RNA–Protein interactions for RNA: ENST00000409022.2

PTPN18-203, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-203ENST00000409022 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.28■□□□□ 0.84
PTPN18-203ENST00000409022 PRR33A8MZF0 331 aa20.27■□□□□ 0.84
PTPN18-203ENST00000409022 TEX28O15482 410 aa20.27■□□□□ 0.84
PTPN18-203ENST00000409022 CLDN3O15551 220 aa20.27■□□□□ 0.84
PTPN18-203ENST00000409022 TRAPPC3O43617 180 aa20.27■□□□□ 0.84
PTPN18-203ENST00000409022 PROZP22891 400 aa20.27■□□□□ 0.84
PTPN18-203ENST00000409022 MARCKSP29966 332 aaPredicted RBP20.27■□□□□ 0.84
PTPN18-203ENST00000409022 DDIT3P35638 169 aa20.27■□□□□ 0.84
PTPN18-203ENST00000409022 NCKAP1LP55160 1127 aa20.27■□□□□ 0.84
PTPN18-203ENST00000409022 NOLC1Q14978 699 aaKnown RBP eCLIP20.27■□□□□ 0.84
PTPN18-203ENST00000409022 PTPAQ15257 358 aa20.27■□□□□ 0.84
PTPN18-203ENST00000409022 KYAT1Q16773 422 aa20.27■□□□□ 0.84
PTPN18-203ENST00000409022 DCLRE1AQ6PJP8 1040 aa20.27■□□□□ 0.84
PTPN18-203ENST00000409022 CYP26C1Q6V0L0 522 aa20.27■□□□□ 0.84
PTPN18-203ENST00000409022 TAS1R3Q7RTX0 852 aa20.27■□□□□ 0.84
PTPN18-203ENST00000409022 KRI1Q8N9T8 703 aaKnown RBP20.27■□□□□ 0.84
PTPN18-203ENST00000409022 DDX27Q96GQ7 796 aaKnown RBP20.27■□□□□ 0.84
PTPN18-203ENST00000409022 REEP2Q9BRK0 252 aa20.27■□□□□ 0.84
PTPN18-203ENST00000409022 LRFN3Q9BTN0 628 aa20.27■□□□□ 0.84
PTPN18-203ENST00000409022 TTPALQ9BTX7 342 aa20.27■□□□□ 0.84
PTPN18-203ENST00000409022 GPR62Q9BZJ7 368 aa20.27■□□□□ 0.84
PTPN18-203ENST00000409022 ZHX3Q9H4I2 956 aa20.27■□□□□ 0.84
PTPN18-203ENST00000409022 ANKFY1Q9P2R3 1169 aa20.27■□□□□ 0.84
PTPN18-203ENST00000409022 MUTYHQ9UIF7 546 aa20.27■□□□□ 0.84
PTPN18-203ENST00000409022 MORC2Q9Y6X9 1032 aaPredicted RBP20.27■□□□□ 0.84
PTPN18-203ENST00000409022 KIF4AO95239 1232 aa20.26■□□□□ 0.83
PTPN18-203ENST00000409022 HARSP12081 509 aaKnown RBP20.26■□□□□ 0.83
PTPN18-203ENST00000409022 OSTNP61366 133 aa20.26■□□□□ 0.83
PTPN18-203ENST00000409022 CACNB1Q02641 598 aaPredicted RBP20.26■□□□□ 0.83
PTPN18-203ENST00000409022 CEBPZQ03701 1054 aaKnown RBP20.26■□□□□ 0.83
PTPN18-203ENST00000409022 MCM6Q14566 821 aa20.26■□□□□ 0.83
PTPN18-203ENST00000409022 ARSHQ5FYA8 562 aa20.26■□□□□ 0.83
PTPN18-203ENST00000409022 GLRA4Q5JXX5 417 aa20.26■□□□□ 0.83
PTPN18-203ENST00000409022 FAM171A1Q5VUB5 890 aa20.26■□□□□ 0.83
PTPN18-203ENST00000409022 C15orf39Q6ZRI6 1047 aa20.26■□□□□ 0.83
PTPN18-203ENST00000409022 HAUS6Q7Z4H7 955 aa20.26■□□□□ 0.83
PTPN18-203ENST00000409022 KCNN1Q92952 543 aa20.26■□□□□ 0.83
PTPN18-203ENST00000409022 ZNF396Q96N95 335 aaPredicted RBP20.26■□□□□ 0.83
PTPN18-203ENST00000409022 PPP1R10Q96QC0 940 aaKnown RBP20.26■□□□□ 0.83
PTPN18-203ENST00000409022 PLEKHA4Q9H4M7 779 aa20.26■□□□□ 0.83
PTPN18-203ENST00000409022 TSHZ2Q9NRE2 1034 aa20.26■□□□□ 0.83
PTPN18-203ENST00000409022 BLOC1S4Q9NUP1 217 aa20.26■□□□□ 0.83
PTPN18-203ENST00000409022 FBXO2Q9UK22 296 aaPredicted RBP20.26■□□□□ 0.83
PTPN18-203ENST00000409022 HCN4Q9Y3Q4 1203 aa20.26■□□□□ 0.83
PTPN18-203ENST00000409022 GTF3C3Q9Y5Q9 886 aa20.26■□□□□ 0.83
PTPN18-203ENST00000409022 NPHP3-ACAD11A0A0J9YXS1 232 aa20.25■□□□□ 0.83
PTPN18-203ENST00000409022 SMIM28A0A1B0GU29 152 aa20.25■□□□□ 0.83
PTPN18-203ENST00000409022 F8W810 466 aa20.25■□□□□ 0.83
PTPN18-203ENST00000409022 TMEM189-UBE2V1I3L0A0 370 aa20.25■□□□□ 0.83
PTPN18-203ENST00000409022 K7ENM7 598 aa20.25■□□□□ 0.83
PTPN18-203ENST00000409022 TRAK2O60296 914 aa20.25■□□□□ 0.83
PTPN18-203ENST00000409022 B3GAT3O94766 335 aa20.25■□□□□ 0.83
PTPN18-203ENST00000409022 LIG4P49917 911 aa20.25■□□□□ 0.83
PTPN18-203ENST00000409022 GRIN1Q05586 938 aa20.25■□□□□ 0.83
PTPN18-203ENST00000409022 RRAGBQ5VZM2 374 aa20.25■□□□□ 0.83
PTPN18-203ENST00000409022 TMC5Q6UXY8 1006 aa20.25■□□□□ 0.83
PTPN18-203ENST00000409022 CCDC73Q6ZRK6 1079 aa20.25■□□□□ 0.83
PTPN18-203ENST00000409022 GPR149Q86SP6 731 aa20.25■□□□□ 0.83
PTPN18-203ENST00000409022 CEP57Q86XR8 500 aa20.25■□□□□ 0.83
PTPN18-203ENST00000409022 PLCD3Q8N3E9 789 aa20.25■□□□□ 0.83
PTPN18-203ENST00000409022 C12orf76Q8N812 135 aaPredicted RBP20.25■□□□□ 0.83
PTPN18-203ENST00000409022 CMASQ8NFW8 434 aaPredicted RBP20.25■□□□□ 0.83
PTPN18-203ENST00000409022 HASPINQ8TF76 798 aa20.25■□□□□ 0.83
PTPN18-203ENST00000409022 RABGGTAQ92696 567 aa20.25■□□□□ 0.83
PTPN18-203ENST00000409022 MAN1C1Q9NR34 630 aa20.25■□□□□ 0.83
PTPN18-203ENST00000409022 USTQ9Y2C2 406 aa20.25■□□□□ 0.83
PTPN18-203ENST00000409022 HNRNPDLO14979 420 aaKnown RBP20.24■□□□□ 0.83
PTPN18-203ENST00000409022 KCNE1P15382 129 aa20.24■□□□□ 0.83
PTPN18-203ENST00000409022 ZNF131P52739 623 aa20.24■□□□□ 0.83
PTPN18-203ENST00000409022 MCL1Q07820 350 aa20.24■□□□□ 0.83
PTPN18-203ENST00000409022 SLC39A14Q15043 492 aa20.24■□□□□ 0.83
PTPN18-203ENST00000409022 STK38Q15208 465 aa20.24■□□□□ 0.83
PTPN18-203ENST00000409022 NAB2Q15742 525 aa20.24■□□□□ 0.83
PTPN18-203ENST00000409022 XKR4Q5GH76 650 aa20.24■□□□□ 0.83
PTPN18-203ENST00000409022 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.24■□□□□ 0.83
PTPN18-203ENST00000409022 CCDC149Q6ZUS6 474 aa20.24■□□□□ 0.83
PTPN18-203ENST00000409022 CEP120Q8N960 986 aa20.24■□□□□ 0.83
PTPN18-203ENST00000409022 TDRD5Q8NAT2 981 aaKnown RBP20.24■□□□□ 0.83
PTPN18-203ENST00000409022 PIK3R5Q8WYR1 880 aa20.24■□□□□ 0.83
PTPN18-203ENST00000409022 EDAQ92838 391 aa20.24■□□□□ 0.83
PTPN18-203ENST00000409022 ACSF2Q96CM8 615 aaPredicted RBP20.24■□□□□ 0.83
PTPN18-203ENST00000409022 EPSTI1Q96J88 318 aa20.24■□□□□ 0.83
PTPN18-203ENST00000409022 SNX27Q96L92 541 aa20.24■□□□□ 0.83
PTPN18-203ENST00000409022 PAAF1Q9BRP4 392 aa20.24■□□□□ 0.83
PTPN18-203ENST00000409022 POMKQ9H5K3 350 aa20.24■□□□□ 0.83
PTPN18-203ENST00000409022 FAM86C2PA6NEL3 165 aa20.23■□□□□ 0.83
PTPN18-203ENST00000409022 CLTAP09496 248 aa20.23■□□□□ 0.83
PTPN18-203ENST00000409022 PSMD5Q16401 504 aa20.23■□□□□ 0.83
PTPN18-203ENST00000409022 FAM173BQ6P4H8 233 aa20.23■□□□□ 0.83
PTPN18-203ENST00000409022 ALKAL1Q6UXT8 129 aa20.23■□□□□ 0.83
PTPN18-203ENST00000409022 SV2BQ7L1I2 683 aa20.23■□□□□ 0.83
PTPN18-203ENST00000409022 STAMQ92783 540 aa20.23■□□□□ 0.83
PTPN18-203ENST00000409022 B3GALT6Q96L58 329 aa20.23■□□□□ 0.83
PTPN18-203ENST00000409022 USP28Q96RU2 1077 aa20.23■□□□□ 0.83
PTPN18-203ENST00000409022 RHOBTB2Q9BYZ6 727 aa20.23■□□□□ 0.83
PTPN18-203ENST00000409022 PLEKHA5Q9HAU0 1116 aa20.23■□□□□ 0.83
PTPN18-203ENST00000409022 CNTN3Q9P232 1028 aa20.23■□□□□ 0.83
PTPN18-203ENST00000409022 TBX20Q9UMR3 447 aa20.23■□□□□ 0.83
PTPN18-203ENST00000409022 ABLIM1O14639 778 aa20.22■□□□□ 0.83
PTPN18-203ENST00000409022 RPL9P32969 192 aaKnown RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms