa5.46□□□□□ -1.54
PMS1-203ENST00000409593 TIGD2Q4W5G0 525 aa5.46□□□□□ -1.54
PMS1-203ENST00000409593 PDCD4Q53EL6 469 aaKnown RBP5.46□□□□□ -1.54
PMS1-203ENST00000409593 OTUD7BQ6GQQ9 843 aa5.46□□□□□ -1.54
PMS1-203ENST00000409593 LRRC55Q6ZSA7 311 aa5.46□□□□□ -1.54
PMS1-203ENST00000409593 ZBTB46Q86UZ6 589 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms