RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 SEC14L1Q92503 715 aa16.9■□□□□ 0.3
CDC42-203ENST00000400259 FHDC1Q9C0D6 1143 aaPredicted RBP16.9■□□□□ 0.3
CDC42-203ENST00000400259 RBPJLQ9UBG7 517 aa16.9■□□□□ 0.3
CDC42-203ENST00000400259 PLXNA1Q9UIW2 1896 aa16.9■□□□□ 0.3
CDC42-203ENST00000400259 ZSWIM8A7E2V4 1837 aa16.9■□□□□ 0.3
CDC42-203ENST00000400259 LOC102724159A0A0B4J2E5 919 aa16.9■□□□□ 0.3
CDC42-203ENST00000400259 HLA-DRAP01903 254 aa16.9■□□□□ 0.3
CDC42-203ENST00000400259 FGGP02679 453 aa16.9■□□□□ 0.3
CDC42-203ENST00000400259 ITGA4P13612 1032 aa16.9■□□□□ 0.3
CDC42-203ENST00000400259 WNT7BP56706 349 aa16.9■□□□□ 0.3
CDC42-203ENST00000400259 POU5F1Q01860 360 aaKnown RBP16.9■□□□□ 0.3
CDC42-203ENST00000400259 PWP2Q15269 919 aaKnown RBP16.9■□□□□ 0.3
CDC42-203ENST00000400259 TDRD10Q5VZ19 366 aaKnown RBP16.9■□□□□ 0.3
CDC42-203ENST00000400259 ACAD10Q6JQN1 1059 aa16.9■□□□□ 0.3
CDC42-203ENST00000400259 USP50Q70EL3 339 aaPredicted RBP16.9■□□□□ 0.3
CDC42-203ENST00000400259 MAATS1Q7Z4T9 603 aa16.9■□□□□ 0.3
CDC42-203ENST00000400259 IFT81Q8WYA0 676 aa16.9■□□□□ 0.3
CDC42-203ENST00000400259 ALG3Q92685 438 aa16.9■□□□□ 0.3
CDC42-203ENST00000400259 L3MBTL3Q96JM7 780 aaPredicted RBP16.9■□□□□ 0.3
CDC42-203ENST00000400259 CGRRF1Q99675 332 aa16.9■□□□□ 0.3
CDC42-203ENST00000400259 PI4K2AQ9BTU6 479 aa16.9■□□□□ 0.3
CDC42-203ENST00000400259 TARS2Q9BW92 718 aaKnown RBP16.9■□□□□ 0.3
CDC42-203ENST00000400259 DDX47Q9H0S4 455 aaKnown RBP16.9■□□□□ 0.3
CDC42-203ENST00000400259 TXNRD2Q9NNW7 524 aa16.9■□□□□ 0.3
CDC42-203ENST00000400259 EDN1P05305 212 aa16.89■□□□□ 0.29
CDC42-203ENST00000400259 FAM153BP0C7A2 387 aa16.89■□□□□ 0.29
CDC42-203ENST00000400259 TNNI1P19237 187 aa16.89■□□□□ 0.29
CDC42-203ENST00000400259 ACOT2P49753 483 aa16.89■□□□□ 0.29
CDC42-203ENST00000400259 EFNA5P52803 228 aa16.89■□□□□ 0.29
CDC42-203ENST00000400259 LY6KQ17RY6 165 aa16.89■□□□□ 0.29
CDC42-203ENST00000400259 CLEC16AQ2KHT3 1053 aa16.89■□□□□ 0.29
CDC42-203ENST00000400259 FAM153CQ494X1 144 aa16.89■□□□□ 0.29
CDC42-203ENST00000400259 WDR44Q5JSH3 913 aa16.89■□□□□ 0.29
CDC42-203ENST00000400259 EXOC8Q8IYI6 725 aa16.89■□□□□ 0.29
CDC42-203ENST00000400259 UBL4BQ8N7F7 174 aa16.89■□□□□ 0.29
CDC42-203ENST00000400259 CCDC26Q8TAB7 109 aa16.89■□□□□ 0.29
CDC42-203ENST00000400259 UPF1Q92900 1129 aaKnown RBP eCLIP16.89■□□□□ 0.292e-12■■■■■ 27.7
CDC42-203ENST00000400259 CD101Q93033 1021 aa16.89■□□□□ 0.29
CDC42-203ENST00000400259 ZBTB45Q96K62 511 aaPredicted RBP16.89■□□□□ 0.29
CDC42-203ENST00000400259 GPR20Q99678 358 aa16.89■□□□□ 0.29
CDC42-203ENST00000400259 ZSWIM1Q9BR11 485 aa16.89■□□□□ 0.29
CDC42-203ENST00000400259 MSTO1Q9BUK6 570 aa16.89■□□□□ 0.29
CDC42-203ENST00000400259 R3HDMLQ9H3Y0 253 aa16.89■□□□□ 0.29
CDC42-203ENST00000400259 PLEKHA4Q9H4M7 779 aa16.89■□□□□ 0.29
CDC42-203ENST00000400259 RBAKQ9NYW8 714 aaPredicted RBP16.89■□□□□ 0.29
CDC42-203ENST00000400259 FAM153AQ9UHL3 310 aa16.89■□□□□ 0.29
CDC42-203ENST00000400259 PTPRJQ12913 1337 aa16.89■□□□□ 0.29
CDC42-203ENST00000400259 ANK1P16157 1881 aa16.89■□□□□ 0.29
CDC42-203ENST00000400259 ARIH2O95376 493 aa16.89■□□□□ 0.29
CDC42-203ENST00000400259 VNN1O95497 513 aa16.89■□□□□ 0.29
CDC42-203ENST00000400259 ECHS1P30084 290 aa16.89■□□□□ 0.29
CDC42-203ENST00000400259 HNRNPH2P55795 449 aaKnown RBP16.89■□□□□ 0.29
CDC42-203ENST00000400259 BPIFB4P59827 614 aa16.89■□□□□ 0.29
CDC42-203ENST00000400259 PTENP60484 403 aa16.89■□□□□ 0.29
CDC42-203ENST00000400259 CELF3Q5SZQ8 465 aaKnown RBP16.89■□□□□ 0.29
CDC42-203ENST00000400259 IER5Q5VY09 327 aa16.89■□□□□ 0.29
CDC42-203ENST00000400259 CDCA2Q69YH5 1023 aaPredicted RBP16.89■□□□□ 0.29
CDC42-203ENST00000400259 PAXIP1Q6ZW49 1069 aaPredicted RBP16.89■□□□□ 0.29
CDC42-203ENST00000400259 FASTKD5Q7L8L6 764 aaKnown RBP16.89■□□□□ 0.29
CDC42-203ENST00000400259 PLPPR4Q7Z2D5 763 aa16.89■□□□□ 0.29
CDC42-203ENST00000400259 CCDC113Q9H0I3 377 aa16.89■□□□□ 0.29
CDC42-203ENST00000400259 WNT8AQ9H1J5 351 aa16.89■□□□□ 0.29
CDC42-203ENST00000400259 AZI2Q9H6S1 392 aa16.89■□□□□ 0.29
CDC42-203ENST00000400259 FAM204AQ9H8W3 233 aa16.89■□□□□ 0.29
CDC42-203ENST00000400259 PCDHB2Q9Y5E7 798 aa16.89■□□□□ 0.29
CDC42-203ENST00000400259 CNTNAP2Q9UHC6 1331 aa16.89■□□□□ 0.29
CDC42-203ENST00000400259 IGKV6-21A0A0C4DH24 114 aa16.88■□□□□ 0.29
CDC42-203ENST00000400259 OPA1O60313 960 aa16.88■□□□□ 0.29
CDC42-203ENST00000400259 HSF2BPO75031 334 aa16.88■□□□□ 0.29
CDC42-203ENST00000400259 HSPA6P17066 643 aa16.88■□□□□ 0.29
CDC42-203ENST00000400259 OSBPP22059 807 aa16.88■□□□□ 0.29
CDC42-203ENST00000400259 PIK3CAP42336 1068 aa16.88■□□□□ 0.29
CDC42-203ENST00000400259 LMAN1P49257 510 aa16.88■□□□□ 0.29
CDC42-203ENST00000400259 IQCKQ8N0W5 287 aa16.88■□□□□ 0.29
CDC42-203ENST00000400259 ZNF564Q8TBZ8 553 aaPredicted RBP16.88■□□□□ 0.29
CDC42-203ENST00000400259 TCP11Q8WWU5 503 aa16.88■□□□□ 0.29
CDC42-203ENST00000400259 NUP85Q9BW27 656 aa16.88■□□□□ 0.29
CDC42-203ENST00000400259 TRPC6Q9Y210 931 aa16.88■□□□□ 0.29
CDC42-203ENST00000400259 SCN4AP35499 1836 aa16.88■□□□□ 0.29
CDC42-203ENST00000400259 FAM170AA1A519 330 aa16.87■□□□□ 0.29
CDC42-203ENST00000400259 UNGP13051 313 aaPredicted RBP16.87■□□□□ 0.29
CDC42-203ENST00000400259 KRT5P13647 590 aa16.87■□□□□ 0.29
CDC42-203ENST00000400259 COMTP21964 271 aa16.87■□□□□ 0.29
CDC42-203ENST00000400259 CTNNA2P26232 953 aa16.87■□□□□ 0.29
CDC42-203ENST00000400259 PEX5P50542 639 aa16.87■□□□□ 0.29
CDC42-203ENST00000400259 GRM1Q13255 1194 aa16.87■□□□□ 0.29
CDC42-203ENST00000400259 TRADDQ15628 312 aa16.87■□□□□ 0.29
CDC42-203ENST00000400259 MOB2Q70IA6 237 aa16.87■□□□□ 0.29
CDC42-203ENST00000400259 ZNF653Q96CK0 615 aa16.87■□□□□ 0.29
CDC42-203ENST00000400259 MMP19Q99542 508 aa16.87■□□□□ 0.29
CDC42-203ENST00000400259 MROH8Q9H579 483 aa16.87■□□□□ 0.29
CDC42-203ENST00000400259 GOLGA6L10A0A0M3HER8 536 aa16.87■□□□□ 0.29
CDC42-203ENST00000400259 ZBTB42B2RXF5 422 aa16.87■□□□□ 0.29
CDC42-203ENST00000400259 GOLGA8KD6RF30 607 aa16.87■□□□□ 0.29
CDC42-203ENST00000400259 HSPA9P38646 679 aaKnown RBP16.87■□□□□ 0.29
CDC42-203ENST00000400259 KCTD2Q14681 263 aa16.87■□□□□ 0.29
CDC42-203ENST00000400259 KCTD19Q17RG1 926 aaPredicted RBP16.87■□□□□ 0.29
CDC42-203ENST00000400259 Q3C1V9 767 aa16.87■□□□□ 0.29
CDC42-203ENST00000400259 ZBTB41Q5SVQ8 909 aa16.87■□□□□ 0.29
CDC42-203ENST00000400259 LMBRD2Q68DH5 695 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms