RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 NAALADL1Q9UQQ1 740 aa11.82□□□□□ -0.52
CSGALNACT1-202ENST00000397998 NEU2Q9Y3R4 380 aa11.82□□□□□ -0.52
CSGALNACT1-202ENST00000397998 DISP2A7MBM2 1401 aa11.82□□□□□ -0.52
CSGALNACT1-202ENST00000397998 FOXO6A8MYZ6 492 aa11.81□□□□□ -0.52
CSGALNACT1-202ENST00000397998 NUDT17P0C025 328 aa11.81□□□□□ -0.52
CSGALNACT1-202ENST00000397998 MMP13P45452 471 aa11.81□□□□□ -0.52
CSGALNACT1-202ENST00000397998 ARFIP2P53365 341 aa11.81□□□□□ -0.52
CSGALNACT1-202ENST00000397998 OVGP1Q12889 678 aa11.81□□□□□ -0.52
CSGALNACT1-202ENST00000397998 ALCAMQ13740 583 aa11.81□□□□□ -0.52
CSGALNACT1-202ENST00000397998 EXOC3L1Q86VI1 746 aa11.81□□□□□ -0.52
CSGALNACT1-202ENST00000397998 ERICH1Q86X53 443 aa11.81□□□□□ -0.52
CSGALNACT1-202ENST00000397998 PDIK1LQ8N165 341 aa11.81□□□□□ -0.52
CSGALNACT1-202ENST00000397998 SLC5A5Q92911 643 aa11.81□□□□□ -0.52
CSGALNACT1-202ENST00000397998 POLR3CQ9BUI4 534 aaPredicted RBP11.81□□□□□ -0.52
CSGALNACT1-202ENST00000397998 CALN1Q9BXU9 219 aa11.81□□□□□ -0.52
CSGALNACT1-202ENST00000397998 ZWILCHQ9H900 591 aa11.81□□□□□ -0.52
CSGALNACT1-202ENST00000397998 RXFP1Q9HBX9 757 aa11.81□□□□□ -0.52
CSGALNACT1-202ENST00000397998 A1CFQ9NQ94 594 aaKnown RBP11.81□□□□□ -0.52
CSGALNACT1-202ENST00000397998 PPARGC1AQ9UBK2 798 aaKnown RBP11.81□□□□□ -0.52
CSGALNACT1-202ENST00000397998 PHTF1Q9UMS5 762 aa11.81□□□□□ -0.52
CSGALNACT1-202ENST00000397998 MAD1L1Q9Y6D9 718 aa11.81□□□□□ -0.52
CSGALNACT1-202ENST00000397998 C5P01031 1676 aa11.81□□□□□ -0.52
CSGALNACT1-202ENST00000397998 ASTN1O14525 1302 aa11.81□□□□□ -0.52
CSGALNACT1-202ENST00000397998 STAM2O75886 525 aa11.81□□□□□ -0.52
CSGALNACT1-202ENST00000397998 TJP3O95049 919 aa11.81□□□□□ -0.52
CSGALNACT1-202ENST00000397998 KLC1Q07866 573 aa11.81□□□□□ -0.52
CSGALNACT1-202ENST00000397998 HADHQ16836 314 aaKnown RBP11.81□□□□□ -0.52
CSGALNACT1-202ENST00000397998 ARHGEF16Q5VV41 709 aa11.81□□□□□ -0.52
CSGALNACT1-202ENST00000397998 ARHGEF19Q8IW93 802 aa11.81□□□□□ -0.52
CSGALNACT1-202ENST00000397998 NAF1Q96HR8 494 aaKnown RBP11.81□□□□□ -0.52
CSGALNACT1-202ENST00000397998 FAM161BQ96MY7 647 aa11.81□□□□□ -0.52
CSGALNACT1-202ENST00000397998 TTC1Q99614 292 aa11.81□□□□□ -0.52
CSGALNACT1-202ENST00000397998 H7C0C1 242 aa11.81□□□□□ -0.52
CSGALNACT1-202ENST00000397998 P4HBP07237 508 aaKnown RBP11.81□□□□□ -0.52
CSGALNACT1-202ENST00000397998 ATP5OP48047 213 aa11.81□□□□□ -0.52
CSGALNACT1-202ENST00000397998 TMEM154Q6P9G4 183 aa11.81□□□□□ -0.52
CSGALNACT1-202ENST00000397998 SDCCAG8Q86SQ7 713 aaPredicted RBP11.81□□□□□ -0.52
CSGALNACT1-202ENST00000397998 PALB2Q86YC2 1186 aa11.81□□□□□ -0.52
CSGALNACT1-202ENST00000397998 RFX6Q8HWS3 928 aa11.81□□□□□ -0.52
CSGALNACT1-202ENST00000397998 RASGEF1CQ8N431 466 aa11.81□□□□□ -0.52
CSGALNACT1-202ENST00000397998 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.81□□□□□ -0.52
CSGALNACT1-202ENST00000397998 PWWP2AQ96N64 755 aa11.81□□□□□ -0.52
CSGALNACT1-202ENST00000397998 DLGAP2Q9P1A6 1054 aa11.81□□□□□ -0.52
CSGALNACT1-202ENST00000397998 SEPT9Q9UHD8 586 aaPredicted RBP11.81□□□□□ -0.52
CSGALNACT1-202ENST00000397998 IGSF9BQ9UPX0 1349 aa11.81□□□□□ -0.52
CSGALNACT1-202ENST00000397998 TISP43B9A030 160 aa11.8□□□□□ -0.52
CSGALNACT1-202ENST00000397998 SLC8A3P57103 927 aa11.8□□□□□ -0.52
CSGALNACT1-202ENST00000397998 SYCP2LQ5T4T6 812 aa11.8□□□□□ -0.52
CSGALNACT1-202ENST00000397998 WDR78Q5VTH9 848 aa11.8□□□□□ -0.52
CSGALNACT1-202ENST00000397998 PRR5LQ6MZQ0 368 aa11.8□□□□□ -0.52
CSGALNACT1-202ENST00000397998 SCYL2Q6P3W7 929 aa11.8□□□□□ -0.52
CSGALNACT1-202ENST00000397998 HIPK4Q8NE63 616 aa11.8□□□□□ -0.52
CSGALNACT1-202ENST00000397998 DNAJC9Q8WXX5 260 aa11.8□□□□□ -0.52
CSGALNACT1-202ENST00000397998 DNAJC18Q9H819 358 aa11.8□□□□□ -0.52
CSGALNACT1-202ENST00000397998 OLFML3Q9NRN5 406 aa11.8□□□□□ -0.52
CSGALNACT1-202ENST00000397998 PRR12Q9ULL5 1215 aa11.8□□□□□ -0.52
CSGALNACT1-202ENST00000397998 KRT16P08779 473 aa11.8□□□□□ -0.52
CSGALNACT1-202ENST00000397998 KITP10721 976 aa11.8□□□□□ -0.52
CSGALNACT1-202ENST00000397998 QARSP47897 775 aaKnown RBP11.8□□□□□ -0.52
CSGALNACT1-202ENST00000397998 MARSP56192 900 aaKnown RBP11.8□□□□□ -0.52
CSGALNACT1-202ENST00000397998 SNRNP35Q16560 246 aaKnown RBP11.8□□□□□ -0.52
CSGALNACT1-202ENST00000397998 ANKRD20A2Q5SQ80 823 aa11.8□□□□□ -0.52
CSGALNACT1-202ENST00000397998 ANKRD20A1Q5TYW2 823 aa11.8□□□□□ -0.52
CSGALNACT1-202ENST00000397998 LVRNQ6Q4G3 990 aa11.8□□□□□ -0.52
CSGALNACT1-202ENST00000397998 DHX38Q92620 1227 aaKnown RBP11.8□□□□□ -0.52
CSGALNACT1-202ENST00000397998 TTC25Q96NG3 672 aa11.8□□□□□ -0.52
CSGALNACT1-202ENST00000397998 PAGR1Q9BTK6 254 aa11.8□□□□□ -0.52
CSGALNACT1-202ENST00000397998 DDX4Q9NQI0 724 aaKnown RBP11.8□□□□□ -0.52
CSGALNACT1-202ENST00000397998 CHST7Q9NS84 486 aa11.8□□□□□ -0.52
CSGALNACT1-202ENST00000397998 A8MUI8 341 aa11.8□□□□□ -0.52
CSGALNACT1-202ENST00000397998 NDC80O14777 642 aa11.8□□□□□ -0.52
CSGALNACT1-202ENST00000397998 LACTB2Q53H82 288 aaPredicted RBP11.8□□□□□ -0.52
CSGALNACT1-202ENST00000397998 MAGEB18Q96M61 343 aa11.8□□□□□ -0.52
CSGALNACT1-202ENST00000397998 BCAS3Q9H6U6 928 aa11.8□□□□□ -0.52
CSGALNACT1-202ENST00000397998 O00370 1275 aa11.79□□□□□ -0.52
CSGALNACT1-202ENST00000397998 LMNAP02545 664 aaKnown RBP11.79□□□□□ -0.52
CSGALNACT1-202ENST00000397998 ALDH1B1P30837 517 aa11.79□□□□□ -0.52
CSGALNACT1-202ENST00000397998 SERPINB6P35237 376 aa11.79□□□□□ -0.52
CSGALNACT1-202ENST00000397998 CTCFP49711 727 aaPredicted RBP11.79□□□□□ -0.52
CSGALNACT1-202ENST00000397998 GSCP56915 257 aaPredicted RBP11.79□□□□□ -0.52
CSGALNACT1-202ENST00000397998 DLGAP5Q15398 846 aa11.79□□□□□ -0.52
CSGALNACT1-202ENST00000397998 C11orf63Q6NUN7 778 aa11.79□□□□□ -0.52
CSGALNACT1-202ENST00000397998 SLC30A9Q6PML9 568 aa11.79□□□□□ -0.52
CSGALNACT1-202ENST00000397998 CBWD2Q8IUF1 395 aa11.79□□□□□ -0.52
CSGALNACT1-202ENST00000397998 SMC1BQ8NDV3 1235 aa11.79□□□□□ -0.52
CSGALNACT1-202ENST00000397998 KIFC3Q9BVG8 833 aa11.79□□□□□ -0.52
CSGALNACT1-202ENST00000397998 NYAP2Q9P242 653 aa11.79□□□□□ -0.52
CSGALNACT1-202ENST00000397998 PPP1R1BQ9UD71 204 aaPredicted RBP11.79□□□□□ -0.52
CSGALNACT1-202ENST00000397998 AJAP1Q9UKB5 411 aaPredicted RBP11.79□□□□□ -0.52
CSGALNACT1-202ENST00000397998 SLC26A4O43511 780 aa11.79□□□□□ -0.52
CSGALNACT1-202ENST00000397998 DKC1O60832 514 aaKnown RBP eCLIP11.79□□□□□ -0.52
CSGALNACT1-202ENST00000397998 PPP1R11O60927 126 aaPredicted RBP11.79□□□□□ -0.52
CSGALNACT1-202ENST00000397998 ARL4CP56559 192 aa11.79□□□□□ -0.52
CSGALNACT1-202ENST00000397998 RHBDL3P58872 404 aa11.79□□□□□ -0.52
CSGALNACT1-202ENST00000397998 NCALDP61601 193 aa11.79□□□□□ -0.52
CSGALNACT1-202ENST00000397998 TMPRSS15P98073 1019 aa11.79□□□□□ -0.52
CSGALNACT1-202ENST00000397998 MDH1BQ5I0G3 518 aa11.79□□□□□ -0.52
CSGALNACT1-202ENST00000397998 C6orf89Q6UWU4 347 aa11.79□□□□□ -0.52
CSGALNACT1-202ENST00000397998 ATXN2LQ8WWM7 1075 aaKnown RBP11.79□□□□□ -0.52
CSGALNACT1-202ENST00000397998 SH3GL3Q99963 347 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 579.3 ms