RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 PTGISQ16647 500 aa16.39■□□□□ 0.21
LSS-202ENST00000397728 MPZL3Q6UWV2 235 aa16.39■□□□□ 0.21
LSS-202ENST00000397728 C18orf8Q96DM3 657 aa16.39■□□□□ 0.21
LSS-202ENST00000397728 AKAP12Q02952 1782 aa16.38■□□□□ 0.21
LSS-202ENST00000397728 CAPN15O75808 1086 aa16.38■□□□□ 0.21
LSS-202ENST00000397728 HMBSP08397 361 aa16.38■□□□□ 0.21
LSS-202ENST00000397728 FGFR4P22455 802 aa16.38■□□□□ 0.21
LSS-202ENST00000397728 AMHR2Q16671 573 aa16.38■□□□□ 0.21
LSS-202ENST00000397728 TMEM8AQ9HCN3 771 aa16.38■□□□□ 0.21
LSS-202ENST00000397728 UBN1Q9NPG3 1134 aa16.38■□□□□ 0.21
LSS-202ENST00000397728 PFDN4Q9NQP4 134 aa16.38■□□□□ 0.21
LSS-202ENST00000397728 LGALS2P05162 132 aa16.38■□□□□ 0.21
LSS-202ENST00000397728 SCP2P22307 547 aa16.38■□□□□ 0.21
LSS-202ENST00000397728 GNL1P36915 607 aaPredicted RBP16.38■□□□□ 0.21
LSS-202ENST00000397728 RARRES1P49788 294 aa16.38■□□□□ 0.21
LSS-202ENST00000397728 OTOP1Q7RTM1 612 aa16.38■□□□□ 0.21
LSS-202ENST00000397728 SLC51AQ86UW1 340 aa16.38■□□□□ 0.21
LSS-202ENST00000397728 CBWD2Q8IUF1 395 aa16.38■□□□□ 0.21
LSS-202ENST00000397728 FBXL16Q8N461 479 aa16.38■□□□□ 0.21
LSS-202ENST00000397728 ABI2Q9NYB9 513 aaPredicted RBP16.38■□□□□ 0.21
LSS-202ENST00000397728 TJP2Q9UDY2 1190 aa16.38■□□□□ 0.21
LSS-202ENST00000397728 HEXIM1O94992 359 aaKnown RBP16.38■□□□□ 0.21
LSS-202ENST00000397728 ZNF280AP59817 542 aaPredicted RBP16.38■□□□□ 0.21
LSS-202ENST00000397728 SNRPFP62306 86 aaKnown RBP16.38■□□□□ 0.21
LSS-202ENST00000397728 GIT2Q14161 759 aa16.38■□□□□ 0.21
LSS-202ENST00000397728 ERCC6LQ2NKX8 1250 aa16.38■□□□□ 0.21
LSS-202ENST00000397728 GJC2Q5T442 439 aaPredicted RBP16.38■□□□□ 0.21
LSS-202ENST00000397728 RUNDC3BQ96NL0 473 aa16.38■□□□□ 0.21
LSS-202ENST00000397728 MKNK1Q9BUB5 465 aa16.38■□□□□ 0.21
LSS-202ENST00000397728 TRIM62Q9BVG3 475 aa16.38■□□□□ 0.21
LSS-202ENST00000397728 NIF3L1Q9GZT8 377 aa16.38■□□□□ 0.21
LSS-202ENST00000397728 DPP3Q9NY33 737 aa16.38■□□□□ 0.21
LSS-202ENST00000397728 KLHL8Q9P2G9 620 aaPredicted RBP16.38■□□□□ 0.21
LSS-202ENST00000397728 FZD9O00144 591 aa16.37■□□□□ 0.21
LSS-202ENST00000397728 RGS16O15492 202 aaPredicted RBP16.37■□□□□ 0.21
LSS-202ENST00000397728 CAPN2P17655 700 aa16.37■□□□□ 0.21
LSS-202ENST00000397728 SLC9A1P19634 815 aa16.37■□□□□ 0.21
LSS-202ENST00000397728 NIPA1Q7RTP0 329 aa16.37■□□□□ 0.21
LSS-202ENST00000397728 PBKQ96KB5 322 aa16.37■□□□□ 0.21
LSS-202ENST00000397728 CBWD1Q9BRT8 395 aa16.37■□□□□ 0.21
LSS-202ENST00000397728 CPP00450 1065 aa16.37■□□□□ 0.21
LSS-202ENST00000397728 ELNP15502 786 aa16.37■□□□□ 0.21
LSS-202ENST00000397728 HSPA6P17066 643 aa16.37■□□□□ 0.21
LSS-202ENST00000397728 PDE1BQ01064 536 aa16.37■□□□□ 0.21
LSS-202ENST00000397728 STILQ15468 1287 aa16.37■□□□□ 0.21
LSS-202ENST00000397728 FAM110CQ1W6H9 321 aa16.37■□□□□ 0.21
LSS-202ENST00000397728 DHX40Q8IX18 779 aaKnown RBP16.37■□□□□ 0.21
LSS-202ENST00000397728 AP1M1Q9BXS5 423 aa16.37■□□□□ 0.21
LSS-202ENST00000397728 NR2E3Q9Y5X4 410 aa16.37■□□□□ 0.21
LSS-202ENST00000397728 A0A1W2PQC6 194 aa16.37■□□□□ 0.21
LSS-202ENST00000397728 PALMO75781 387 aa16.37■□□□□ 0.21
LSS-202ENST00000397728 ZBTB48P10074 688 aaPredicted RBP16.37■□□□□ 0.21
LSS-202ENST00000397728 PNPLA4P41247 253 aa16.37■□□□□ 0.21
LSS-202ENST00000397728 ALDH1A3P47895 512 aa16.37■□□□□ 0.21
LSS-202ENST00000397728 PLTPP55058 493 aa16.37■□□□□ 0.21
LSS-202ENST00000397728 HASPINQ8TF76 798 aa16.37■□□□□ 0.21
LSS-202ENST00000397728 RBM41Q96IZ5 413 aaKnown RBP16.37■□□□□ 0.21
LSS-202ENST00000397728 GOLGA8CPA6NN73 597 aa16.37■□□□□ 0.21
LSS-202ENST00000397728 TJP3O95049 919 aa16.37■□□□□ 0.21
LSS-202ENST00000397728 FGGP02679 453 aa16.37■□□□□ 0.21
LSS-202ENST00000397728 UCHL3P15374 230 aa16.37■□□□□ 0.21
LSS-202ENST00000397728 NFKBIAP25963 317 aa16.37■□□□□ 0.21
LSS-202ENST00000397728 AFAP1L2Q8N4X5 818 aa16.37■□□□□ 0.21
LSS-202ENST00000397728 SLC30A5Q8TAD4 765 aa16.37■□□□□ 0.21
LSS-202ENST00000397728 PARD3BQ8TEW8 1205 aa16.37■□□□□ 0.21
LSS-202ENST00000397728 AGPAT1Q99943 283 aa16.37■□□□□ 0.21
LSS-202ENST00000397728 KRT3P12035 628 aa16.36■□□□□ 0.21
LSS-202ENST00000397728 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.36■□□□□ 0.214e-6■■□□□ 14.1
LSS-202ENST00000397728 SCYL1Q96KG9 808 aa16.36■□□□□ 0.21
LSS-202ENST00000397728 THP07101 528 aa16.36■□□□□ 0.21
LSS-202ENST00000397728 PDXDC1Q6P996 788 aa16.36■□□□□ 0.21
LSS-202ENST00000397728 ANKRD42Q8N9B4 389 aa16.36■□□□□ 0.21
LSS-202ENST00000397728 DEFB118Q96PH6 123 aa16.36■□□□□ 0.21
LSS-202ENST00000397728 STK33Q9BYT3 514 aa16.36■□□□□ 0.21
LSS-202ENST00000397728 HOMER3Q9NSC5 361 aa16.36■□□□□ 0.21
LSS-202ENST00000397728 TMC7Q7Z402 723 aa16.36■□□□□ 0.21
LSS-202ENST00000397728 NDUFAF2Q8N183 169 aa16.36■□□□□ 0.21
LSS-202ENST00000397728 MTMR14Q8NCE2 650 aa16.36■□□□□ 0.21
LSS-202ENST00000397728 SLC5A5Q92911 643 aa16.36■□□□□ 0.21
LSS-202ENST00000397728 TTC1Q99614 292 aa16.36■□□□□ 0.21
LSS-202ENST00000397728 MTMR12Q9C0I1 747 aa16.36■□□□□ 0.21
LSS-202ENST00000397728 PRDM10Q9NQV6 1147 aa16.36■□□□□ 0.21
LSS-202ENST00000397728 LMO7Q8WWI1 1683 aa16.36■□□□□ 0.21
LSS-202ENST00000397728 POC1B-GALNT4F8VUJ3 575 aa16.36■□□□□ 0.21
LSS-202ENST00000397728 SLITRK3O94933 977 aa16.36■□□□□ 0.21
LSS-202ENST00000397728 LIMA1Q9UHB6 759 aaKnown RBP16.36■□□□□ 0.21
LSS-202ENST00000397728 LSM7Q9UK45 103 aaKnown RBP16.36■□□□□ 0.21
LSS-202ENST00000397728 ZNF449Q6P9G9 518 aa16.35■□□□□ 0.21
LSS-202ENST00000397728 CLEC17AQ6ZS10 378 aa16.35■□□□□ 0.21
LSS-202ENST00000397728 PPP4R1Q8TF05 950 aa16.35■□□□□ 0.21
LSS-202ENST00000397728 CPA5Q8WXQ8 436 aa16.35■□□□□ 0.21
LSS-202ENST00000397728 ENTPD7Q9NQZ7 604 aa16.35■□□□□ 0.21
LSS-202ENST00000397728 IP6K2Q9UHH9 426 aa16.35■□□□□ 0.21
LSS-202ENST00000397728 MIF4GDA9UHW6 222 aaKnown RBP16.35■□□□□ 0.21
LSS-202ENST00000397728 SRGAP2O75044 1071 aa16.35■□□□□ 0.21
LSS-202ENST00000397728 DNAJB2P25686 324 aa16.35■□□□□ 0.21
LSS-202ENST00000397728 ANKRD23Q86SG2 305 aa16.35■□□□□ 0.21
LSS-202ENST00000397728 TADA2BQ86TJ2 420 aa16.35■□□□□ 0.21
LSS-202ENST00000397728 MGARPQ8TDB4 240 aa16.35■□□□□ 0.21
LSS-202ENST00000397728 MOSPD1Q9UJG1 213 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms