RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 AKAP5P24588 427 aa13.38□□□□□ -0.27
LINC00339-201ENST00000404210 EEF1GP26641 437 aaKnown RBP13.38□□□□□ -0.27
LINC00339-201ENST00000404210 SPAG1Q07617 926 aa13.38□□□□□ -0.27
LINC00339-201ENST00000404210 PSMD6Q15008 389 aa13.38□□□□□ -0.27
LINC00339-201ENST00000404210 ENOX2Q16206 610 aaKnown RBP13.38□□□□□ -0.27
LINC00339-201ENST00000404210 CCDC40Q4G0X9 1142 aa13.38□□□□□ -0.27
LINC00339-201ENST00000404210 CHRDL2Q6WN34 429 aa13.38□□□□□ -0.27
LINC00339-201ENST00000404210 OTOP2Q7RTS6 562 aa13.38□□□□□ -0.27
LINC00339-201ENST00000404210 USP37Q86T82 979 aa13.38□□□□□ -0.27
LINC00339-201ENST00000404210 NT5DC4Q86YG4 428 aa13.38□□□□□ -0.27
LINC00339-201ENST00000404210 NPAS4Q8IUM7 802 aa13.38□□□□□ -0.27
LINC00339-201ENST00000404210 PARD3BQ8TEW8 1205 aa13.38□□□□□ -0.27
LINC00339-201ENST00000404210 RSPH1Q8WYR4 309 aa13.38□□□□□ -0.27
LINC00339-201ENST00000404210 APOL6Q9BWW8 343 aa13.38□□□□□ -0.27
LINC00339-201ENST00000404210 RBSNQ9H1K0 784 aa13.38□□□□□ -0.27
LINC00339-201ENST00000404210 HSD3B7Q9H2F3 369 aa13.38□□□□□ -0.27
LINC00339-201ENST00000404210 RSAD1Q9HA92 442 aa13.38□□□□□ -0.27
LINC00339-201ENST00000404210 RBAKQ9NYW8 714 aaPredicted RBP13.38□□□□□ -0.27
LINC00339-201ENST00000404210 MAGEC2Q9UBF1 373 aaPredicted RBP13.38□□□□□ -0.27
LINC00339-201ENST00000404210 ARMCX3Q9UH62 379 aaPredicted RBP13.38□□□□□ -0.27
LINC00339-201ENST00000404210 LRFN2Q9ULH4 789 aa13.38□□□□□ -0.27
LINC00339-201ENST00000404210 TRIP11Q15643 1979 aa13.38□□□□□ -0.27
LINC00339-201ENST00000404210 KCNJ18B7U540 433 aa13.37□□□□□ -0.27
LINC00339-201ENST00000404210 INPPL1O15357 1258 aa13.37□□□□□ -0.27
LINC00339-201ENST00000404210 HOXA2O43364 376 aa13.37□□□□□ -0.27
LINC00339-201ENST00000404210 OFD1O75665 1012 aa13.37□□□□□ -0.27
LINC00339-201ENST00000404210 RECQL4O94761 1208 aa13.37□□□□□ -0.27
LINC00339-201ENST00000404210 CXCL8P10145 99 aa13.37□□□□□ -0.27
LINC00339-201ENST00000404210 MAGEA10P43363 369 aaPredicted RBP13.37□□□□□ -0.27
LINC00339-201ENST00000404210 KCNJ6P48051 423 aa13.37□□□□□ -0.27
LINC00339-201ENST00000404210 VAMP7P51809 220 aa13.37□□□□□ -0.27
LINC00339-201ENST00000404210 WDR5P61964 334 aaKnown RBP13.37□□□□□ -0.27
LINC00339-201ENST00000404210 CLDN10P78369 228 aa13.37□□□□□ -0.27
LINC00339-201ENST00000404210 PPP2R3AQ06190 1150 aa13.37□□□□□ -0.27
LINC00339-201ENST00000404210 BFSP1Q12934 665 aa13.37□□□□□ -0.27
LINC00339-201ENST00000404210 KCNJ12Q14500 433 aa13.37□□□□□ -0.27
LINC00339-201ENST00000404210 TCP11X2Q5H9J9 407 aa13.37□□□□□ -0.27
LINC00339-201ENST00000404210 CREBRFQ8IUR6 639 aa13.37□□□□□ -0.27
LINC00339-201ENST00000404210 PHOSPHO2Q8TCD6 241 aa13.37□□□□□ -0.27
LINC00339-201ENST00000404210 LPPQ93052 612 aa13.37□□□□□ -0.27
LINC00339-201ENST00000404210 CNOT6LQ96LI5 555 aaKnown RBP13.37□□□□□ -0.27
LINC00339-201ENST00000404210 FNBP1Q96RU3 617 aa13.37□□□□□ -0.27
LINC00339-201ENST00000404210 MTIF3Q9H2K0 278 aaKnown RBP13.37□□□□□ -0.27
LINC00339-201ENST00000404210 CNTN3Q9P232 1028 aa13.37□□□□□ -0.27
LINC00339-201ENST00000404210 PCDH10Q9P2E7 1040 aa13.37□□□□□ -0.27
LINC00339-201ENST00000404210 DERAQ9Y315 318 aa13.37□□□□□ -0.27
LINC00339-201ENST00000404210 ANK1P16157 1881 aa13.36□□□□□ -0.27
LINC00339-201ENST00000404210 MEIS3P2A8K0S8 358 aa13.36□□□□□ -0.27
LINC00339-201ENST00000404210 MEFVO15553 781 aaPredicted RBP13.36□□□□□ -0.27
LINC00339-201ENST00000404210 PRKCSHP14314 528 aaPredicted RBP13.36□□□□□ -0.27
LINC00339-201ENST00000404210 KCNE1P15382 129 aa13.36□□□□□ -0.27
LINC00339-201ENST00000404210 AP3M2P53677 418 aa13.36□□□□□ -0.27
LINC00339-201ENST00000404210 UVSSAQ2YD98 709 aa13.36□□□□□ -0.27
LINC00339-201ENST00000404210 RASIP1Q5U651 963 aa13.36□□□□□ -0.27
LINC00339-201ENST00000404210 TRIM59Q8IWR1 403 aa13.36□□□□□ -0.27
LINC00339-201ENST00000404210 RNF169Q8NCN4 708 aa13.36□□□□□ -0.27
LINC00339-201ENST00000404210 RNF214Q8ND24 703 aa13.36□□□□□ -0.27
LINC00339-201ENST00000404210 ANKRD20A12PQ8NF67 263 aa13.36□□□□□ -0.27
LINC00339-201ENST00000404210 CACTINQ8WUQ7 758 aaKnown RBP13.36□□□□□ -0.27
LINC00339-201ENST00000404210 FAM212AQ96EL1 285 aa13.36□□□□□ -0.27
LINC00339-201ENST00000404210 SNX27Q96L92 541 aa13.36□□□□□ -0.27
LINC00339-201ENST00000404210 GDF15Q99988 308 aa13.36□□□□□ -0.27
LINC00339-201ENST00000404210 PDE11AQ9HCR9 933 aa13.36□□□□□ -0.27
LINC00339-201ENST00000404210 RNF19AQ9NV58 838 aa13.36□□□□□ -0.27
LINC00339-201ENST00000404210 MIOSQ9NXC5 875 aa13.36□□□□□ -0.27
LINC00339-201ENST00000404210 KLK14Q9P0G3 267 aa13.36□□□□□ -0.27
LINC00339-201ENST00000404210 KANSL3Q9P2N6 904 aa13.36□□□□□ -0.27
LINC00339-201ENST00000404210 LIMA1Q9UHB6 759 aaKnown RBP13.36□□□□□ -0.27
LINC00339-201ENST00000404210 C2CD2Q9Y426 696 aa13.36□□□□□ -0.27
LINC00339-201ENST00000404210 SMIM28A0A1B0GU29 152 aa13.35□□□□□ -0.27
LINC00339-201ENST00000404210 ARL5CA6NH57 179 aa13.35□□□□□ -0.27
LINC00339-201ENST00000404210 ZBBXA8MT70 800 aa13.35□□□□□ -0.27
LINC00339-201ENST00000404210 H0YGN5 161 aa13.35□□□□□ -0.27
LINC00339-201ENST00000404210 STX10O60499 249 aa13.35□□□□□ -0.27
LINC00339-201ENST00000404210 IBSPP21815 317 aaPredicted RBP13.35□□□□□ -0.27
LINC00339-201ENST00000404210 GTF2H1P32780 548 aa13.35□□□□□ -0.27
LINC00339-201ENST00000404210 BMP8BP34820 402 aa13.35□□□□□ -0.27
LINC00339-201ENST00000404210 MTIF2P46199 727 aaKnown RBP13.35□□□□□ -0.27
LINC00339-201ENST00000404210 WNT7BP56706 349 aa13.35□□□□□ -0.27
LINC00339-201ENST00000404210 DEFB103AP81534 67 aa13.35□□□□□ -0.27
LINC00339-201ENST00000404210 ZBTB6Q15916 424 aa13.35□□□□□ -0.27
LINC00339-201ENST00000404210 HSP90AA4PQ58FG1 418 aa13.35□□□□□ -0.27
LINC00339-201ENST00000404210 GLB1LQ6UWU2 654 aa13.35□□□□□ -0.27
LINC00339-201ENST00000404210 WDR49Q8IV35 697 aa13.35□□□□□ -0.27
LINC00339-201ENST00000404210 GSTCDQ8NEC7 633 aa13.35□□□□□ -0.27
LINC00339-201ENST00000404210 PLEKHO2Q8TD55 490 aa13.35□□□□□ -0.27
LINC00339-201ENST00000404210 CCDC127Q96BQ5 260 aa13.35□□□□□ -0.27
LINC00339-201ENST00000404210 CASD1Q96PB1 797 aa13.35□□□□□ -0.27
LINC00339-201ENST00000404210 RPS6KC1Q96S38 1066 aa13.35□□□□□ -0.27
LINC00339-201ENST00000404210 GAD1Q99259 594 aa13.35□□□□□ -0.27
LINC00339-201ENST00000404210 CGRRF1Q99675 332 aa13.35□□□□□ -0.27
LINC00339-201ENST00000404210 TUBGCP2Q9BSJ2 902 aa13.35□□□□□ -0.27
LINC00339-201ENST00000404210 TMEM117Q9H0C3 514 aa13.35□□□□□ -0.27
LINC00339-201ENST00000404210 INTS13Q9NVM9 706 aa13.35□□□□□ -0.27
LINC00339-201ENST00000404210 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.35□□□□□ -0.27
LINC00339-201ENST00000404210 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.35□□□□□ -0.27
LINC00339-201ENST00000404210 SLC4A7Q9Y6M7 1214 aa13.35□□□□□ -0.27
LINC00339-201ENST00000404210 RALGAPA2Q2PPJ7 1873 aa13.34□□□□□ -0.27
LINC00339-201ENST00000404210 LRRIQ3A6PVS8 624 aaPredicted RBP13.34□□□□□ -0.27
LINC00339-201ENST00000404210 PMM2O15305 246 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms