RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 CDC42EP4Q9H3Q1 356 aaKnown RBP11.49□□□□□ -0.57
CLIP4-204ENST00000404424 C17orf75Q9HAS0 396 aa11.49□□□□□ -0.57
CLIP4-204ENST00000404424 AVENQ9NQS1 362 aaPredicted RBP11.49□□□□□ -0.57
CLIP4-204ENST00000404424 ZNF219Q9P2Y4 722 aaPredicted RBP11.49□□□□□ -0.57
CLIP4-204ENST00000404424 CNTNAP1P78357 1384 aa11.48□□□□□ -0.57
CLIP4-204ENST00000404424 NFIBO00712 420 aa11.48□□□□□ -0.57
CLIP4-204ENST00000404424 PLSCR1O15162 318 aa11.48□□□□□ -0.57
CLIP4-204ENST00000404424 CLDN3O15551 220 aa11.48□□□□□ -0.57
CLIP4-204ENST00000404424 GRIN3BO60391 1043 aa11.48□□□□□ -0.57
CLIP4-204ENST00000404424 ASNSP08243 561 aa11.48□□□□□ -0.57
CLIP4-204ENST00000404424 MYBL1P10243 752 aa11.48□□□□□ -0.57
CLIP4-204ENST00000404424 MAPK4P31152 587 aa11.48□□□□□ -0.57
CLIP4-204ENST00000404424 MRPS9P82933 396 aaKnown RBP11.48□□□□□ -0.57
CLIP4-204ENST00000404424 KRT17Q04695 432 aa11.48□□□□□ -0.57
CLIP4-204ENST00000404424 SPDYE2Q495Y8 402 aa11.48□□□□□ -0.57
CLIP4-204ENST00000404424 FAM102BQ5T8I3 360 aa11.48□□□□□ -0.57
CLIP4-204ENST00000404424 RHBDF2Q6PJF5 856 aa11.48□□□□□ -0.57
CLIP4-204ENST00000404424 ZNF677Q86XU0 584 aa11.48□□□□□ -0.57
CLIP4-204ENST00000404424 IL31RAQ8NI17 732 aa11.48□□□□□ -0.57
CLIP4-204ENST00000404424 SPIRE2Q8WWL2 714 aa11.48□□□□□ -0.57
CLIP4-204ENST00000404424 NCAPGQ9BPX3 1015 aa11.48□□□□□ -0.57
CLIP4-204ENST00000404424 NTPCRQ9BSD7 190 aaKnown RBP11.48□□□□□ -0.57
CLIP4-204ENST00000404424 QTRT2Q9H974 415 aaKnown RBP11.48□□□□□ -0.57
CLIP4-204ENST00000404424 ACP6Q9NPH0 428 aa11.48□□□□□ -0.57
CLIP4-204ENST00000404424 WDR64B1ANS9 1081 aa11.48□□□□□ -0.57
CLIP4-204ENST00000404424 SLCO1A2P46721 670 aa11.48□□□□□ -0.57
CLIP4-204ENST00000404424 KRT76Q01546 638 aa11.48□□□□□ -0.57
CLIP4-204ENST00000404424 PTK6Q13882 451 aa11.48□□□□□ -0.57
CLIP4-204ENST00000404424 XKR9Q5GH70 373 aa11.48□□□□□ -0.57
CLIP4-204ENST00000404424 EXOC3L1Q86VI1 746 aa11.48□□□□□ -0.57
CLIP4-204ENST00000404424 RDM1Q8NG50 284 aa11.48□□□□□ -0.57
CLIP4-204ENST00000404424 ZKSCAN4Q969J2 545 aaPredicted RBP11.48□□□□□ -0.57
CLIP4-204ENST00000404424 CCDC127Q96BQ5 260 aa11.48□□□□□ -0.57
CLIP4-204ENST00000404424 SNF8Q96H20 258 aa11.48□□□□□ -0.57
CLIP4-204ENST00000404424 JPH2Q9BR39 696 aaPredicted RBP11.48□□□□□ -0.57
CLIP4-204ENST00000404424 GPRC5CQ9NQ84 441 aa11.48□□□□□ -0.57
CLIP4-204ENST00000404424 HAUS2Q9NVX0 235 aa11.48□□□□□ -0.57
CLIP4-204ENST00000404424 TCEAL9Q9UHQ7 104 aa11.48□□□□□ -0.57
CLIP4-204ENST00000404424 SLC12A4Q9UP95 1085 aa11.48□□□□□ -0.57
CLIP4-204ENST00000404424 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.48□□□□□ -0.57
CLIP4-204ENST00000404424 GAS8O95995 478 aa11.47□□□□□ -0.57
CLIP4-204ENST00000404424 VIMP08670 466 aaKnown RBP11.47□□□□□ -0.57
CLIP4-204ENST00000404424 DLATP10515 647 aaKnown RBP11.47□□□□□ -0.57
CLIP4-204ENST00000404424 NPTX2P47972 431 aa11.47□□□□□ -0.57
CLIP4-204ENST00000404424 SPP2Q13103 211 aa11.47□□□□□ -0.57
CLIP4-204ENST00000404424 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.47□□□□□ -0.57
CLIP4-204ENST00000404424 FAM83AQ86UY5 434 aa11.47□□□□□ -0.57
CLIP4-204ENST00000404424 CCDC25Q86WR0 208 aa11.47□□□□□ -0.57
CLIP4-204ENST00000404424 OGFOD1Q8N543 542 aa11.47□□□□□ -0.57
CLIP4-204ENST00000404424 UHMK1Q8TAS1 419 aaKnown RBP11.47□□□□□ -0.57
CLIP4-204ENST00000404424 SYTL5Q8TDW5 730 aaPredicted RBP11.47□□□□□ -0.57
CLIP4-204ENST00000404424 TAS1R2Q8TE23 839 aa11.47□□□□□ -0.57
CLIP4-204ENST00000404424 SAAL1Q96ER3 474 aa11.47□□□□□ -0.57
CLIP4-204ENST00000404424 ASIC3Q9UHC3 531 aa11.47□□□□□ -0.57
CLIP4-204ENST00000404424 ANAPC7Q9UJX3 599 aa11.47□□□□□ -0.57
CLIP4-204ENST00000404424 WDR46O15213 610 aaKnown RBP11.47□□□□□ -0.57
CLIP4-204ENST00000404424 MGRN1O60291 552 aa11.47□□□□□ -0.57
CLIP4-204ENST00000404424 TCEA3O75764 348 aa11.47□□□□□ -0.57
CLIP4-204ENST00000404424 UNGP13051 313 aaPredicted RBP11.47□□□□□ -0.57
CLIP4-204ENST00000404424 SCP2P22307 547 aa11.47□□□□□ -0.57
CLIP4-204ENST00000404424 CENPCQ03188 943 aa11.47□□□□□ -0.57
CLIP4-204ENST00000404424 CYP24A1Q07973 514 aa11.47□□□□□ -0.57
CLIP4-204ENST00000404424 PTP4A2Q12974 167 aa11.47□□□□□ -0.57
CLIP4-204ENST00000404424 UBAP2Q5T6F2 1119 aaKnown RBP11.47□□□□□ -0.57
CLIP4-204ENST00000404424 MSL1Q68DK7 614 aa11.47□□□□□ -0.57
CLIP4-204ENST00000404424 NSMFQ6X4W1 530 aa11.47□□□□□ -0.57
CLIP4-204ENST00000404424 SV2AQ7L0J3 742 aa11.47□□□□□ -0.57
CLIP4-204ENST00000404424 TRPM8Q7Z2W7 1104 aa11.47□□□□□ -0.57
CLIP4-204ENST00000404424 CPNE8Q86YQ8 564 aa11.47□□□□□ -0.57
CLIP4-204ENST00000404424 MCOLN2Q8IZK6 566 aa11.47□□□□□ -0.57
CLIP4-204ENST00000404424 ATL2Q8NHH9 583 aa11.47□□□□□ -0.57
CLIP4-204ENST00000404424 C1orf54Q8WWF1 131 aa11.47□□□□□ -0.57
CLIP4-204ENST00000404424 ARHGEF2Q92974 986 aaKnown RBP11.47□□□□□ -0.57
CLIP4-204ENST00000404424 ELAC2Q9BQ52 826 aaKnown RBP11.47□□□□□ -0.57
CLIP4-204ENST00000404424 TRAIPQ9BWF2 469 aa11.47□□□□□ -0.57
CLIP4-204ENST00000404424 CCDC113Q9H0I3 377 aa11.47□□□□□ -0.57
CLIP4-204ENST00000404424 KMT5AQ9NQR1 393 aa11.47□□□□□ -0.57
CLIP4-204ENST00000404424 AAASQ9NRG9 546 aa11.47□□□□□ -0.57
CLIP4-204ENST00000404424 GEMIN8Q9NWZ8 242 aaKnown RBP11.47□□□□□ -0.57
CLIP4-204ENST00000404424 DENND3A2RUS2 1198 aa11.46□□□□□ -0.57
CLIP4-204ENST00000404424 CFAP73A6NFT4 308 aa11.46□□□□□ -0.57
CLIP4-204ENST00000404424 TP73O15350 636 aa11.46□□□□□ -0.57
CLIP4-204ENST00000404424 SNX3O60493 162 aa11.46□□□□□ -0.57
CLIP4-204ENST00000404424 TTC4O95801 387 aa11.46□□□□□ -0.57
CLIP4-204ENST00000404424 GARTP22102 1010 aa11.46□□□□□ -0.57
CLIP4-204ENST00000404424 IVDP26440 423 aa11.46□□□□□ -0.57
CLIP4-204ENST00000404424 SLC8A1P32418 973 aa11.46□□□□□ -0.57
CLIP4-204ENST00000404424 ABCD1P33897 745 aa11.46□□□□□ -0.57
CLIP4-204ENST00000404424 BPIFB4P59827 614 aa11.46□□□□□ -0.57
CLIP4-204ENST00000404424 MAP3K10Q02779 954 aa11.46□□□□□ -0.57
CLIP4-204ENST00000404424 PGM5Q15124 567 aa11.46□□□□□ -0.57
CLIP4-204ENST00000404424 UGCGQ16739 394 aa11.46□□□□□ -0.57
CLIP4-204ENST00000404424 WLSQ5T9L3 541 aa11.46□□□□□ -0.57
CLIP4-204ENST00000404424 OTUD6AQ7L8S5 288 aa11.46□□□□□ -0.57
CLIP4-204ENST00000404424 BBOF1Q8ND07 529 aa11.46□□□□□ -0.57
CLIP4-204ENST00000404424 DYDC1Q8WWB3 177 aa11.46□□□□□ -0.57
CLIP4-204ENST00000404424 LPAR1Q92633 364 aa11.46□□□□□ -0.57
CLIP4-204ENST00000404424 GMLQ99445 158 aa11.46□□□□□ -0.57
CLIP4-204ENST00000404424 PLCD4Q9BRC7 762 aa11.46□□□□□ -0.57
CLIP4-204ENST00000404424 SH2D3AQ9BRG2 576 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms