RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 MOXD2PA6NHM9 499 aa13.77□□□□□ -0.21
TRIM39-204ENST00000396548 B4GALT4O60513 344 aa13.77□□□□□ -0.21
TRIM39-204ENST00000396548 PRKCIP41743 596 aa13.77□□□□□ -0.21
TRIM39-204ENST00000396548 WDR49Q8IV35 697 aa13.77□□□□□ -0.21
TRIM39-204ENST00000396548 CCDC170Q8IYT3 715 aa13.77□□□□□ -0.21
TRIM39-204ENST00000396548 FBXL13Q8NEE6 735 aa13.77□□□□□ -0.21
TRIM39-204ENST00000396548 HELQQ8TDG4 1101 aa13.77□□□□□ -0.21
TRIM39-204ENST00000396548 PAK6Q9NQU5 681 aaPredicted RBP13.77□□□□□ -0.21
TRIM39-204ENST00000396548 RAB20Q9NX57 234 aa13.77□□□□□ -0.21
TRIM39-204ENST00000396548 F8VZ95 297 aa13.76□□□□□ -0.21
TRIM39-204ENST00000396548 NDUFA10O95299 355 aa13.76□□□□□ -0.21
TRIM39-204ENST00000396548 MATR3P43243 847 aaKnown RBP eCLIP13.76□□□□□ -0.21
TRIM39-204ENST00000396548 SFMBT2Q5VUG0 894 aa13.76□□□□□ -0.21
TRIM39-204ENST00000396548 DHX38Q92620 1227 aaKnown RBP13.76□□□□□ -0.21
TRIM39-204ENST00000396548 CELF4Q9BZC1 486 aaKnown RBP13.76□□□□□ -0.21
TRIM39-204ENST00000396548 SENP6Q9GZR1 1112 aaPredicted RBP13.76□□□□□ -0.21
TRIM39-204ENST00000396548 DNAJC12Q9UKB3 198 aa13.76□□□□□ -0.21
TRIM39-204ENST00000396548 RBAK-RBAKDNI3L0D1 243 aa13.76□□□□□ -0.21
TRIM39-204ENST00000396548 ZNF263O14978 683 aa13.76□□□□□ -0.21
TRIM39-204ENST00000396548 CHRNA1P02708 482 aa13.76□□□□□ -0.21
TRIM39-204ENST00000396548 HARSP12081 509 aaKnown RBP13.76□□□□□ -0.21
TRIM39-204ENST00000396548 MRPS6P82932 125 aaKnown RBP13.76□□□□□ -0.21
TRIM39-204ENST00000396548 LMBRD2Q68DH5 695 aaPredicted RBP13.76□□□□□ -0.21
TRIM39-204ENST00000396548 CXorf38Q8TB03 319 aa13.76□□□□□ -0.21
TRIM39-204ENST00000396548 SH3TC2Q8TF17 1288 aa13.76□□□□□ -0.21
TRIM39-204ENST00000396548 DESI2Q9BSY9 194 aa13.76□□□□□ -0.21
TRIM39-204ENST00000396548 SYT11Q9BT88 431 aa13.76□□□□□ -0.21
TRIM39-204ENST00000396548 TCHPQ9BT92 498 aa13.76□□□□□ -0.21
TRIM39-204ENST00000396548 EPN1Q9Y6I3 576 aaPredicted RBP13.76□□□□□ -0.21
TRIM39-204ENST00000396548 A0A0U1RQJ8 604 aa13.75□□□□□ -0.21
TRIM39-204ENST00000396548 SSU72P8A0A1W2PR75 194 aa13.75□□□□□ -0.21
TRIM39-204ENST00000396548 EIF3CLB5ME19 914 aaKnown RBP13.75□□□□□ -0.21
TRIM39-204ENST00000396548 SERPING1P05155 500 aa13.75□□□□□ -0.21
TRIM39-204ENST00000396548 STAG3L1P0CL83 205 aa13.75□□□□□ -0.21
TRIM39-204ENST00000396548 AXLP30530 894 aa13.75□□□□□ -0.21
TRIM39-204ENST00000396548 ITGA7Q13683 1181 aa13.75□□□□□ -0.21
TRIM39-204ENST00000396548 EFCAB13Q8IY85 973 aa13.75□□□□□ -0.21
TRIM39-204ENST00000396548 ATRIPQ8WXE1 791 aa13.75□□□□□ -0.21
TRIM39-204ENST00000396548 KREMEN1Q96MU8 473 aa13.75□□□□□ -0.21
TRIM39-204ENST00000396548 EIF3CQ99613 913 aaKnown RBP13.75□□□□□ -0.21
TRIM39-204ENST00000396548 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.75□□□□□ -0.21
TRIM39-204ENST00000396548 NENFQ9UMX5 172 aa13.75□□□□□ -0.21
TRIM39-204ENST00000396548 PHF24Q9UPV7 400 aa13.75□□□□□ -0.21
TRIM39-204ENST00000396548 CITO14578 2027 aa13.75□□□□□ -0.21
TRIM39-204ENST00000396548 ZC3H11AO75152 810 aaKnown RBP eCLIP13.75□□□□□ -0.21
TRIM39-204ENST00000396548 ERLIN2O94905 339 aa13.75□□□□□ -0.21
TRIM39-204ENST00000396548 CLTAP09496 248 aa13.75□□□□□ -0.21
TRIM39-204ENST00000396548 AP3M2P53677 418 aa13.75□□□□□ -0.21
TRIM39-204ENST00000396548 CETN1Q12798 172 aa13.75□□□□□ -0.21
TRIM39-204ENST00000396548 KYAT1Q16773 422 aa13.75□□□□□ -0.21
TRIM39-204ENST00000396548 UBXN11Q5T124 520 aa13.75□□□□□ -0.21
TRIM39-204ENST00000396548 THNSL1Q8IYQ7 743 aa13.75□□□□□ -0.21
TRIM39-204ENST00000396548 ZNHIT6Q9NWK9 470 aaKnown RBP13.75□□□□□ -0.21
TRIM39-204ENST00000396548 GRM5P41594 1212 aa13.75□□□□□ -0.21
TRIM39-204ENST00000396548 SURF1Q15526 300 aa13.75□□□□□ -0.21
TRIM39-204ENST00000396548 SLC10A6Q3KNW5 377 aa13.75□□□□□ -0.21
TRIM39-204ENST00000396548 DCAF4L1Q3SXM0 396 aa13.75□□□□□ -0.21
TRIM39-204ENST00000396548 FAM26DQ5JW98 314 aa13.75□□□□□ -0.21
TRIM39-204ENST00000396548 ZNF662Q6ZS27 426 aa13.75□□□□□ -0.21
TRIM39-204ENST00000396548 FAM228AQ86W67 206 aa13.75□□□□□ -0.21
TRIM39-204ENST00000396548 ACRBPQ8NEB7 543 aa13.75□□□□□ -0.21
TRIM39-204ENST00000396548 FNBP1Q96RU3 617 aa13.75□□□□□ -0.21
TRIM39-204ENST00000396548 TRMT1Q9NXH9 659 aaKnown RBP13.75□□□□□ -0.21
TRIM39-204ENST00000396548 A0A1W2PQ45 241 aaPredicted RBP13.74□□□□□ -0.21
TRIM39-204ENST00000396548 A0A1W2PQY0 241 aa13.74□□□□□ -0.21
TRIM39-204ENST00000396548 IL18RAPO95256 599 aa13.74□□□□□ -0.21
TRIM39-204ENST00000396548 CXCL8P10145 99 aa13.74□□□□□ -0.21
TRIM39-204ENST00000396548 SOX5P35711 763 aa13.74□□□□□ -0.21
TRIM39-204ENST00000396548 EIF4A3P38919 411 aaKnown RBP13.74□□□□□ -0.21
TRIM39-204ENST00000396548 DRAP1Q14919 205 aaPredicted RBP13.74□□□□□ -0.21
TRIM39-204ENST00000396548 TSR1Q2NL82 804 aaKnown RBP13.74□□□□□ -0.21
TRIM39-204ENST00000396548 SLC27A1Q6PCB7 646 aa13.74□□□□□ -0.21
TRIM39-204ENST00000396548 ALKAL1Q6UXT8 129 aa13.74□□□□□ -0.21
TRIM39-204ENST00000396548 EIF2AQ9BY44 585 aaKnown RBP13.74□□□□□ -0.21
TRIM39-204ENST00000396548 UNC93B1Q9H1C4 597 aa13.74□□□□□ -0.21
TRIM39-204ENST00000396548 TRPV2Q9Y5S1 764 aa13.74□□□□□ -0.21
TRIM39-204ENST00000396548 CDY2AQ9Y6F7 541 aa13.74□□□□□ -0.21
TRIM39-204ENST00000396548 RPLP2P05387 115 aaKnown RBP13.74□□□□□ -0.21
TRIM39-204ENST00000396548 TNNI1P19237 187 aa13.74□□□□□ -0.21
TRIM39-204ENST00000396548 C1QTNF8P60827 252 aa13.74□□□□□ -0.21
TRIM39-204ENST00000396548 PTK7Q13308 1070 aa13.74□□□□□ -0.21
TRIM39-204ENST00000396548 PTGISQ16647 500 aa13.74□□□□□ -0.21
TRIM39-204ENST00000396548 KAT5Q92993 513 aa13.74□□□□□ -0.21
TRIM39-204ENST00000396548 SCLT1Q96NL6 688 aa13.74□□□□□ -0.21
TRIM39-204ENST00000396548 UBE2TQ9NPD8 197 aaPredicted RBP13.74□□□□□ -0.21
TRIM39-204ENST00000396548 NOC2LQ9Y3T9 749 aaKnown RBP13.74□□□□□ -0.21
TRIM39-204ENST00000396548 TRIP11Q15643 1979 aa13.74□□□□□ -0.21
TRIM39-204ENST00000396548 LACTBL1A8MY62 500 aa13.73□□□□□ -0.21
TRIM39-204ENST00000396548 HLA-DRAP01903 254 aa13.73□□□□□ -0.21
TRIM39-204ENST00000396548 PNMA6AP0CW24 399 aaPredicted RBP13.73□□□□□ -0.21
TRIM39-204ENST00000396548 ARHGAP25P42331 645 aa13.73□□□□□ -0.21
TRIM39-204ENST00000396548 RAPGEF1Q13905 1077 aa13.73□□□□□ -0.21
TRIM39-204ENST00000396548 TRAF7Q6Q0C0 670 aa13.73□□□□□ -0.21
TRIM39-204ENST00000396548 CATSPER4Q7RTX7 472 aa13.73□□□□□ -0.21
TRIM39-204ENST00000396548 TATDN2Q93075 761 aa13.73□□□□□ -0.21
TRIM39-204ENST00000396548 OSBPL7Q9BZF2 842 aa13.73□□□□□ -0.21
TRIM39-204ENST00000396548 APOBEC3GQ9HC16 384 aaKnown RBP13.73□□□□□ -0.21
TRIM39-204ENST00000396548 FOXN3O00409 490 aaPredicted RBP13.73□□□□□ -0.21
TRIM39-204ENST00000396548 ZSCAN12O43309 604 aa13.73□□□□□ -0.21
TRIM39-204ENST00000396548 CST3P01034 146 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms