RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 ABCD1P33897 745 aa13.98□□□□□ -0.17
SMARCB1-203ENST00000407082 ZNF131P52739 623 aa13.98□□□□□ -0.17
SMARCB1-203ENST00000407082 WDR5P61964 334 aaKnown RBP13.98□□□□□ -0.17
SMARCB1-203ENST00000407082 DEFB103AP81534 67 aa13.98□□□□□ -0.17
SMARCB1-203ENST00000407082 KRT76Q01546 638 aa13.98□□□□□ -0.17
SMARCB1-203ENST00000407082 CETN1Q12798 172 aa13.98□□□□□ -0.17
SMARCB1-203ENST00000407082 CTTNQ14247 550 aaKnown RBP13.98□□□□□ -0.17
SMARCB1-203ENST00000407082 PPP2R5AQ15172 486 aa13.98□□□□□ -0.17
SMARCB1-203ENST00000407082 DGKDQ16760 1214 aa13.98□□□□□ -0.17
SMARCB1-203ENST00000407082 RDM1Q8NG50 284 aa13.98□□□□□ -0.17
SMARCB1-203ENST00000407082 SEPT1Q8WYJ6 367 aa13.98□□□□□ -0.17
SMARCB1-203ENST00000407082 CCDC43Q96MW1 224 aaKnown RBP13.98□□□□□ -0.17
SMARCB1-203ENST00000407082 GPR20Q99678 358 aa13.98□□□□□ -0.17
SMARCB1-203ENST00000407082 LARSQ9P2J5 1176 aaKnown RBP13.98□□□□□ -0.17
SMARCB1-203ENST00000407082 KCNG1Q9UIX4 513 aa13.98□□□□□ -0.17
SMARCB1-203ENST00000407082 FHOD1Q9Y613 1164 aa13.98□□□□□ -0.17
SMARCB1-203ENST00000407082 DOCK5Q9H7D0 1870 aa13.97□□□□□ -0.17
SMARCB1-203ENST00000407082 MYH11P35749 1972 aa13.97□□□□□ -0.17
SMARCB1-203ENST00000407082 GRXCR2A6NFK2 248 aa13.97□□□□□ -0.17
SMARCB1-203ENST00000407082 CHMP2AO43633 222 aa13.97□□□□□ -0.17
SMARCB1-203ENST00000407082 PPFIA4O75335 1185 aa13.97□□□□□ -0.17
SMARCB1-203ENST00000407082 LYPLA2O95372 231 aa13.97□□□□□ -0.17
SMARCB1-203ENST00000407082 CCNE2O96020 404 aa13.97□□□□□ -0.17
SMARCB1-203ENST00000407082 FERP16591 822 aa13.97□□□□□ -0.17
SMARCB1-203ENST00000407082 SFNP31947 248 aa13.97□□□□□ -0.17
SMARCB1-203ENST00000407082 JAK3P52333 1124 aa13.97□□□□□ -0.17
SMARCB1-203ENST00000407082 NAP1L1P55209 391 aaKnown RBP13.97□□□□□ -0.17
SMARCB1-203ENST00000407082 ACTR2P61160 394 aa13.97□□□□□ -0.17
SMARCB1-203ENST00000407082 CACNB1Q02641 598 aaPredicted RBP13.97□□□□□ -0.17
SMARCB1-203ENST00000407082 RAD51AP2Q09MP3 1159 aa13.97□□□□□ -0.17
SMARCB1-203ENST00000407082 RAPGEF1Q13905 1077 aa13.97□□□□□ -0.17
SMARCB1-203ENST00000407082 SLC18A3Q16572 532 aa13.97□□□□□ -0.17
SMARCB1-203ENST00000407082 PTGISQ16647 500 aa13.97□□□□□ -0.17
SMARCB1-203ENST00000407082 LONRF2Q1L5Z9 754 aa13.97□□□□□ -0.17
SMARCB1-203ENST00000407082 ASTE1Q2TB18 679 aaPredicted RBP13.97□□□□□ -0.17
SMARCB1-203ENST00000407082 CCDC181Q5TID7 509 aa13.97□□□□□ -0.17
SMARCB1-203ENST00000407082 ZNF746Q6NUN9 644 aaPredicted RBP13.97□□□□□ -0.17
SMARCB1-203ENST00000407082 ZNF572Q7Z3I7 529 aaPredicted RBP13.97□□□□□ -0.17
SMARCB1-203ENST00000407082 SLC9A9Q8IVB4 645 aa13.97□□□□□ -0.17
SMARCB1-203ENST00000407082 GLIS3Q8NEA6 775 aa13.97□□□□□ -0.17
SMARCB1-203ENST00000407082 CALR3Q96L12 384 aaKnown RBP13.97□□□□□ -0.17
SMARCB1-203ENST00000407082 RAD9AQ99638 391 aa13.97□□□□□ -0.17
SMARCB1-203ENST00000407082 RUSC1Q9BVN2 902 aa13.97□□□□□ -0.17
SMARCB1-203ENST00000407082 UNC45AQ9H3U1 944 aa13.97□□□□□ -0.17
SMARCB1-203ENST00000407082 NLRC4Q9NPP4 1024 aa13.97□□□□□ -0.17
SMARCB1-203ENST00000407082 ZNF446Q9NWS9 450 aa13.97□□□□□ -0.17
SMARCB1-203ENST00000407082 RGL1Q9NZL6 768 aa13.97□□□□□ -0.17
SMARCB1-203ENST00000407082 INTUQ9ULD6 942 aa13.97□□□□□ -0.17
SMARCB1-203ENST00000407082 SNX12Q9UMY4 172 aa13.97□□□□□ -0.17
SMARCB1-203ENST00000407082 SAMM50Q9Y512 469 aa13.97□□□□□ -0.17
SMARCB1-203ENST00000407082 TET1Q8NFU7 2136 aa13.96□□□□□ -0.17
SMARCB1-203ENST00000407082 COL4A4P53420 1690 aaPredicted RBP13.96□□□□□ -0.17
SMARCB1-203ENST00000407082 A0A0U1RQJ8 604 aa13.96□□□□□ -0.17
SMARCB1-203ENST00000407082 GSTTP1A0A1W2PQM5 241 aa13.96□□□□□ -0.17
SMARCB1-203ENST00000407082 MACROD2A1Z1Q3 448 aa13.96□□□□□ -0.17
SMARCB1-203ENST00000407082 KPNA6O60684 536 aa13.96□□□□□ -0.17
SMARCB1-203ENST00000407082 ATP1A1P05023 1023 aaKnown RBP13.96□□□□□ -0.17
SMARCB1-203ENST00000407082 MYBP10242 640 aa13.96□□□□□ -0.17
SMARCB1-203ENST00000407082 KRT13P13646 458 aa13.96□□□□□ -0.17
SMARCB1-203ENST00000407082 TCF7P36402 384 aaPredicted RBP13.96□□□□□ -0.17
SMARCB1-203ENST00000407082 PRKCIP41743 596 aa13.96□□□□□ -0.17
SMARCB1-203ENST00000407082 ERVK-21P61565 698 aa13.96□□□□□ -0.17
SMARCB1-203ENST00000407082 CYP27A1Q02318 531 aa13.96□□□□□ -0.17
SMARCB1-203ENST00000407082 PUS10Q3MIT2 529 aaKnown RBP13.96□□□□□ -0.17
SMARCB1-203ENST00000407082 GLE1Q53GS7 698 aaKnown RBP13.96□□□□□ -0.17
SMARCB1-203ENST00000407082 KLHDC7AQ5VTJ3 777 aa13.96□□□□□ -0.17
SMARCB1-203ENST00000407082 TCERG1LQ5VWI1 586 aa13.96□□□□□ -0.17
SMARCB1-203ENST00000407082 NFRKBQ6P4R8 1299 aa13.96□□□□□ -0.17
SMARCB1-203ENST00000407082 B3GNT9Q6UX72 402 aa13.96□□□□□ -0.17
SMARCB1-203ENST00000407082 ZNF720Q7Z2F6 126 aa13.96□□□□□ -0.17
SMARCB1-203ENST00000407082 FAM186BQ8IYM0 893 aa13.96□□□□□ -0.17
SMARCB1-203ENST00000407082 FBXO22Q8NEZ5 403 aa13.96□□□□□ -0.17
SMARCB1-203ENST00000407082 TMEM174Q8WUU8 243 aa13.96□□□□□ -0.17
SMARCB1-203ENST00000407082 ATRIPQ8WXE1 791 aa13.96□□□□□ -0.17
SMARCB1-203ENST00000407082 LACRTQ9GZZ8 138 aa13.96□□□□□ -0.17
SMARCB1-203ENST00000407082 GANQ9H2C0 597 aa13.96□□□□□ -0.17
SMARCB1-203ENST00000407082 ANKZF1Q9H8Y5 726 aa13.96□□□□□ -0.17
SMARCB1-203ENST00000407082 EXOC7Q9UPT5 735 aa13.96□□□□□ -0.17
SMARCB1-203ENST00000407082 LINC01553A4QN01 128 aa13.95□□□□□ -0.18
SMARCB1-203ENST00000407082 WDR64B1ANS9 1081 aa13.95□□□□□ -0.18
SMARCB1-203ENST00000407082 MAPK13O15264 365 aa13.95□□□□□ -0.18
SMARCB1-203ENST00000407082 NOL4O94818 638 aa13.95□□□□□ -0.18
SMARCB1-203ENST00000407082 ATG7O95352 703 aa13.95□□□□□ -0.18
SMARCB1-203ENST00000407082 HOXD8P13378 290 aaPredicted RBP13.95□□□□□ -0.18
SMARCB1-203ENST00000407082 ZSCAN20P17040 1043 aaPredicted RBP13.95□□□□□ -0.18
SMARCB1-203ENST00000407082 STAT1P42224 750 aa13.95□□□□□ -0.18
SMARCB1-203ENST00000407082 QARSP47897 775 aaKnown RBP13.95□□□□□ -0.18
SMARCB1-203ENST00000407082 NAB2Q15742 525 aa13.95□□□□□ -0.18
SMARCB1-203ENST00000407082 ODR4Q5SWX8 454 aa13.95□□□□□ -0.18
SMARCB1-203ENST00000407082 HGSNATQ68CP4 663 aa13.95□□□□□ -0.18
SMARCB1-203ENST00000407082 MIS18BP1Q6P0N0 1132 aa13.95□□□□□ -0.18
SMARCB1-203ENST00000407082 ABHD15Q6UXT9 468 aa13.95□□□□□ -0.18
SMARCB1-203ENST00000407082 HFE2Q6ZVN8 426 aa13.95□□□□□ -0.18
SMARCB1-203ENST00000407082 SYCP3Q8IZU3 236 aa13.95□□□□□ -0.18
SMARCB1-203ENST00000407082 MMGT1Q8N4V1 131 aa13.95□□□□□ -0.18
SMARCB1-203ENST00000407082 PIGOQ8TEQ8 1089 aa13.95□□□□□ -0.18
SMARCB1-203ENST00000407082 HVCN1Q96D96 273 aa13.95□□□□□ -0.18
SMARCB1-203ENST00000407082 DRC1Q96MC2 740 aa13.95□□□□□ -0.18
SMARCB1-203ENST00000407082 MFSD14AQ96MC6 490 aa13.95□□□□□ -0.18
SMARCB1-203ENST00000407082 ACCSQ96QU6 501 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms