RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 TMCO2Q7Z6W1 182 aaPredicted RBP23.16■■□□□ 1.3
FXN-202ENST00000396364 NT5DC4Q86YG4 428 aa23.16■■□□□ 1.3
FXN-202ENST00000396364 FAM212AQ96EL1 285 aa23.16■■□□□ 1.3
FXN-202ENST00000396364 SNX27Q96L92 541 aa23.16■■□□□ 1.3
FXN-202ENST00000396364 FBXL18Q96ME1 805 aa23.16■■□□□ 1.3
FXN-202ENST00000396364 CASD1Q96PB1 797 aa23.16■■□□□ 1.3
FXN-202ENST00000396364 AAASQ9NRG9 546 aa23.16■■□□□ 1.3
FXN-202ENST00000396364 DMAC2Q9NW81 257 aa23.16■■□□□ 1.3
FXN-202ENST00000396364 KLK14Q9P0G3 267 aa23.16■■□□□ 1.3
FXN-202ENST00000396364 RWDD3Q9Y3V2 267 aa23.16■■□□□ 1.3
FXN-202ENST00000396364 TDRD15B5MCY1 1934 aaKnown RBP23.16■■□□□ 1.3
FXN-202ENST00000396364 SYCE3A1L190 88 aa23.15■■□□□ 1.3
FXN-202ENST00000396364 GOLGA8IPA6NC78 632 aa23.15■■□□□ 1.3
FXN-202ENST00000396364 GOLGA8JA6NMD2 632 aa23.15■■□□□ 1.3
FXN-202ENST00000396364 MEIS3P2A8K0S8 358 aa23.15■■□□□ 1.3
FXN-202ENST00000396364 MAPK13O15264 365 aa23.15■■□□□ 1.3
FXN-202ENST00000396364 EPB41P11171 864 aaKnown RBP23.15■■□□□ 1.3
FXN-202ENST00000396364 PSMC2P35998 433 aaKnown RBP23.15■■□□□ 1.3
FXN-202ENST00000396364 ZSCAN23Q3MJ62 389 aa23.15■■□□□ 1.3
FXN-202ENST00000396364 PAN2Q504Q3 1202 aaKnown RBP23.15■■□□□ 1.3
FXN-202ENST00000396364 SPOUT1Q5T280 376 aaKnown RBP23.15■■□□□ 1.3
FXN-202ENST00000396364 BRSK2Q8IWQ3 736 aa23.15■■□□□ 1.3
FXN-202ENST00000396364 CSGALNACT2Q8N6G5 542 aa23.15■■□□□ 1.3
FXN-202ENST00000396364 CEP63Q96MT8 703 aa23.15■■□□□ 1.3
FXN-202ENST00000396364 FNBP1Q96RU3 617 aa23.15■■□□□ 1.3
FXN-202ENST00000396364 MKNK1Q9BUB5 465 aa23.15■■□□□ 1.3
FXN-202ENST00000396364 CNTN3Q9P232 1028 aa23.15■■□□□ 1.3
FXN-202ENST00000396364 DERAQ9Y315 318 aa23.15■■□□□ 1.3
FXN-202ENST00000396364 TULP1O00294 542 aaPredicted RBP23.14■■□□□ 1.29
FXN-202ENST00000396364 KRT13P13646 458 aa23.14■■□□□ 1.29
FXN-202ENST00000396364 KCNE1P15382 129 aa23.14■■□□□ 1.29
FXN-202ENST00000396364 ENOX2Q16206 610 aaKnown RBP23.14■■□□□ 1.29
FXN-202ENST00000396364 SLC10A6Q3KNW5 377 aa23.14■■□□□ 1.29
FXN-202ENST00000396364 TMEM192Q8IY95 271 aa23.14■■□□□ 1.29
FXN-202ENST00000396364 RDH13Q8NBN7 331 aa23.14■■□□□ 1.29
FXN-202ENST00000396364 ZFP42Q96MM3 310 aa23.14■■□□□ 1.29
FXN-202ENST00000396364 RC3H2Q9HBD1 1191 aaKnown RBP23.14■■□□□ 1.29
FXN-202ENST00000396364 RNF19AQ9NV58 838 aa23.14■■□□□ 1.29
FXN-202ENST00000396364 TTC26A0AVF1 554 aa23.13■■□□□ 1.29
FXN-202ENST00000396364 TRIM49BA6NDI0 452 aa23.13■■□□□ 1.29
FXN-202ENST00000396364 SLC16A3O15427 465 aaKnown RBP23.13■■□□□ 1.29
FXN-202ENST00000396364 CAVIN2O95810 425 aa23.13■■□□□ 1.29
FXN-202ENST00000396364 GNA14O95837 355 aa23.13■■□□□ 1.29
FXN-202ENST00000396364 POMCP01189 267 aa23.13■■□□□ 1.29
FXN-202ENST00000396364 SCNN1GP51170 649 aa23.13■■□□□ 1.29
FXN-202ENST00000396364 RABGGTBP53611 331 aa23.13■■□□□ 1.29
FXN-202ENST00000396364 STX17P56962 302 aa23.13■■□□□ 1.29
FXN-202ENST00000396364 XKR4Q5GH76 650 aa23.13■■□□□ 1.29
FXN-202ENST00000396364 ZBTB41Q5SVQ8 909 aa23.13■■□□□ 1.29
FXN-202ENST00000396364 TTI2Q6NXR4 508 aa23.13■■□□□ 1.29
FXN-202ENST00000396364 CRELD2Q6UXH1 353 aaPredicted RBP23.13■■□□□ 1.29
FXN-202ENST00000396364 ALKAL1Q6UXT8 129 aa23.13■■□□□ 1.29
FXN-202ENST00000396364 INTS8Q75QN2 995 aaKnown RBP23.13■■□□□ 1.29
FXN-202ENST00000396364 SP7Q8TDD2 431 aaPredicted RBP23.13■■□□□ 1.29
FXN-202ENST00000396364 CACTINQ8WUQ7 758 aaKnown RBP23.13■■□□□ 1.29
FXN-202ENST00000396364 SAMD11Q96NU1 681 aa23.13■■□□□ 1.29
FXN-202ENST00000396364 ANP32EQ9BTT0 268 aa23.13■■□□□ 1.29
FXN-202ENST00000396364 TBC1D13Q9NVG8 400 aa23.13■■□□□ 1.29
FXN-202ENST00000396364 GRXCR1A8MXD5 290 aa23.12■■□□□ 1.29
FXN-202ENST00000396364 LACTBL1A8MY62 500 aa23.12■■□□□ 1.29
FXN-202ENST00000396364 RBAK-RBAKDNI3L0D1 243 aa23.12■■□□□ 1.29
FXN-202ENST00000396364 ADRB2P07550 413 aa23.12■■□□□ 1.29
FXN-202ENST00000396364 LAG3P18627 525 aa23.12■■□□□ 1.29
FXN-202ENST00000396364 GATMP50440 423 aa23.12■■□□□ 1.29
FXN-202ENST00000396364 CBWD2Q8IUF1 395 aa23.12■■□□□ 1.29
FXN-202ENST00000396364 FAM186BQ8IYM0 893 aa23.12■■□□□ 1.29
FXN-202ENST00000396364 GBF1Q92538 1859 aa23.12■■□□□ 1.29
FXN-202ENST00000396364 KIF12Q96FN5 646 aa23.12■■□□□ 1.29
FXN-202ENST00000396364 PBX4Q9BYU1 374 aa23.12■■□□□ 1.29
FXN-202ENST00000396364 SLC28A3Q9HAS3 691 aa23.12■■□□□ 1.29
FXN-202ENST00000396364 METTL14Q9HCE5 456 aaKnown RBP23.12■■□□□ 1.29
FXN-202ENST00000396364 UBQLN1Q9UMX0 589 aaKnown RBP23.12■■□□□ 1.29
FXN-202ENST00000396364 C2CD2Q9Y426 696 aa23.12■■□□□ 1.29
FXN-202ENST00000396364 SMIM28A0A1B0GU29 152 aa23.11■■□□□ 1.29
FXN-202ENST00000396364 PMS1P54277 932 aaKnown RBP23.11■■□□□ 1.29
FXN-202ENST00000396364 ENPEPQ07075 957 aa23.11■■□□□ 1.29
FXN-202ENST00000396364 CYP24A1Q07973 514 aa23.11■■□□□ 1.29
FXN-202ENST00000396364 TUSC3Q13454 348 aa23.11■■□□□ 1.29
FXN-202ENST00000396364 TMEM132DQ14C87 1099 aa23.11■■□□□ 1.29
FXN-202ENST00000396364 FAM109BQ6ICB4 259 aaPredicted RBP23.11■■□□□ 1.29
FXN-202ENST00000396364 FILIP1Q7Z7B0 1213 aa23.11■■□□□ 1.29
FXN-202ENST00000396364 FAM114A1Q8IWE2 563 aa23.11■■□□□ 1.29
FXN-202ENST00000396364 UROC1Q96N76 676 aa23.11■■□□□ 1.29
FXN-202ENST00000396364 TMEM175Q9BSA9 504 aa23.11■■□□□ 1.29
FXN-202ENST00000396364 R3HCC1Q9Y3T6 440 aaKnown RBP23.11■■□□□ 1.29
FXN-202ENST00000396364 ALDH7A1P49419 539 aaKnown RBP23.1■■□□□ 1.29
FXN-202ENST00000396364 AP3M2P53677 418 aa23.1■■□□□ 1.29
FXN-202ENST00000396364 PSMD6Q15008 389 aa23.1■■□□□ 1.29
FXN-202ENST00000396364 CCDC40Q4G0X9 1142 aa23.1■■□□□ 1.29
FXN-202ENST00000396364 ZC3H3Q8IXZ2 948 aaKnown RBP23.1■■□□□ 1.29
FXN-202ENST00000396364 BEST2Q8NFU1 509 aa23.1■■□□□ 1.29
FXN-202ENST00000396364 MFSD14AQ96MC6 490 aa23.1■■□□□ 1.29
FXN-202ENST00000396364 DNAJC25Q9H1X3 360 aa23.1■■□□□ 1.29
FXN-202ENST00000396364 PCDHB12Q9Y5F1 795 aa23.1■■□□□ 1.29
FXN-202ENST00000396364 PDCD11Q14690 1871 aaKnown RBP23.1■■□□□ 1.29
FXN-202ENST00000396364 TRIP11Q15643 1979 aa23.1■■□□□ 1.29
FXN-202ENST00000396364 ANK1P16157 1881 aa23.09■■□□□ 1.29
FXN-202ENST00000396364 PTGESO14684 152 aa23.09■■□□□ 1.29
FXN-202ENST00000396364 STX10O60499 249 aa23.09■■□□□ 1.29
FXN-202ENST00000396364 ZC3H11AO75152 810 aaKnown RBP eCLIP23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms