RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 XKR4Q5GH76 650 aa15.27■□□□□ 0.04
SEC13-204ENST00000397099 FUT10Q6P4F1 479 aa15.27■□□□□ 0.04
SEC13-204ENST00000397099 SV2BQ7L1I2 683 aa15.27■□□□□ 0.04
SEC13-204ENST00000397099 HAUS6Q7Z4H7 955 aa15.27■□□□□ 0.04
SEC13-204ENST00000397099 MYCT1Q8N699 235 aa15.27■□□□□ 0.04
SEC13-204ENST00000397099 DDX27Q96GQ7 796 aaKnown RBP15.27■□□□□ 0.04
SEC13-204ENST00000397099 RIPOR3Q96MK2 946 aa15.27■□□□□ 0.04
SEC13-204ENST00000397099 USP28Q96RU2 1077 aa15.27■□□□□ 0.04
SEC13-204ENST00000397099 REEP2Q9BRK0 252 aa15.27■□□□□ 0.04
SEC13-204ENST00000397099 TARS2Q9BW92 718 aaKnown RBP15.27■□□□□ 0.04
SEC13-204ENST00000397099 VN1R3Q9BXE9 311 aa15.27■□□□□ 0.04
SEC13-204ENST00000397099 CDT1Q9H211 546 aa15.27■□□□□ 0.04
SEC13-204ENST00000397099 ADAM7Q9H2U9 754 aa15.27■□□□□ 0.04
SEC13-204ENST00000397099 RXFP1Q9HBX9 757 aa15.27■□□□□ 0.04
SEC13-204ENST00000397099 FNIP2Q9P278 1114 aa15.27■□□□□ 0.04
SEC13-204ENST00000397099 SEL1LQ9UBV2 794 aa15.27■□□□□ 0.04
SEC13-204ENST00000397099 GDAQ9Y2T3 454 aa15.27■□□□□ 0.04
SEC13-204ENST00000397099 TRIP11Q15643 1979 aa15.27■□□□□ 0.03
SEC13-204ENST00000397099 PTGESO14684 152 aa15.26■□□□□ 0.03
SEC13-204ENST00000397099 PPP6R2O75170 966 aa15.26■□□□□ 0.03
SEC13-204ENST00000397099 YEATS4O95619 227 aa15.26■□□□□ 0.03
SEC13-204ENST00000397099 KCNE1P15382 129 aa15.26■□□□□ 0.03
SEC13-204ENST00000397099 MCL1Q07820 350 aa15.26■□□□□ 0.03
SEC13-204ENST00000397099 CBX2Q14781 532 aaPredicted RBP15.26■□□□□ 0.03
SEC13-204ENST00000397099 NOLC1Q14978 699 aaKnown RBP eCLIP15.26■□□□□ 0.03
SEC13-204ENST00000397099 STK38Q15208 465 aa15.26■□□□□ 0.03
SEC13-204ENST00000397099 HERC4Q5GLZ8 1057 aaPredicted RBP15.26■□□□□ 0.03
SEC13-204ENST00000397099 KIAA0319Q5VV43 1072 aa15.26■□□□□ 0.03
SEC13-204ENST00000397099 SYCE2Q6PIF2 218 aa15.26■□□□□ 0.03
SEC13-204ENST00000397099 TAS1R3Q7RTX0 852 aa15.26■□□□□ 0.03
SEC13-204ENST00000397099 SLC22A17Q8WUG5 538 aa15.26■□□□□ 0.03
SEC13-204ENST00000397099 AUTS2Q8WXX7 1259 aa15.26■□□□□ 0.03
SEC13-204ENST00000397099 BICD1Q96G01 975 aa15.26■□□□□ 0.03
SEC13-204ENST00000397099 EPSTI1Q96J88 318 aa15.26■□□□□ 0.03
SEC13-204ENST00000397099 KLHL5Q96PQ7 755 aa15.26■□□□□ 0.03
SEC13-204ENST00000397099 LRRC27Q9C0I9 530 aa15.26■□□□□ 0.03
SEC13-204ENST00000397099 S1PR5Q9H228 398 aa15.26■□□□□ 0.03
SEC13-204ENST00000397099 ST6GALNAC4Q9H4F1 302 aa15.26■□□□□ 0.03
SEC13-204ENST00000397099 SFXN1Q9H9B4 322 aa15.26■□□□□ 0.03
SEC13-204ENST00000397099 PLEKHA5Q9HAU0 1116 aa15.26■□□□□ 0.03
SEC13-204ENST00000397099 FOXD4L1Q9NU39 408 aa15.26■□□□□ 0.03
SEC13-204ENST00000397099 NR2E1Q9Y466 385 aa15.26■□□□□ 0.03
SEC13-204ENST00000397099 MTCL1Q9Y4B5 1905 aaKnown RBP15.25■□□□□ 0.03
SEC13-204ENST00000397099 LOC730098B7Z3J9 87 aa15.25■□□□□ 0.03
SEC13-204ENST00000397099 SPTLC2O15270 562 aa15.25■□□□□ 0.03
SEC13-204ENST00000397099 TRAK2O60296 914 aa15.25■□□□□ 0.03
SEC13-204ENST00000397099 PIGRP01833 764 aa15.25■□□□□ 0.03
SEC13-204ENST00000397099 EDN1P05305 212 aa15.25■□□□□ 0.03
SEC13-204ENST00000397099 CNPP09543 421 aaKnown RBP15.25■□□□□ 0.03
SEC13-204ENST00000397099 GAP43P17677 238 aa15.25■□□□□ 0.03
SEC13-204ENST00000397099 SP100P23497 879 aaPredicted RBP15.25■□□□□ 0.03
SEC13-204ENST00000397099 CLCN4P51793 760 aa15.25■□□□□ 0.03
SEC13-204ENST00000397099 CEBPZQ03701 1054 aaKnown RBP15.25■□□□□ 0.03
SEC13-204ENST00000397099 GRIN1Q05586 938 aa15.25■□□□□ 0.03
SEC13-204ENST00000397099 DHX8Q14562 1220 aaKnown RBP15.25■□□□□ 0.03
SEC13-204ENST00000397099 MCM6Q14566 821 aa15.25■□□□□ 0.03
SEC13-204ENST00000397099 NAB2Q15742 525 aa15.25■□□□□ 0.03
SEC13-204ENST00000397099 DCLRE1AQ6PJP8 1040 aa15.25■□□□□ 0.03
SEC13-204ENST00000397099 ALKAL1Q6UXT8 129 aa15.25■□□□□ 0.03
SEC13-204ENST00000397099 C15orf39Q6ZRI6 1047 aa15.25■□□□□ 0.03
SEC13-204ENST00000397099 LINC00301Q8NCQ3 95 aa15.25■□□□□ 0.03
SEC13-204ENST00000397099 HVCN1Q96D96 273 aa15.25■□□□□ 0.03
SEC13-204ENST00000397099 FBXL18Q96ME1 805 aa15.25■□□□□ 0.03
SEC13-204ENST00000397099 PPP1R10Q96QC0 940 aaKnown RBP15.25■□□□□ 0.03
SEC13-204ENST00000397099 RHOBTB2Q9BYZ6 727 aa15.25■□□□□ 0.03
SEC13-204ENST00000397099 PLEKHA4Q9H4M7 779 aa15.25■□□□□ 0.03
SEC13-204ENST00000397099 TSHZ2Q9NRE2 1034 aa15.25■□□□□ 0.03
SEC13-204ENST00000397099 CFAP45Q9UL16 551 aa15.25■□□□□ 0.03
SEC13-204ENST00000397099 TBX20Q9UMR3 447 aa15.25■□□□□ 0.03
SEC13-204ENST00000397099 SMIM28A0A1B0GU29 152 aa15.24■□□□□ 0.03
SEC13-204ENST00000397099 SPDYE4A6NLX3 237 aa15.24■□□□□ 0.03
SEC13-204ENST00000397099 K7ENM7 598 aa15.24■□□□□ 0.03
SEC13-204ENST00000397099 HNRNPDLO14979 420 aaKnown RBP15.24■□□□□ 0.03
SEC13-204ENST00000397099 XPOTO43592 962 aaKnown RBP15.24■□□□□ 0.03
SEC13-204ENST00000397099 GLUD1P00367 558 aa15.24■□□□□ 0.03
SEC13-204ENST00000397099 CLTAP09496 248 aa15.24■□□□□ 0.03
SEC13-204ENST00000397099 ZSCAN22P10073 491 aaPredicted RBP15.24■□□□□ 0.03
SEC13-204ENST00000397099 RPL9P32969 192 aaKnown RBP15.24■□□□□ 0.03
SEC13-204ENST00000397099 STAT6P42226 847 aa15.24■□□□□ 0.03
SEC13-204ENST00000397099 MATR3P43243 847 aaKnown RBP eCLIP15.24■□□□□ 0.03
SEC13-204ENST00000397099 LIG4P49917 911 aa15.24■□□□□ 0.03
SEC13-204ENST00000397099 GTF2BQ00403 316 aa15.24■□□□□ 0.03
SEC13-204ENST00000397099 ALCAMQ13740 583 aa15.24■□□□□ 0.03
SEC13-204ENST00000397099 ATAT1Q5SQI0 421 aa15.24■□□□□ 0.03
SEC13-204ENST00000397099 CMASQ8NFW8 434 aaPredicted RBP15.24■□□□□ 0.03
SEC13-204ENST00000397099 KCNG4Q8TDN1 519 aa15.24■□□□□ 0.03
SEC13-204ENST00000397099 SNX27Q96L92 541 aa15.24■□□□□ 0.03
SEC13-204ENST00000397099 TTPALQ9BTX7 342 aa15.24■□□□□ 0.03
SEC13-204ENST00000397099 CUEDC2Q9H467 287 aa15.24■□□□□ 0.03
SEC13-204ENST00000397099 CNTN3Q9P232 1028 aa15.24■□□□□ 0.03
SEC13-204ENST00000397099 USP20Q9Y2K6 914 aa15.24■□□□□ 0.03
SEC13-204ENST00000397099 PDCD11Q14690 1871 aaKnown RBP15.23■□□□□ 0.03
SEC13-204ENST00000397099 NPHP3-ACAD11A0A0J9YXS1 232 aa15.23■□□□□ 0.03
SEC13-204ENST00000397099 CASTOR2A6NHX0 329 aa15.23■□□□□ 0.03
SEC13-204ENST00000397099 C2CD2LO14523 706 aa15.23■□□□□ 0.03
SEC13-204ENST00000397099 ABLIM1O14639 778 aa15.23■□□□□ 0.03
SEC13-204ENST00000397099 PAX3P23760 479 aa15.23■□□□□ 0.03
SEC13-204ENST00000397099 AMPD3Q01432 767 aa15.23■□□□□ 0.03
SEC13-204ENST00000397099 POU5F1Q01860 360 aaKnown RBP15.23■□□□□ 0.03
SEC13-204ENST00000397099 SLFN12LQ6IEE8 588 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms