RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 POU5F1Q01860 360 aaKnown RBP25.64■■□□□ 1.7
TSPAN4-203ENST00000397397 HSP90AA4PQ58FG1 418 aa25.64■■□□□ 1.7
TSPAN4-203ENST00000397397 LUZP1Q86V48 1076 aa25.64■■□□□ 1.7
TSPAN4-203ENST00000397397 CREBRFQ8IUR6 639 aa25.64■■□□□ 1.7
TSPAN4-203ENST00000397397 SNX27Q96L92 541 aa25.64■■□□□ 1.7
TSPAN4-203ENST00000397397 MFSD14AQ96MC6 490 aa25.64■■□□□ 1.7
TSPAN4-203ENST00000397397 CXXC1Q9P0U4 656 aaPredicted RBP25.64■■□□□ 1.7
TSPAN4-203ENST00000397397 RALGAPA2Q2PPJ7 1873 aa25.64■■□□□ 1.69
TSPAN4-203ENST00000397397 LACTBL1A8MY62 500 aa25.63■■□□□ 1.69
TSPAN4-203ENST00000397397 MEFVO15553 781 aaPredicted RBP25.63■■□□□ 1.69
TSPAN4-203ENST00000397397 FGFR1P11362 822 aa25.63■■□□□ 1.69
TSPAN4-203ENST00000397397 PPP2R3AQ06190 1150 aa25.63■■□□□ 1.69
TSPAN4-203ENST00000397397 FAM114A1Q8IWE2 563 aa25.63■■□□□ 1.69
TSPAN4-203ENST00000397397 CRIPAKQ8N1N5 446 aa25.63■■□□□ 1.69
TSPAN4-203ENST00000397397 TOP1MTQ969P6 601 aa25.63■■□□□ 1.69
TSPAN4-203ENST00000397397 PLEKHA5Q9HAU0 1116 aa25.63■■□□□ 1.69
TSPAN4-203ENST00000397397 MAGEC2Q9UBF1 373 aaPredicted RBP25.63■■□□□ 1.69
TSPAN4-203ENST00000397397 SLC4A7Q9Y6M7 1214 aa25.63■■□□□ 1.69
TSPAN4-203ENST00000397397 ANK1P16157 1881 aa25.63■■□□□ 1.69
TSPAN4-203ENST00000397397 TRIP11Q15643 1979 aa25.63■■□□□ 1.69
TSPAN4-203ENST00000397397 TTC26A0AVF1 554 aa25.63■■□□□ 1.69
TSPAN4-203ENST00000397397 IL18RAPO95256 599 aa25.63■■□□□ 1.69
TSPAN4-203ENST00000397397 KRT13P13646 458 aa25.63■■□□□ 1.69
TSPAN4-203ENST00000397397 MLH1P40692 756 aa25.63■■□□□ 1.69
TSPAN4-203ENST00000397397 C9orf50Q5SZB4 431 aa25.63■■□□□ 1.69
TSPAN4-203ENST00000397397 INTS8Q75QN2 995 aaKnown RBP25.63■■□□□ 1.69
TSPAN4-203ENST00000397397 FRMD5Q7Z6J6 570 aa25.63■■□□□ 1.69
TSPAN4-203ENST00000397397 IRF2BP1Q8IU81 584 aa25.63■■□□□ 1.69
TSPAN4-203ENST00000397397 RNF214Q8ND24 703 aa25.63■■□□□ 1.69
TSPAN4-203ENST00000397397 HELQQ8TDG4 1101 aa25.63■■□□□ 1.69
TSPAN4-203ENST00000397397 CCDC127Q96BQ5 260 aa25.63■■□□□ 1.69
TSPAN4-203ENST00000397397 CNOT6LQ96LI5 555 aaKnown RBP25.63■■□□□ 1.69
TSPAN4-203ENST00000397397 GAD1Q99259 594 aa25.63■■□□□ 1.69
TSPAN4-203ENST00000397397 METTL14Q9HCE5 456 aaKnown RBP25.63■■□□□ 1.69
TSPAN4-203ENST00000397397 PDE11AQ9HCR9 933 aa25.63■■□□□ 1.69
TSPAN4-203ENST00000397397 RNF19AQ9NV58 838 aa25.63■■□□□ 1.69
TSPAN4-203ENST00000397397 ARMCX3Q9UH62 379 aaPredicted RBP25.63■■□□□ 1.69
TSPAN4-203ENST00000397397 PTPRSQ13332 1948 aa25.62■■□□□ 1.69
TSPAN4-203ENST00000397397 TRIOBPQ9H2D6 2365 aa25.62■■□□□ 1.69
TSPAN4-203ENST00000397397 A0A1W2PPC1 479 aa25.62■■□□□ 1.69
TSPAN4-203ENST00000397397 ARL5CA6NH57 179 aa25.62■■□□□ 1.69
TSPAN4-203ENST00000397397 GOLGA6L19H0YKK7 550 aa25.62■■□□□ 1.69
TSPAN4-203ENST00000397397 HOXA2O43364 376 aa25.62■■□□□ 1.69
TSPAN4-203ENST00000397397 OFD1O75665 1012 aa25.62■■□□□ 1.69
TSPAN4-203ENST00000397397 WNT7BP56706 349 aa25.62■■□□□ 1.69
TSPAN4-203ENST00000397397 PSMD6Q15008 389 aa25.62■■□□□ 1.69
TSPAN4-203ENST00000397397 SURF1Q15526 300 aa25.62■■□□□ 1.69
TSPAN4-203ENST00000397397 CLLU1OSQ5K130 101 aa25.62■■□□□ 1.69
TSPAN4-203ENST00000397397 FAM117BQ6P1L5 589 aa25.62■■□□□ 1.69
TSPAN4-203ENST00000397397 GLB1LQ6UWU2 654 aa25.62■■□□□ 1.69
TSPAN4-203ENST00000397397 ALKAL1Q6UXT8 129 aa25.62■■□□□ 1.69
TSPAN4-203ENST00000397397 TMCO2Q7Z6W1 182 aaPredicted RBP25.62■■□□□ 1.69
TSPAN4-203ENST00000397397 CD302Q8IX05 232 aa25.62■■□□□ 1.69
TSPAN4-203ENST00000397397 ZFP42Q96MM3 310 aa25.62■■□□□ 1.69
TSPAN4-203ENST00000397397 RPS6KC1Q96S38 1066 aa25.62■■□□□ 1.69
TSPAN4-203ENST00000397397 CXCL16Q9H2A7 254 aa25.62■■□□□ 1.69
TSPAN4-203ENST00000397397 INPP5FQ9Y2H2 1132 aa25.62■■□□□ 1.69
TSPAN4-203ENST00000397397 SPAG1Q07617 926 aa25.61■■□□□ 1.69
TSPAN4-203ENST00000397397 SHHQ15465 462 aa25.61■■□□□ 1.69
TSPAN4-203ENST00000397397 CDKAL1Q5VV42 579 aa25.61■■□□□ 1.69
TSPAN4-203ENST00000397397 GAS2L3Q86XJ1 694 aa25.61■■□□□ 1.69
TSPAN4-203ENST00000397397 ABI1Q8IZP0 508 aa25.61■■□□□ 1.69
TSPAN4-203ENST00000397397 BORCS6Q96GS4 357 aa25.61■■□□□ 1.69
TSPAN4-203ENST00000397397 RNPC3Q96LT9 517 aaKnown RBP25.61■■□□□ 1.69
TSPAN4-203ENST00000397397 FNBP1Q96RU3 617 aa25.61■■□□□ 1.69
TSPAN4-203ENST00000397397 ASB7Q9H672 318 aa25.61■■□□□ 1.69
TSPAN4-203ENST00000397397 CNTN3Q9P232 1028 aa25.61■■□□□ 1.69
TSPAN4-203ENST00000397397 KCNJ18B7U540 433 aa25.6■■□□□ 1.69
TSPAN4-203ENST00000397397 GATMP50440 423 aa25.6■■□□□ 1.69
TSPAN4-203ENST00000397397 VAMP7P51809 220 aa25.6■■□□□ 1.69
TSPAN4-203ENST00000397397 TPM4P67936 248 aa25.6■■□□□ 1.69
TSPAN4-203ENST00000397397 BFSP1Q12934 665 aa25.6■■□□□ 1.69
TSPAN4-203ENST00000397397 KCNJ12Q14500 433 aa25.6■■□□□ 1.69
TSPAN4-203ENST00000397397 XKR4Q5GH76 650 aa25.6■■□□□ 1.69
TSPAN4-203ENST00000397397 RASIP1Q5U651 963 aa25.6■■□□□ 1.69
TSPAN4-203ENST00000397397 TDHQ8IZJ6 230 aa25.6■■□□□ 1.69
TSPAN4-203ENST00000397397 PLEKHO2Q8TD55 490 aa25.6■■□□□ 1.69
TSPAN4-203ENST00000397397 TMC2Q8TDI7 906 aa25.6■■□□□ 1.69
TSPAN4-203ENST00000397397 PARD3BQ8TEW8 1205 aa25.6■■□□□ 1.69
TSPAN4-203ENST00000397397 SLC9A7Q96T83 725 aa25.6■■□□□ 1.69
TSPAN4-203ENST00000397397 HSD3B7Q9H2F3 369 aa25.6■■□□□ 1.69
TSPAN4-203ENST00000397397 PDCD11Q14690 1871 aaKnown RBP25.59■■□□□ 1.69
TSPAN4-203ENST00000397397 DLATP10515 647 aaKnown RBP25.59■■□□□ 1.69
TSPAN4-203ENST00000397397 CDK11BP21127 795 aaKnown RBP25.59■■□□□ 1.69
TSPAN4-203ENST00000397397 MTIF2P46199 727 aaKnown RBP25.59■■□□□ 1.69
TSPAN4-203ENST00000397397 SCNN1GP51170 649 aa25.59■■□□□ 1.69
TSPAN4-203ENST00000397397 AFF1P51825 1210 aaKnown RBP25.59■■□□□ 1.69
TSPAN4-203ENST00000397397 MARSP56192 900 aaKnown RBP25.59■■□□□ 1.69
TSPAN4-203ENST00000397397 GLRA4Q5JXX5 417 aa25.59■■□□□ 1.69
TSPAN4-203ENST00000397397 USP37Q86T82 979 aa25.59■■□□□ 1.69
TSPAN4-203ENST00000397397 URGCPQ8TCY9 931 aa25.59■■□□□ 1.69
TSPAN4-203ENST00000397397 KIF12Q96FN5 646 aa25.59■■□□□ 1.69
TSPAN4-203ENST00000397397 TMEM117Q9H0C3 514 aa25.59■■□□□ 1.69
TSPAN4-203ENST00000397397 MIOSQ9NXC5 875 aa25.59■■□□□ 1.69
TSPAN4-203ENST00000397397 SOX1O00570 391 aaPredicted RBP25.58■■□□□ 1.69
TSPAN4-203ENST00000397397 PTGESO14684 152 aa25.58■■□□□ 1.69
TSPAN4-203ENST00000397397 KCNE1P15382 129 aa25.58■■□□□ 1.69
TSPAN4-203ENST00000397397 DLG4P78352 724 aa25.58■■□□□ 1.69
TSPAN4-203ENST00000397397 TCP11X2Q5H9J9 407 aa25.58■■□□□ 1.69
TSPAN4-203ENST00000397397 DCAF17Q5H9S7 520 aaPredicted RBP25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms