RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 YAF2Q8IY57 180 aa16.53■□□□□ 0.24
GNE-202ENST00000396594 KDM4CQ9H3R0 1056 aa16.53■□□□□ 0.24
GNE-202ENST00000396594 ADARB2Q9NS39 739 aaKnown RBP16.53■□□□□ 0.24
GNE-202ENST00000396594 PIK3R2O00459 728 aa16.53■□□□□ 0.24
GNE-202ENST00000396594 SCN4BQ8IWT1 228 aa16.53■□□□□ 0.24
GNE-202ENST00000396594 MRIQ9BWK5 157 aa16.53■□□□□ 0.24
GNE-202ENST00000396594 ROPN1BQ9BZX4 212 aaPredicted RBP16.53■□□□□ 0.24
GNE-202ENST00000396594 GOLPH3LQ9H4A5 285 aa16.53■□□□□ 0.24
GNE-202ENST00000396594 ROPN1Q9HAT0 212 aaPredicted RBP16.53■□□□□ 0.24
GNE-202ENST00000396594 FAM102AQ5T9C2 384 aaPredicted RBP16.53■□□□□ 0.24
GNE-202ENST00000396594 CC2D1AQ6P1N0 951 aaPredicted RBP16.53■□□□□ 0.24
GNE-202ENST00000396594 GLB1LQ6UWU2 654 aa16.53■□□□□ 0.24
GNE-202ENST00000396594 RNF149Q8NC42 400 aa16.53■□□□□ 0.24
GNE-202ENST00000396594 NOVA2Q9UNW9 492 aaKnown RBP16.53■□□□□ 0.24
GNE-202ENST00000396594 ITGA4P13612 1032 aa16.53■□□□□ 0.24
GNE-202ENST00000396594 RNF180Q86T96 592 aa16.53■□□□□ 0.24
GNE-202ENST00000396594 PRUNE1Q86TP1 453 aa16.53■□□□□ 0.24
GNE-202ENST00000396594 ERO1BQ86YB8 467 aa16.53■□□□□ 0.24
GNE-202ENST00000396594 PDZD8Q8NEN9 1154 aa16.53■□□□□ 0.24
GNE-202ENST00000396594 NRBP1Q9UHY1 535 aa16.53■□□□□ 0.24
GNE-202ENST00000396594 FER1L4A9Z1Z3 1794 aa16.52■□□□□ 0.24
GNE-202ENST00000396594 AGTP01019 485 aa16.52■□□□□ 0.24
GNE-202ENST00000396594 CDC25AP30304 524 aa16.52■□□□□ 0.24
GNE-202ENST00000396594 PDLIM2Q96JY6 352 aa16.52■□□□□ 0.24
GNE-202ENST00000396594 PAK5Q9P286 719 aa16.52■□□□□ 0.24
GNE-202ENST00000396594 SCARF1Q14162 830 aa16.52■□□□□ 0.24
GNE-202ENST00000396594 Q4G0T1 1027 aa16.52■□□□□ 0.24
GNE-202ENST00000396594 PHF2O75151 1096 aa16.52■□□□□ 0.23
GNE-202ENST00000396594 BAG2O95816 211 aa16.52■□□□□ 0.23
GNE-202ENST00000396594 CPB1P15086 417 aa16.52■□□□□ 0.23
GNE-202ENST00000396594 PDK1Q15118 436 aa16.52■□□□□ 0.23
GNE-202ENST00000396594 NAB2Q15742 525 aa16.52■□□□□ 0.23
GNE-202ENST00000396594 FIGNQ5HY92 759 aa16.52■□□□□ 0.23
GNE-202ENST00000396594 EPM2AIP1Q7L775 607 aaPredicted RBP16.52■□□□□ 0.23
GNE-202ENST00000396594 NT5DC4Q86YG4 428 aa16.52■□□□□ 0.23
GNE-202ENST00000396594 SLC44A5Q8NCS7 719 aa16.52■□□□□ 0.23
GNE-202ENST00000396594 NIF3L1Q9GZT8 377 aa16.52■□□□□ 0.23
GNE-202ENST00000396594 ATICP31939 592 aa16.52■□□□□ 0.23
GNE-202ENST00000396594 YWHAHQ04917 246 aaPredicted RBP16.52■□□□□ 0.23
GNE-202ENST00000396594 GTF2H3Q13889 308 aa16.52■□□□□ 0.23
GNE-202ENST00000396594 PPP6R3Q5H9R7 873 aaPredicted RBP16.52■□□□□ 0.23
GNE-202ENST00000396594 ANKS3Q6ZW76 656 aa16.52■□□□□ 0.23
GNE-202ENST00000396594 CYTH2Q99418 400 aa16.52■□□□□ 0.23
GNE-202ENST00000396594 NT5C1AQ9BXI3 368 aa16.52■□□□□ 0.23
GNE-202ENST00000396594 PITPNM3Q9BZ71 974 aa16.52■□□□□ 0.23
GNE-202ENST00000396594 PLAAQ9Y263 795 aa16.52■□□□□ 0.23
GNE-202ENST00000396594 SPDYE2BA6NHP3 402 aa16.51■□□□□ 0.23
GNE-202ENST00000396594 SPDYE6P0CI01 402 aa16.51■□□□□ 0.23
GNE-202ENST00000396594 CYP11B2P19099 503 aa16.51■□□□□ 0.23
GNE-202ENST00000396594 ZNF135P52742 658 aaPredicted RBP16.51■□□□□ 0.23
GNE-202ENST00000396594 CAPN12Q6ZSI9 719 aa16.51■□□□□ 0.23
GNE-202ENST00000396594 DHX40Q8IX18 779 aaKnown RBP16.51■□□□□ 0.23
GNE-202ENST00000396594 ERGIC2Q96RQ1 377 aa16.51■□□□□ 0.23
GNE-202ENST00000396594 PIDD1Q9HB75 910 aa16.51■□□□□ 0.23
GNE-202ENST00000396594 SETD1BQ9UPS6 1966 aaKnown RBP16.51■□□□□ 0.23
GNE-202ENST00000396594 IGF2BP3O00425 579 aaKnown RBP eCLIP16.51■□□□□ 0.23
GNE-202ENST00000396594 NPEPPSP55786 919 aa16.51■□□□□ 0.23
GNE-202ENST00000396594 TPI1P60174 286 aa16.51■□□□□ 0.23
GNE-202ENST00000396594 BAATQ14032 418 aaPredicted RBP16.51■□□□□ 0.23
GNE-202ENST00000396594 LINC00523Q86TU6 105 aa16.51■□□□□ 0.23
GNE-202ENST00000396594 PCSK9Q8NBP7 692 aaKnown RBP16.51■□□□□ 0.23
GNE-202ENST00000396594 GPR101Q96P66 508 aaPredicted RBP16.51■□□□□ 0.23
GNE-202ENST00000396594 COLEC11Q9BWP8 271 aa16.51■□□□□ 0.23
GNE-202ENST00000396594 MST1RQ04912 1400 aa16.51■□□□□ 0.23
GNE-202ENST00000396594 C3orf70A6NLC5 250 aaPredicted RBP16.51■□□□□ 0.23
GNE-202ENST00000396594 OPHN1O60890 802 aa16.51■□□□□ 0.23
GNE-202ENST00000396594 KPNA1P52294 538 aaPredicted RBP16.51■□□□□ 0.23
GNE-202ENST00000396594 CACNB3P54284 484 aa16.51■□□□□ 0.23
GNE-202ENST00000396594 ELAVL2Q12926 359 aaKnown RBP16.51■□□□□ 0.23
GNE-202ENST00000396594 TMC2Q8TDI7 906 aa16.51■□□□□ 0.23
GNE-202ENST00000396594 ASPSCR1Q9BZE9 553 aa16.51■□□□□ 0.23
GNE-202ENST00000396594 MTFR1LQ9H019 292 aa16.51■□□□□ 0.23
GNE-202ENST00000396594 TMX2Q9Y320 296 aa16.51■□□□□ 0.23
GNE-202ENST00000396594 FAM205AQ6ZU69 1335 aa16.51■□□□□ 0.23
GNE-202ENST00000396594 IL1R1P14778 569 aa16.51■□□□□ 0.23
GNE-202ENST00000396594 PRAMEP78395 509 aa16.51■□□□□ 0.23
GNE-202ENST00000396594 TMPRSS15P98073 1019 aa16.51■□□□□ 0.23
GNE-202ENST00000396594 ARHGAP15Q53QZ3 475 aa16.51■□□□□ 0.23
GNE-202ENST00000396594 GPR182O15218 404 aa16.5■□□□□ 0.23
GNE-202ENST00000396594 HNRNPRO43390 633 aaKnown RBP16.5■□□□□ 0.23
GNE-202ENST00000396594 NAMPTP43490 491 aa16.5■□□□□ 0.23
GNE-202ENST00000396594 RAB27AP51159 221 aa16.5■□□□□ 0.23
GNE-202ENST00000396594 ST8SIA6P61647 398 aa16.5■□□□□ 0.23
GNE-202ENST00000396594 PPP2R2AP63151 447 aa16.5■□□□□ 0.23
GNE-202ENST00000396594 NBPF20Q3BBV1 942 aa16.5■□□□□ 0.23
GNE-202ENST00000396594 C15orf52Q6ZUT6 534 aaKnown RBP16.5■□□□□ 0.23
GNE-202ENST00000396594 MCUQ8NE86 351 aa16.5■□□□□ 0.23
GNE-202ENST00000396594 ULK4Q96C45 1275 aa16.5■□□□□ 0.23
GNE-202ENST00000396594 ARHGEF26Q96DR7 871 aa16.5■□□□□ 0.23
GNE-202ENST00000396594 ZFP91Q96JP5 570 aaPredicted RBP16.5■□□□□ 0.23
GNE-202ENST00000396594 UTP6Q9NYH9 597 aaKnown RBP16.5■□□□□ 0.23
GNE-202ENST00000396594 RASA4BC9J798 803 aa16.5■□□□□ 0.23
GNE-202ENST00000396594 RASA4O43374 803 aa16.5■□□□□ 0.23
GNE-202ENST00000396594 TGFB3P10600 412 aa16.5■□□□□ 0.23
GNE-202ENST00000396594 ATP1A3P13637 1013 aa16.5■□□□□ 0.23
GNE-202ENST00000396594 ETFBP38117 255 aa16.5■□□□□ 0.23
GNE-202ENST00000396594 CDR2Q01850 454 aa16.5■□□□□ 0.23
GNE-202ENST00000396594 SETD3Q86TU7 594 aaPredicted RBP16.5■□□□□ 0.23
GNE-202ENST00000396594 ASIC4Q96FT7 647 aa16.5■□□□□ 0.23
GNE-202ENST00000396594 ELP3Q9H9T3 547 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms