RNA–Protein interactions for RNA: ENST00000409050.1

SCN1A-203, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 5,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-203ENST00000409050 TEKT4Q8WW24 435 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 ZFATQ9P243 1243 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 ERBB3P21860 1342 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 ADCY10Q96PN6 1610 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 CARNS1A5YM72 827 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 KRT87PA6NCN2 255 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 CES2O00748 559 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 FKBP6O75344 327 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 DGAT1O75907 488 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 SNUPNO95149 360 aaKnown RBP6.42□□□□□ -1.38
SCN1A-203ENST00000409050 GHRP10912 638 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 SKOR1P84550 965 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 PDK1Q15118 436 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 ZNF544Q6NX49 715 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 CCNI2Q6ZMN8 369 aaPredicted RBP6.42□□□□□ -1.38
SCN1A-203ENST00000409050 ADCK1Q86TW2 530 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 SFR1Q86XK3 245 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 PPM1NQ8N819 430 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 SH3GL1Q99961 368 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 CARD9Q9H257 536 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 ADA2Q9NZK5 511 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 USP21Q9UK80 565 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 JAG2Q9Y219 1238 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 SESN1Q9Y6P5 492 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 CPDO75976 1380 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 CD4P01730 458 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 HIST1H2AGP0C0S8 130 aaPredicted RBP6.42□□□□□ -1.38
SCN1A-203ENST00000409050 HIST1H2ADP20671 130 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 GARTP22102 1010 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 GTF2H1P32780 548 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 PSMC1P62191 440 aaKnown RBP6.42□□□□□ -1.38
SCN1A-203ENST00000409050 DYNLT1P63172 113 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 RIPPLY1Q0D2K3 151 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 LRRC41Q15345 812 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 MOXD1Q6UVY6 613 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 ZNF589Q86UQ0 364 aaPredicted RBP6.42□□□□□ -1.38
SCN1A-203ENST00000409050 PLD3Q8IV08 490 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 MASTLQ96GX5 879 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 MAGED4Q96JG8 741 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 HIST1H2AHQ96KK5 128 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 RNPC3Q96LT9 517 aaKnown RBP6.42□□□□□ -1.38
SCN1A-203ENST00000409050 HIST1H2AJQ99878 128 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 SENP7Q9BQF6 1050 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 H2AFJQ9BTM1 129 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 GANQ9H2C0 597 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 SP110Q9HB58 689 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 METP08581 1390 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 MRPS15P82914 257 aaKnown RBP6.42□□□□□ -1.38
SCN1A-203ENST00000409050 GPS1Q13098 491 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 VEPH1Q14D04 833 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 TTC39BQ5VTQ0 682 aaPredicted RBP6.42□□□□□ -1.38
SCN1A-203ENST00000409050 WDR93Q6P2C0 686 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 FASTKD5Q7L8L6 764 aaKnown RBP6.42□□□□□ -1.38
SCN1A-203ENST00000409050 ZNF473Q8WTR7 871 aaKnown RBP6.42□□□□□ -1.38
SCN1A-203ENST00000409050 ANKRD7Q92527 254 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 SLC38A7Q9NVC3 462 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 PRKAG2Q9UGJ0 569 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 ARHGEF40Q8TER5 1519 aa6.42□□□□□ -1.38
SCN1A-203ENST00000409050 POTECB2RU33 542 aa6.41□□□□□ -1.38
SCN1A-203ENST00000409050 TCP10L2B9ZVM9 353 aa6.41□□□□□ -1.38
SCN1A-203ENST00000409050 CFAP99D6REC4 459 aa6.41□□□□□ -1.38
SCN1A-203ENST00000409050 KLHL41O60662 606 aa6.41□□□□□ -1.38
SCN1A-203ENST00000409050 FTLP02792 175 aaPredicted RBP6.41□□□□□ -1.38
SCN1A-203ENST00000409050 SERPINB1P30740 379 aa6.41□□□□□ -1.38
SCN1A-203ENST00000409050 KRT20P35900 424 aa6.41□□□□□ -1.38
SCN1A-203ENST00000409050 PRCPP42785 496 aa6.41□□□□□ -1.38
SCN1A-203ENST00000409050 ZNF135P52742 658 aaPredicted RBP6.41□□□□□ -1.38
SCN1A-203ENST00000409050 PEX3P56589 373 aa6.41□□□□□ -1.38
SCN1A-203ENST00000409050 CYP27A1Q02318 531 aa6.41□□□□□ -1.38
SCN1A-203ENST00000409050 TOB2Q14106 344 aaPredicted RBP6.41□□□□□ -1.38
SCN1A-203ENST00000409050 MEI1Q5TIA1 1274 aa6.41□□□□□ -1.38
SCN1A-203ENST00000409050 KDM7AQ6ZMT4 941 aa6.41□□□□□ -1.38
SCN1A-203ENST00000409050 DNAJC9Q8WXX5 260 aa6.41□□□□□ -1.38
SCN1A-203ENST00000409050 LPAR1Q92633 364 aa6.41□□□□□ -1.38
SCN1A-203ENST00000409050 PGBD4Q96DM1 585 aa6.41□□□□□ -1.38
SCN1A-203ENST00000409050 OSBPL8Q9BZF1 889 aa6.41□□□□□ -1.38
SCN1A-203ENST00000409050 MMADHCQ9H3L0 296 aaPredicted RBP6.41□□□□□ -1.38
SCN1A-203ENST00000409050 RUBCNLQ9H714 662 aa6.41□□□□□ -1.38
SCN1A-203ENST00000409050 ZNF302Q9NR11 478 aa6.41□□□□□ -1.38
SCN1A-203ENST00000409050 AIPL1Q9NZN9 384 aa6.41□□□□□ -1.38
SCN1A-203ENST00000409050 FBXL5Q9UKA1 691 aa6.41□□□□□ -1.38
SCN1A-203ENST00000409050 KIF1BO60333 1816 aa6.41□□□□□ -1.38
SCN1A-203ENST00000409050 USP17L5A8MUK1 530 aa6.41□□□□□ -1.38
SCN1A-203ENST00000409050 DIAPH2O60879 1101 aa6.41□□□□□ -1.38
SCN1A-203ENST00000409050 WDR47O94967 919 aa6.41□□□□□ -1.38
SCN1A-203ENST00000409050 IFNA14P01570 189 aa6.41□□□□□ -1.38
SCN1A-203ENST00000409050 PNPLA4P41247 253 aa6.41□□□□□ -1.38
SCN1A-203ENST00000409050 GUCY1A3Q02108 690 aa6.41□□□□□ -1.38
SCN1A-203ENST00000409050 SGSM1Q2NKQ1 1148 aa6.41□□□□□ -1.38
SCN1A-203ENST00000409050 AARS2Q5JTZ9 985 aaKnown RBP6.41□□□□□ -1.38
SCN1A-203ENST00000409050 RABGAP1LQ5R372 815 aa6.41□□□□□ -1.38
SCN1A-203ENST00000409050 LVRNQ6Q4G3 990 aa6.41□□□□□ -1.38
SCN1A-203ENST00000409050 TRPM8Q7Z2W7 1104 aa6.41□□□□□ -1.38
SCN1A-203ENST00000409050 PALB2Q86YC2 1186 aa6.41□□□□□ -1.38
SCN1A-203ENST00000409050 C7orf31Q8N865 590 aa6.41□□□□□ -1.38
SCN1A-203ENST00000409050 TRIM63Q969Q1 353 aa6.41□□□□□ -1.38
SCN1A-203ENST00000409050 MAPRE3Q9UPY8 281 aa6.41□□□□□ -1.38
SCN1A-203ENST00000409050 CDYLQ9Y232 598 aa6.41□□□□□ -1.38
SCN1A-203ENST00000409050 STARD13Q9Y3M8 1113 aa6.41□□□□□ -1.38
SCN1A-203ENST00000409050 A0A0A6YYK5 440 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms