RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 XPOTO43592 962 aaKnown RBP11.89□□□□□ -0.51
IFT140-202ENST00000397417 GRIN3BO60391 1043 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 TRPA1O75762 1119 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 STK10O94804 968 aaKnown RBP11.89□□□□□ -0.51
IFT140-202ENST00000397417 FDX1P10109 184 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 CXCL8P10145 99 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 ADORA2AP29274 412 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 GGCXP38435 758 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 NNTQ13423 1086 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 LRRC14Q15048 493 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 DAB2IPQ5VWQ8 1189 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 SV2AQ7L0J3 742 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 EMC1Q8N766 993 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 ANKS4BQ8N8V4 417 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 C1orf131Q8NDD1 294 aaKnown RBP11.89□□□□□ -0.51
IFT140-202ENST00000397417 SLC17A8Q8NDX2 589 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 CFAP36Q96G28 342 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 ATXN7L3BQ96GX2 97 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 ANKRD63C9JTQ0 380 aa11.88□□□□□ -0.51
IFT140-202ENST00000397417 NFKBIEO00221 500 aa11.88□□□□□ -0.51
IFT140-202ENST00000397417 CETPP11597 493 aa11.88□□□□□ -0.51
IFT140-202ENST00000397417 MDM2Q00987 491 aaPredicted RBP11.88□□□□□ -0.51
IFT140-202ENST00000397417 PPATQ06203 517 aa11.88□□□□□ -0.51
IFT140-202ENST00000397417 FAM182AQ5T1J6 154 aa11.88□□□□□ -0.51
IFT140-202ENST00000397417 CDKAL1Q5VV42 579 aa11.88□□□□□ -0.51
IFT140-202ENST00000397417 RYBPQ8N488 228 aaPredicted RBP11.88□□□□□ -0.51
IFT140-202ENST00000397417 CEP120Q8N960 986 aa11.88□□□□□ -0.51
IFT140-202ENST00000397417 ZBED2Q9BTP6 218 aa11.88□□□□□ -0.51
IFT140-202ENST00000397417 H3BRB1 525 aa11.88□□□□□ -0.51
IFT140-202ENST00000397417 COMTP21964 271 aa11.88□□□□□ -0.51
IFT140-202ENST00000397417 PLA2G4AP47712 749 aa11.88□□□□□ -0.51
IFT140-202ENST00000397417 LIG3P49916 1009 aa11.88□□□□□ -0.51
IFT140-202ENST00000397417 SNX16P57768 344 aa11.88□□□□□ -0.51
IFT140-202ENST00000397417 EDRF1Q3B7T1 1238 aa11.88□□□□□ -0.51
IFT140-202ENST00000397417 CBWD6Q4V339 395 aa11.88□□□□□ -0.51
IFT140-202ENST00000397417 CBWD3Q5JTY5 395 aa11.88□□□□□ -0.51
IFT140-202ENST00000397417 CBWD5Q5RIA9 395 aa11.88□□□□□ -0.51
IFT140-202ENST00000397417 GPAT2Q6NUI2 795 aa11.88□□□□□ -0.51
IFT140-202ENST00000397417 PDCD6IPQ8WUM4 868 aaKnown RBP11.88□□□□□ -0.51
IFT140-202ENST00000397417 LENG1Q96BZ8 264 aaPredicted RBP11.88□□□□□ -0.51
IFT140-202ENST00000397417 L3MBTL3Q96JM7 780 aaPredicted RBP11.88□□□□□ -0.51
IFT140-202ENST00000397417 C9orf72Q96LT7 481 aa11.88□□□□□ -0.51
IFT140-202ENST00000397417 PARK7Q99497 189 aaKnown RBP11.88□□□□□ -0.51
IFT140-202ENST00000397417 CAPS2Q9BXY5 557 aa11.88□□□□□ -0.51
IFT140-202ENST00000397417 STK33Q9BYT3 514 aa11.88□□□□□ -0.51
IFT140-202ENST00000397417 TUT1Q9H6E5 874 aaKnown RBP11.88□□□□□ -0.51
IFT140-202ENST00000397417 ABCF3Q9NUQ8 709 aa11.88□□□□□ -0.51
IFT140-202ENST00000397417 PLAGL2Q9UPG8 496 aa11.88□□□□□ -0.51
IFT140-202ENST00000397417 USP54Q70EL1 1684 aa11.88□□□□□ -0.51
IFT140-202ENST00000397417 MCF2LO15068 1137 aa11.88□□□□□ -0.51
IFT140-202ENST00000397417 SUPT20HL2P0C7V6 817 aa11.88□□□□□ -0.51
IFT140-202ENST00000397417 ERFP50548 548 aa11.88□□□□□ -0.51
IFT140-202ENST00000397417 CDH6P55285 790 aa11.88□□□□□ -0.51
IFT140-202ENST00000397417 HNRNPH2P55795 449 aaKnown RBP11.88□□□□□ -0.51
IFT140-202ENST00000397417 TSTA3Q13630 321 aaPredicted RBP11.88□□□□□ -0.51
IFT140-202ENST00000397417 MAP7D3Q8IWC1 876 aa11.88□□□□□ -0.51
IFT140-202ENST00000397417 RHOT2Q8IXI1 618 aa11.88□□□□□ -0.51
IFT140-202ENST00000397417 SENP7Q9BQF6 1050 aa11.88□□□□□ -0.51
IFT140-202ENST00000397417 STMN4Q9H169 189 aaPredicted RBP11.88□□□□□ -0.51
IFT140-202ENST00000397417 COL20A1Q9P218 1284 aa11.88□□□□□ -0.51
IFT140-202ENST00000397417 NAGPAQ9UK23 515 aa11.88□□□□□ -0.51
IFT140-202ENST00000397417 SNX12Q9UMY4 172 aa11.88□□□□□ -0.51
IFT140-202ENST00000397417 ALG6Q9Y672 507 aa11.88□□□□□ -0.51
IFT140-202ENST00000397417 E2F8A0AVK6 867 aa11.87□□□□□ -0.51
IFT140-202ENST00000397417 ZBED1O96006 694 aa11.87□□□□□ -0.51
IFT140-202ENST00000397417 SRGAP2BP0DMP2 458 aa11.87□□□□□ -0.51
IFT140-202ENST00000397417 CARSP49589 748 aaKnown RBP11.87□□□□□ -0.51
IFT140-202ENST00000397417 PLCB4Q15147 1175 aa11.87□□□□□ -0.51
IFT140-202ENST00000397417 ZNF571Q7Z3V5 609 aaPredicted RBP11.87□□□□□ -0.51
IFT140-202ENST00000397417 EXOC8Q8IYI6 725 aa11.87□□□□□ -0.51
IFT140-202ENST00000397417 CHST13Q8NET6 341 aa11.87□□□□□ -0.51
IFT140-202ENST00000397417 RILPQ96NA2 401 aa11.87□□□□□ -0.51
IFT140-202ENST00000397417 NSRP1Q9H0G5 558 aaKnown RBP11.87□□□□□ -0.51
IFT140-202ENST00000397417 HSD3B7Q9H2F3 369 aa11.87□□□□□ -0.51
IFT140-202ENST00000397417 SAYSD1Q9NPB0 183 aa11.87□□□□□ -0.51
IFT140-202ENST00000397417 SSX2IPQ9Y2D8 614 aa11.87□□□□□ -0.51
IFT140-202ENST00000397417 COL1A1P02452 1464 aaPredicted RBP11.87□□□□□ -0.51
IFT140-202ENST00000397417 FAM237AA0A1B0GTK4 181 aa11.87□□□□□ -0.51
IFT140-202ENST00000397417 KRT14P02533 472 aa11.87□□□□□ -0.51
IFT140-202ENST00000397417 ARL4AP40617 200 aa11.87□□□□□ -0.51
IFT140-202ENST00000397417 PSMC4P43686 418 aa11.87□□□□□ -0.51
IFT140-202ENST00000397417 EPHB4P54760 987 aa11.87□□□□□ -0.51
IFT140-202ENST00000397417 MYL6P60660 151 aa11.87□□□□□ -0.51
IFT140-202ENST00000397417 SEPT6Q14141 434 aa11.87□□□□□ -0.51
IFT140-202ENST00000397417 PSMD6Q15008 389 aa11.87□□□□□ -0.51
IFT140-202ENST00000397417 CCDC137Q6PK04 289 aaKnown RBP11.87□□□□□ -0.51
IFT140-202ENST00000397417 RFFLQ8WZ73 363 aa11.87□□□□□ -0.51
IFT140-202ENST00000397417 ANKS1AQ92625 1134 aa11.87□□□□□ -0.51
IFT140-202ENST00000397417 MTMR8Q96EF0 704 aa11.87□□□□□ -0.51
IFT140-202ENST00000397417 SUDS3Q9H7L9 328 aaPredicted RBP11.87□□□□□ -0.51
IFT140-202ENST00000397417 ALG13Q9NP73 1137 aaKnown RBP11.87□□□□□ -0.51
IFT140-202ENST00000397417 PLAAQ9Y263 795 aa11.87□□□□□ -0.51
IFT140-202ENST00000397417 PGK1P00558 417 aa11.87□□□□□ -0.51
IFT140-202ENST00000397417 IVLP07476 585 aa11.87□□□□□ -0.51
IFT140-202ENST00000397417 PDE1BQ01064 536 aa11.87□□□□□ -0.51
IFT140-202ENST00000397417 FAXCQ5TGI0 409 aa11.87□□□□□ -0.51
IFT140-202ENST00000397417 FAM47EQ6ZV65 393 aa11.87□□□□□ -0.51
IFT140-202ENST00000397417 METTL23Q86XA0 190 aa11.87□□□□□ -0.51
IFT140-202ENST00000397417 SHISA4Q96DD7 197 aa11.87□□□□□ -0.51
IFT140-202ENST00000397417 CYFIP2Q96F07 1278 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms