RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 RPS6KA5O75582 802 aa18.4■□□□□ 0.54
TSPAN4-205ENST00000397406 KRT13P13646 458 aa18.4■□□□□ 0.54
TSPAN4-205ENST00000397406 NCBP1Q09161 790 aaKnown RBP18.4■□□□□ 0.54
TSPAN4-205ENST00000397406 KCNH2Q12809 1159 aa18.4■□□□□ 0.54
TSPAN4-205ENST00000397406 ADGRE1Q14246 886 aa18.4■□□□□ 0.54
TSPAN4-205ENST00000397406 HSP90AA2PQ14568 343 aaPredicted RBP18.4■□□□□ 0.54
TSPAN4-205ENST00000397406 LPIN1Q14693 890 aa18.4■□□□□ 0.54
TSPAN4-205ENST00000397406 SEZ6Q53EL9 994 aa18.4■□□□□ 0.54
TSPAN4-205ENST00000397406 DCAF17Q5H9S7 520 aaPredicted RBP18.4■□□□□ 0.54
TSPAN4-205ENST00000397406 C1orf220Q5T0J3 134 aa18.4■□□□□ 0.54
TSPAN4-205ENST00000397406 NOTUMQ6P988 496 aa18.4■□□□□ 0.54
TSPAN4-205ENST00000397406 USP38Q8NB14 1042 aa18.4■□□□□ 0.54
TSPAN4-205ENST00000397406 AGO3Q9H9G7 860 aaKnown RBP18.4■□□□□ 0.54
TSPAN4-205ENST00000397406 CPSF3Q9UKF6 684 aaKnown RBP18.4■□□□□ 0.54
TSPAN4-205ENST00000397406 SQORQ9Y6N5 450 aa18.4■□□□□ 0.54
TSPAN4-205ENST00000397406 TRIP11Q15643 1979 aa18.4■□□□□ 0.54
TSPAN4-205ENST00000397406 PDCD11Q14690 1871 aaKnown RBP18.4■□□□□ 0.54
TSPAN4-205ENST00000397406 TNFSF9P41273 254 aa18.4■□□□□ 0.54
TSPAN4-205ENST00000397406 VAMP7P51809 220 aa18.4■□□□□ 0.54
TSPAN4-205ENST00000397406 DLG4P78352 724 aa18.4■□□□□ 0.54
TSPAN4-205ENST00000397406 ENPEPQ07075 957 aa18.4■□□□□ 0.54
TSPAN4-205ENST00000397406 CCDC173Q0VFZ6 552 aa18.4■□□□□ 0.54
TSPAN4-205ENST00000397406 BFSP2Q13515 415 aa18.4■□□□□ 0.54
TSPAN4-205ENST00000397406 PTPN21Q16825 1174 aa18.4■□□□□ 0.54
TSPAN4-205ENST00000397406 TCERG1LQ5VWI1 586 aa18.4■□□□□ 0.54
TSPAN4-205ENST00000397406 SLC27A1Q6PCB7 646 aa18.4■□□□□ 0.54
TSPAN4-205ENST00000397406 VSTM4Q8IW00 320 aa18.4■□□□□ 0.54
TSPAN4-205ENST00000397406 CCDC155Q8N6L0 562 aa18.4■□□□□ 0.54
TSPAN4-205ENST00000397406 CEP120Q8N960 986 aa18.4■□□□□ 0.54
TSPAN4-205ENST00000397406 MAFAQ8NHW3 353 aaPredicted RBP18.4■□□□□ 0.54
TSPAN4-205ENST00000397406 TMC2Q8TDI7 906 aa18.4■□□□□ 0.54
TSPAN4-205ENST00000397406 PARD3BQ8TEW8 1205 aa18.4■□□□□ 0.54
TSPAN4-205ENST00000397406 PPP1R9BQ96SB3 815 aa18.4■□□□□ 0.54
TSPAN4-205ENST00000397406 ADPGKQ9BRR6 497 aa18.4■□□□□ 0.54
TSPAN4-205ENST00000397406 ERVK-5Q9HDB9 667 aa18.4■□□□□ 0.54
TSPAN4-205ENST00000397406 ST3GAL5Q9UNP4 418 aa18.4■□□□□ 0.54
TSPAN4-205ENST00000397406 PIN4Q9Y237 131 aaKnown RBP18.4■□□□□ 0.54
TSPAN4-205ENST00000397406 SLC4A7Q9Y6M7 1214 aa18.4■□□□□ 0.54
TSPAN4-205ENST00000397406 TET1Q8NFU7 2136 aa18.39■□□□□ 0.53
TSPAN4-205ENST00000397406 PES1O00541 588 aaKnown RBP18.39■□□□□ 0.53
TSPAN4-205ENST00000397406 AFPP02771 609 aaKnown RBP18.39■□□□□ 0.53
TSPAN4-205ENST00000397406 CXCL10P02778 98 aa18.39■□□□□ 0.53
TSPAN4-205ENST00000397406 PFKMP08237 780 aa18.39■□□□□ 0.53
TSPAN4-205ENST00000397406 TRIM49P0CI25 452 aa18.39■□□□□ 0.53
TSPAN4-205ENST00000397406 TRIM49CP0CI26 452 aa18.39■□□□□ 0.53
TSPAN4-205ENST00000397406 GHRP10912 638 aa18.39■□□□□ 0.53
TSPAN4-205ENST00000397406 SELPP16109 830 aa18.39■□□□□ 0.53
TSPAN4-205ENST00000397406 RFC2P35250 354 aa18.39■□□□□ 0.53
TSPAN4-205ENST00000397406 WNT7BP56706 349 aa18.39■□□□□ 0.53
TSPAN4-205ENST00000397406 UBXN1Q04323 297 aa18.39■□□□□ 0.53
TSPAN4-205ENST00000397406 PSMD6Q15008 389 aa18.39■□□□□ 0.53
TSPAN4-205ENST00000397406 DCAF4L1Q3SXM0 396 aa18.39■□□□□ 0.53
TSPAN4-205ENST00000397406 BRSK2Q8IWQ3 736 aa18.39■□□□□ 0.53
TSPAN4-205ENST00000397406 THNSL1Q8IYQ7 743 aa18.39■□□□□ 0.53
TSPAN4-205ENST00000397406 CCDC51Q96ER9 411 aa18.39■□□□□ 0.53
TSPAN4-205ENST00000397406 PRDM12Q9H4Q4 367 aa18.39■□□□□ 0.53
TSPAN4-205ENST00000397406 RBAKQ9NYW8 714 aaPredicted RBP18.39■□□□□ 0.53
TSPAN4-205ENST00000397406 A0A1W2PQC6 194 aa18.38■□□□□ 0.53
TSPAN4-205ENST00000397406 ZBBXA8MT70 800 aa18.38■□□□□ 0.53
TSPAN4-205ENST00000397406 GPR182O15218 404 aa18.38■□□□□ 0.53
TSPAN4-205ENST00000397406 NPTXRO95502 500 aa18.38■□□□□ 0.53
TSPAN4-205ENST00000397406 FOSL2P15408 326 aa18.38■□□□□ 0.53
TSPAN4-205ENST00000397406 ATP2A2P16615 1042 aaKnown RBP18.38■□□□□ 0.53
TSPAN4-205ENST00000397406 UBXN11Q5T124 520 aa18.38■□□□□ 0.53
TSPAN4-205ENST00000397406 FKBP15Q5T1M5 1219 aa18.38■□□□□ 0.53
TSPAN4-205ENST00000397406 LRRC8DQ7L1W4 858 aa18.38■□□□□ 0.53
TSPAN4-205ENST00000397406 SPRED2Q7Z698 418 aa18.38■□□□□ 0.53
TSPAN4-205ENST00000397406 TMCO2Q7Z6W1 182 aaPredicted RBP18.38■□□□□ 0.53
TSPAN4-205ENST00000397406 TMEM192Q8IY95 271 aa18.38■□□□□ 0.53
TSPAN4-205ENST00000397406 ERGIC2Q96RQ1 377 aa18.38■□□□□ 0.53
TSPAN4-205ENST00000397406 EIF2AQ9BY44 585 aaKnown RBP18.38■□□□□ 0.53
TSPAN4-205ENST00000397406 PADI3Q9ULW8 664 aa18.38■□□□□ 0.53
TSPAN4-205ENST00000397406 VCANP13611 3396 aa18.38■□□□□ 0.53
TSPAN4-205ENST00000397406 LRRIQ3A6PVS8 624 aaPredicted RBP18.37■□□□□ 0.53
TSPAN4-205ENST00000397406 CD52P31358 61 aa18.37■□□□□ 0.53
TSPAN4-205ENST00000397406 GRM5P41594 1212 aa18.37■□□□□ 0.53
TSPAN4-205ENST00000397406 CLDN10P78369 228 aa18.37■□□□□ 0.53
TSPAN4-205ENST00000397406 POU5F1Q01860 360 aaKnown RBP18.37■□□□□ 0.53
TSPAN4-205ENST00000397406 NFX1Q12986 1120 aaKnown RBP18.37■□□□□ 0.53
TSPAN4-205ENST00000397406 ENOX2Q16206 610 aaKnown RBP18.37■□□□□ 0.53
TSPAN4-205ENST00000397406 KYAT1Q16773 422 aa18.37■□□□□ 0.53
TSPAN4-205ENST00000397406 APBB1IPQ7Z5R6 666 aaPredicted RBP18.37■□□□□ 0.53
TSPAN4-205ENST00000397406 CCDC127Q96BQ5 260 aa18.37■□□□□ 0.53
TSPAN4-205ENST00000397406 ITIH6Q6UXX5 1313 aa18.36■□□□□ 0.53
TSPAN4-205ENST00000397406 MEFVO15553 781 aaPredicted RBP18.36■□□□□ 0.53
TSPAN4-205ENST00000397406 CLTAP09496 248 aa18.36■□□□□ 0.53
TSPAN4-205ENST00000397406 STAG3L1P0CL83 205 aa18.36■□□□□ 0.53
TSPAN4-205ENST00000397406 DEKP35659 375 aaKnown RBP18.36■□□□□ 0.53
TSPAN4-205ENST00000397406 FMO5P49326 533 aa18.36■□□□□ 0.53
TSPAN4-205ENST00000397406 OSTNP61366 133 aa18.36■□□□□ 0.53
TSPAN4-205ENST00000397406 PPP3CAQ08209 521 aa18.36■□□□□ 0.53
TSPAN4-205ENST00000397406 PAK2Q13177 524 aa18.36■□□□□ 0.53
TSPAN4-205ENST00000397406 RAB30Q15771 203 aa18.36■□□□□ 0.53
TSPAN4-205ENST00000397406 TMC6Q7Z403 805 aa18.36■□□□□ 0.53
TSPAN4-205ENST00000397406 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.36■□□□□ 0.531e-6■■■■□ 22.2
TSPAN4-205ENST00000397406 MTIF3Q9H2K0 278 aaKnown RBP18.36■□□□□ 0.53
TSPAN4-205ENST00000397406 PDE11AQ9HCR9 933 aa18.36■□□□□ 0.53
TSPAN4-205ENST00000397406 CHST12Q9NRB3 414 aa18.36■□□□□ 0.53
TSPAN4-205ENST00000397406 MSRAQ9UJ68 235 aa18.36■□□□□ 0.53
TSPAN4-205ENST00000397406 SIK3Q9Y2K2 1263 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms