RNA–Protein interactions for RNA: ENST00000397898.7

SUMO3-203, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 3 BASIC

Gene SUMO3, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-203ENST00000397898 CCDC127Q96BQ5 260 aa16.5■□□□□ 0.23
SUMO3-203ENST00000397898 FAM212AQ96EL1 285 aa16.5■□□□□ 0.23
SUMO3-203ENST00000397898 PPP1R9BQ96SB3 815 aa16.5■□□□□ 0.23
SUMO3-203ENST00000397898 ELAC1Q9H777 363 aaKnown RBP16.5■□□□□ 0.23
SUMO3-203ENST00000397898 PDE11AQ9HCR9 933 aa16.5■□□□□ 0.23
SUMO3-203ENST00000397898 TMEM161AQ9NX61 479 aa16.5■□□□□ 0.23
SUMO3-203ENST00000397898 TTC26A0AVF1 554 aa16.49■□□□□ 0.23
SUMO3-203ENST00000397898 LACTBL1A8MY62 500 aa16.49■□□□□ 0.23
SUMO3-203ENST00000397898 VAMP7P51809 220 aa16.49■□□□□ 0.23
SUMO3-203ENST00000397898 PPP2R3AQ06190 1150 aa16.49■□□□□ 0.23
SUMO3-203ENST00000397898 SPAG1Q07617 926 aa16.49■□□□□ 0.23
SUMO3-203ENST00000397898 PSMD6Q15008 389 aa16.49■□□□□ 0.23
SUMO3-203ENST00000397898 TMEM240Q5SV17 173 aa16.49■□□□□ 0.23
SUMO3-203ENST00000397898 PLEKHO2Q8TD55 490 aa16.49■□□□□ 0.23
SUMO3-203ENST00000397898 PARD3BQ8TEW8 1205 aa16.49■□□□□ 0.23
SUMO3-203ENST00000397898 SNX27Q96L92 541 aa16.49■□□□□ 0.23
SUMO3-203ENST00000397898 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.49■□□□□ 0.235e-8■□□□□ 8.8
SUMO3-203ENST00000397898 KLK14Q9P0G3 267 aa16.49■□□□□ 0.23
SUMO3-203ENST00000397898 GIT1Q9Y2X7 761 aa16.49■□□□□ 0.23
SUMO3-203ENST00000397898 PCDHB7Q9Y5E2 793 aa16.49■□□□□ 0.23
SUMO3-203ENST00000397898 IL18RAPO95256 599 aa16.49■□□□□ 0.23
SUMO3-203ENST00000397898 DLATP10515 647 aaKnown RBP16.49■□□□□ 0.23
SUMO3-203ENST00000397898 MTIF2P46199 727 aaKnown RBP16.49■□□□□ 0.23
SUMO3-203ENST00000397898 RGS19P49795 217 aa16.49■□□□□ 0.23
SUMO3-203ENST00000397898 WDR5P61964 334 aaKnown RBP16.49■□□□□ 0.23
SUMO3-203ENST00000397898 DLG4P78352 724 aa16.49■□□□□ 0.23
SUMO3-203ENST00000397898 ALKAL1Q6UXT8 129 aa16.49■□□□□ 0.23
SUMO3-203ENST00000397898 TRIM59Q8IWR1 403 aa16.49■□□□□ 0.23
SUMO3-203ENST00000397898 CRIPAKQ8N1N5 446 aa16.49■□□□□ 0.23
SUMO3-203ENST00000397898 TMC2Q8TDI7 906 aa16.49■□□□□ 0.23
SUMO3-203ENST00000397898 PDLIM2Q96JY6 352 aa16.49■□□□□ 0.23
SUMO3-203ENST00000397898 FNBP1Q96RU3 617 aa16.49■□□□□ 0.23
SUMO3-203ENST00000397898 TUBGCP2Q9BSJ2 902 aa16.49■□□□□ 0.23
SUMO3-203ENST00000397898 CXCL16Q9H2A7 254 aa16.49■□□□□ 0.23
SUMO3-203ENST00000397898 ASB7Q9H672 318 aa16.49■□□□□ 0.23
SUMO3-203ENST00000397898 RSAD1Q9HA92 442 aa16.49■□□□□ 0.23
SUMO3-203ENST00000397898 PLEKHA5Q9HAU0 1116 aa16.49■□□□□ 0.23
SUMO3-203ENST00000397898 UBN1Q9NPG3 1134 aa16.49■□□□□ 0.23
SUMO3-203ENST00000397898 MICAL3Q7RTP6 2002 aa16.48■□□□□ 0.23
SUMO3-203ENST00000397898 TNRC18O15417 2968 aaPredicted RBP16.48■□□□□ 0.23
SUMO3-203ENST00000397898 CAPN15O75808 1086 aa16.48■□□□□ 0.23
SUMO3-203ENST00000397898 AMHP03971 560 aa16.48■□□□□ 0.23
SUMO3-203ENST00000397898 MLH1P40692 756 aa16.48■□□□□ 0.23
SUMO3-203ENST00000397898 MAGEA10P43363 369 aaPredicted RBP16.48■□□□□ 0.23
SUMO3-203ENST00000397898 MCCD1P59942 119 aaPredicted RBP16.48■□□□□ 0.23
SUMO3-203ENST00000397898 KRT31Q15323 416 aa16.48■□□□□ 0.23
SUMO3-203ENST00000397898 SURF1Q15526 300 aa16.48■□□□□ 0.23
SUMO3-203ENST00000397898 DCAF17Q5H9S7 520 aaPredicted RBP16.48■□□□□ 0.23
SUMO3-203ENST00000397898 USP37Q86T82 979 aa16.48■□□□□ 0.23
SUMO3-203ENST00000397898 CD302Q8IX05 232 aa16.48■□□□□ 0.23
SUMO3-203ENST00000397898 ANKRD20A12PQ8NF67 263 aa16.48■□□□□ 0.23
SUMO3-203ENST00000397898 ZFP42Q96MM3 310 aa16.48■□□□□ 0.23
SUMO3-203ENST00000397898 GAD1Q99259 594 aa16.48■□□□□ 0.23
SUMO3-203ENST00000397898 POP1Q99575 1024 aaKnown RBP16.48■□□□□ 0.23
SUMO3-203ENST00000397898 RNF216Q9NWF9 866 aaPredicted RBP16.48■□□□□ 0.23
SUMO3-203ENST00000397898 CNTN3Q9P232 1028 aa16.48■□□□□ 0.23
SUMO3-203ENST00000397898 LRFN2Q9ULH4 789 aa16.48■□□□□ 0.23
SUMO3-203ENST00000397898 ARL5CA6NH57 179 aa16.47■□□□□ 0.23
SUMO3-203ENST00000397898 LRRIQ3A6PVS8 624 aaPredicted RBP16.47■□□□□ 0.23
SUMO3-203ENST00000397898 ZBBXA8MT70 800 aa16.47■□□□□ 0.23
SUMO3-203ENST00000397898 TRIM49P0CI25 452 aa16.47■□□□□ 0.23
SUMO3-203ENST00000397898 TRIM49CP0CI26 452 aa16.47■□□□□ 0.23
SUMO3-203ENST00000397898 FGFR1P11362 822 aa16.47■□□□□ 0.23
SUMO3-203ENST00000397898 PRKCSHP14314 528 aaPredicted RBP16.47■□□□□ 0.23
SUMO3-203ENST00000397898 KCNJ6P48051 423 aa16.47■□□□□ 0.23
SUMO3-203ENST00000397898 DEFB103AP81534 67 aa16.47■□□□□ 0.23
SUMO3-203ENST00000397898 ENPEPQ07075 957 aa16.47■□□□□ 0.23
SUMO3-203ENST00000397898 XKR4Q5GH76 650 aa16.47■□□□□ 0.23
SUMO3-203ENST00000397898 TCERG1LQ5VWI1 586 aa16.47■□□□□ 0.23
SUMO3-203ENST00000397898 NPAS4Q8IUM7 802 aa16.47■□□□□ 0.23
SUMO3-203ENST00000397898 SLC35C1Q96A29 364 aa16.47■□□□□ 0.23
SUMO3-203ENST00000397898 LIMA1Q9UHB6 759 aaKnown RBP16.47■□□□□ 0.23
SUMO3-203ENST00000397898 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.47■□□□□ 0.23
SUMO3-203ENST00000397898 UPP2O95045 317 aa16.46■□□□□ 0.23
SUMO3-203ENST00000397898 TNNI1P19237 187 aa16.46■□□□□ 0.23
SUMO3-203ENST00000397898 AFF1P51825 1210 aaKnown RBP16.46■□□□□ 0.23
SUMO3-203ENST00000397898 CLDN10P78369 228 aa16.46■□□□□ 0.23
SUMO3-203ENST00000397898 GLRA4Q5JXX5 417 aa16.46■□□□□ 0.23
SUMO3-203ENST00000397898 CLLU1OSQ5K130 101 aa16.46■□□□□ 0.23
SUMO3-203ENST00000397898 C1orf220Q5T0J3 134 aa16.46■□□□□ 0.23
SUMO3-203ENST00000397898 JADE1Q6IE81 842 aa16.46■□□□□ 0.23
SUMO3-203ENST00000397898 GSTCDQ8NEC7 633 aa16.46■□□□□ 0.23
SUMO3-203ENST00000397898 HERVK_113Q902F9 699 aa16.46■□□□□ 0.23
SUMO3-203ENST00000397898 TOP1MTQ969P6 601 aa16.46■□□□□ 0.23
SUMO3-203ENST00000397898 ZMAT2Q96NC0 199 aaKnown RBP16.46■□□□□ 0.23
SUMO3-203ENST00000397898 CGRRF1Q99675 332 aa16.46■□□□□ 0.23
SUMO3-203ENST00000397898 RNF19AQ9NV58 838 aa16.46■□□□□ 0.23
SUMO3-203ENST00000397898 TAB2Q9NYJ8 693 aa16.46■□□□□ 0.23
SUMO3-203ENST00000397898 TTC3P53804 2025 aa16.46■□□□□ 0.23
SUMO3-203ENST00000397898 PTPRJQ12913 1337 aa16.46■□□□□ 0.23
SUMO3-203ENST00000397898 SMIM28A0A1B0GU29 152 aa16.46■□□□□ 0.22
SUMO3-203ENST00000397898 LRRC10BA6NIK2 292 aa16.46■□□□□ 0.22
SUMO3-203ENST00000397898 PTGESO14684 152 aa16.46■□□□□ 0.22
SUMO3-203ENST00000397898 OFD1O75665 1012 aa16.46■□□□□ 0.22
SUMO3-203ENST00000397898 NFICP08651 508 aa16.46■□□□□ 0.22
SUMO3-203ENST00000397898 KCNE1P15382 129 aa16.46■□□□□ 0.22
SUMO3-203ENST00000397898 MAN2A1Q16706 1144 aa16.46■□□□□ 0.22
SUMO3-203ENST00000397898 LMBRD2Q68DH5 695 aaPredicted RBP16.46■□□□□ 0.22
SUMO3-203ENST00000397898 GLB1LQ6UWU2 654 aa16.46■□□□□ 0.22
SUMO3-203ENST00000397898 APTXQ7Z2E3 356 aaKnown RBP16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms