RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 RPF1Q9H9Y2 349 aaKnown RBP11.15□□□□□ -0.62
SNORD88C-201ENST00000408061 PLEKHA5Q9HAU0 1116 aa11.15□□□□□ -0.62
SNORD88C-201ENST00000408061 UBE2TQ9NPD8 197 aaPredicted RBP11.15□□□□□ -0.62
SNORD88C-201ENST00000408061 XPNPEP3Q9NQH7 507 aa11.15□□□□□ -0.62
SNORD88C-201ENST00000408061 ANKFY1Q9P2R3 1169 aa11.15□□□□□ -0.62
SNORD88C-201ENST00000408061 FHOD1Q9Y613 1164 aa11.15□□□□□ -0.62
SNORD88C-201ENST00000408061 MOXD2PA6NHM9 499 aa11.14□□□□□ -0.63
SNORD88C-201ENST00000408061 BTNL10A8MVZ5 291 aa11.14□□□□□ -0.63
SNORD88C-201ENST00000408061 F8VZ95 297 aa11.14□□□□□ -0.63
SNORD88C-201ENST00000408061 GPR32O75388 356 aa11.14□□□□□ -0.63
SNORD88C-201ENST00000408061 VTNP04004 478 aa11.14□□□□□ -0.63
SNORD88C-201ENST00000408061 DLATP10515 647 aaKnown RBP11.14□□□□□ -0.63
SNORD88C-201ENST00000408061 PRKAR2AP13861 404 aaKnown RBP11.14□□□□□ -0.63
SNORD88C-201ENST00000408061 DARSP14868 501 aaKnown RBP11.14□□□□□ -0.63
SNORD88C-201ENST00000408061 MAGEA1P43355 309 aa11.14□□□□□ -0.63
SNORD88C-201ENST00000408061 MAP2K1Q02750 393 aaPredicted RBP11.14□□□□□ -0.63
SNORD88C-201ENST00000408061 MTF1Q14872 753 aa11.14□□□□□ -0.63
SNORD88C-201ENST00000408061 PHLDB3Q6NSJ2 640 aa11.14□□□□□ -0.63
SNORD88C-201ENST00000408061 PPP1R2P3Q6NXS1 205 aa11.14□□□□□ -0.63
SNORD88C-201ENST00000408061 NOTUMQ6P988 496 aa11.14□□□□□ -0.63
SNORD88C-201ENST00000408061 ANKRD36BP1Q96IX9 119 aa11.14□□□□□ -0.63
SNORD88C-201ENST00000408061 HAPLN2Q9GZV7 340 aa11.14□□□□□ -0.63
SNORD88C-201ENST00000408061 CDT1Q9H211 546 aa11.14□□□□□ -0.63
SNORD88C-201ENST00000408061 PDE11AQ9HCR9 933 aa11.14□□□□□ -0.63
SNORD88C-201ENST00000408061 C1orf112Q9NSG2 853 aa11.14□□□□□ -0.63
SNORD88C-201ENST00000408061 HDAC6Q9UBN7 1215 aa11.14□□□□□ -0.63
SNORD88C-201ENST00000408061 DDX20Q9UHI6 824 aaKnown RBP11.14□□□□□ -0.63
SNORD88C-201ENST00000408061 GTF2IRD1Q9UHL9 959 aa11.14□□□□□ -0.63
SNORD88C-201ENST00000408061 DERAQ9Y315 318 aa11.14□□□□□ -0.63
SNORD88C-201ENST00000408061 M0QZ92 97 aa11.13□□□□□ -0.63
SNORD88C-201ENST00000408061 CAND2O75155 1236 aa11.13□□□□□ -0.63
SNORD88C-201ENST00000408061 PHACTR2O75167 634 aa11.13□□□□□ -0.63
SNORD88C-201ENST00000408061 TNNC2P02585 160 aa11.13□□□□□ -0.63
SNORD88C-201ENST00000408061 ARF4P18085 180 aaPredicted RBP11.13□□□□□ -0.63
SNORD88C-201ENST00000408061 ATICP31939 592 aa11.13□□□□□ -0.63
SNORD88C-201ENST00000408061 GRM5P41594 1212 aa11.13□□□□□ -0.63
SNORD88C-201ENST00000408061 YWHAEP62258 255 aaKnown RBP11.13□□□□□ -0.63
SNORD88C-201ENST00000408061 TUBB4BP68371 445 aa11.13□□□□□ -0.63
SNORD88C-201ENST00000408061 BEX3Q00994 111 aa11.13□□□□□ -0.63
SNORD88C-201ENST00000408061 NAB2Q15742 525 aa11.13□□□□□ -0.63
SNORD88C-201ENST00000408061 IFI16Q16666 785 aaKnown RBP11.13□□□□□ -0.63
SNORD88C-201ENST00000408061 SGSM1Q2NKQ1 1148 aa11.13□□□□□ -0.63
SNORD88C-201ENST00000408061 CCSAPQ6IQ19 270 aaPredicted RBP11.13□□□□□ -0.63
SNORD88C-201ENST00000408061 SLC27A1Q6PCB7 646 aa11.13□□□□□ -0.63
SNORD88C-201ENST00000408061 CATSPER4Q7RTX7 472 aa11.13□□□□□ -0.63
SNORD88C-201ENST00000408061 ZNF677Q86XU0 584 aa11.13□□□□□ -0.63
SNORD88C-201ENST00000408061 FAM71AQ8IYT1 594 aa11.13□□□□□ -0.63
SNORD88C-201ENST00000408061 TTC39CQ8N584 583 aa11.13□□□□□ -0.63
SNORD88C-201ENST00000408061 ARRDC4Q8NCT1 418 aa11.13□□□□□ -0.63
SNORD88C-201ENST00000408061 ZSWIM2Q8NEG5 633 aa11.13□□□□□ -0.63
SNORD88C-201ENST00000408061 CD99L2Q8TCZ2 262 aa11.13□□□□□ -0.63
SNORD88C-201ENST00000408061 SHC3Q92529 594 aa11.13□□□□□ -0.63
SNORD88C-201ENST00000408061 ZNF516Q92618 1163 aa11.13□□□□□ -0.63
SNORD88C-201ENST00000408061 CCDC94Q9BW85 323 aaPredicted RBP11.13□□□□□ -0.63
SNORD88C-201ENST00000408061 IFIH1Q9BYX4 1025 aaKnown RBP11.13□□□□□ -0.63
SNORD88C-201ENST00000408061 PDZD7Q9H5P4 517 aa11.13□□□□□ -0.63
SNORD88C-201ENST00000408061 MINDY3Q9H8M7 445 aa11.13□□□□□ -0.63
SNORD88C-201ENST00000408061 HMX1Q9NP08 348 aaPredicted RBP11.13□□□□□ -0.63
SNORD88C-201ENST00000408061 PCDHA13Q9Y5I0 950 aa11.13□□□□□ -0.63
SNORD88C-201ENST00000408061 SQORQ9Y6N5 450 aa11.13□□□□□ -0.63
SNORD88C-201ENST00000408061 FOXN3O00409 490 aaPredicted RBP11.12□□□□□ -0.63
SNORD88C-201ENST00000408061 TREHO43280 583 aa11.12□□□□□ -0.63
SNORD88C-201ENST00000408061 EVI5O60447 810 aa11.12□□□□□ -0.63
SNORD88C-201ENST00000408061 TSPAN1O60635 241 aa11.12□□□□□ -0.63
SNORD88C-201ENST00000408061 ECM2O94769 699 aaPredicted RBP11.12□□□□□ -0.63
SNORD88C-201ENST00000408061 HLA-DRAP01903 254 aa11.12□□□□□ -0.63
SNORD88C-201ENST00000408061 EDN1P05305 212 aa11.12□□□□□ -0.63
SNORD88C-201ENST00000408061 GJB1P08034 283 aa11.12□□□□□ -0.63
SNORD88C-201ENST00000408061 IQCF3P0C7M6 154 aa11.12□□□□□ -0.63
SNORD88C-201ENST00000408061 TMEM191BP0C7N4 346 aa11.12□□□□□ -0.63
SNORD88C-201ENST00000408061 STAG3L1P0CL83 205 aa11.12□□□□□ -0.63
SNORD88C-201ENST00000408061 CASQ1P31415 396 aa11.12□□□□□ -0.63
SNORD88C-201ENST00000408061 GNG11P61952 73 aa11.12□□□□□ -0.63
SNORD88C-201ENST00000408061 PTK2Q05397 1052 aa11.12□□□□□ -0.63
SNORD88C-201ENST00000408061 BIRC3Q13489 604 aa11.12□□□□□ -0.63
SNORD88C-201ENST00000408061 NBPF20Q3BBV1 942 aa11.12□□□□□ -0.63
SNORD88C-201ENST00000408061 CCDC122Q5T0U0 273 aa11.12□□□□□ -0.63
SNORD88C-201ENST00000408061 TRAPPC11Q7Z392 1133 aa11.12□□□□□ -0.63
SNORD88C-201ENST00000408061 ZBTB33Q86T24 672 aa11.12□□□□□ -0.63
SNORD88C-201ENST00000408061 PPM1KQ8N3J5 372 aa11.12□□□□□ -0.63
SNORD88C-201ENST00000408061 HELQQ8TDG4 1101 aa11.12□□□□□ -0.63
SNORD88C-201ENST00000408061 TAS1R2Q8TE23 839 aa11.12□□□□□ -0.63
SNORD88C-201ENST00000408061 DNAJB3Q8WWF6 145 aa11.12□□□□□ -0.63
SNORD88C-201ENST00000408061 ACAP3Q96P50 834 aa11.12□□□□□ -0.63
SNORD88C-201ENST00000408061 POP1Q99575 1024 aaKnown RBP11.12□□□□□ -0.63
SNORD88C-201ENST00000408061 DESI2Q9BSY9 194 aa11.12□□□□□ -0.63
SNORD88C-201ENST00000408061 BEGAINQ9BUH8 593 aa11.12□□□□□ -0.63
SNORD88C-201ENST00000408061 CELF4Q9BZC1 486 aaKnown RBP11.12□□□□□ -0.63
SNORD88C-201ENST00000408061 CHST12Q9NRB3 414 aa11.12□□□□□ -0.63
SNORD88C-201ENST00000408061 C2CD2Q9Y426 696 aa11.12□□□□□ -0.63
SNORD88C-201ENST00000408061 TRIP12Q14669 1992 aaPredicted RBP11.12□□□□□ -0.63
SNORD88C-201ENST00000408061 A0A0A6YYK5 440 aaPredicted RBP11.11□□□□□ -0.63
SNORD88C-201ENST00000408061 XPOTO43592 962 aaKnown RBP11.11□□□□□ -0.63
SNORD88C-201ENST00000408061 STAU1O95793 577 aaKnown RBP11.11□□□□□ -0.63
SNORD88C-201ENST00000408061 PGK1P00558 417 aa11.11□□□□□ -0.63
SNORD88C-201ENST00000408061 ASS1P00966 412 aaKnown RBP11.11□□□□□ -0.63
SNORD88C-201ENST00000408061 ASGR1P07306 291 aa11.11□□□□□ -0.63
SNORD88C-201ENST00000408061 GZMAP12544 262 aa11.11□□□□□ -0.63
SNORD88C-201ENST00000408061 TNFAIP3P21580 790 aa11.11□□□□□ -0.63
SNORD88C-201ENST00000408061 ARHGAP25P42331 645 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms