RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 DMGDHQ9UI17 866 aaKnown RBP5.77□□□□□ -1.49
VPS41-203ENST00000395969 TBX20Q9UMR3 447 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 DERAQ9Y315 318 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 RPS6KL1Q9Y6S9 549 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 C5orf60A6NFR6 353 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 SLC15A5A6NIM6 579 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 ZNF233A6NK53 670 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 TMEM88BA6NKF7 163 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 ZNF185O15231 689 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 DNAJC8O75937 253 aaPredicted RBP5.77□□□□□ -1.49
VPS41-203ENST00000395969 OATP04181 439 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 CDH5P33151 784 aaPredicted RBP5.77□□□□□ -1.49
VPS41-203ENST00000395969 KRT9P35527 623 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 FMO5P49326 533 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 ACTR2P61160 394 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 GUCY1A3Q02108 690 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 BFSP1Q12934 665 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 PTP4A2Q12974 167 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 IFT88Q13099 833 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 ADAM9Q13443 819 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 FAM110CQ1W6H9 321 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 SPRED3Q2MJR0 410 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 GLE1Q53GS7 698 aaKnown RBP5.77□□□□□ -1.49
VPS41-203ENST00000395969 HERC4Q5GLZ8 1057 aaPredicted RBP5.77□□□□□ -1.49
VPS41-203ENST00000395969 ZNF484Q5JVG2 852 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 ZFYVE27Q5T4F4 411 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 RNF187Q5TA31 235 aaPredicted RBP5.77□□□□□ -1.49
VPS41-203ENST00000395969 TAS1R3Q7RTX0 852 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 LIMS2Q7Z4I7 341 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 SESTD1Q86VW0 696 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 SPICE1Q8N0Z3 855 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 ANKRD35Q8N283 1001 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 RASGEF1CQ8N431 466 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 SH2D3CQ8N5H7 860 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 RASSF8Q8NHQ8 419 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 PPTC7Q8NI37 304 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 HDAC7Q8WUI4 952 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 AFG1LQ8WV93 481 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 TCP11Q8WWU5 503 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 ITFG2Q969R8 447 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 CYFIP2Q96F07 1278 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 CAPZA3Q96KX2 299 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 LRRC1Q9BTT6 524 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 UPF3AQ9H1J1 476 aaKnown RBP5.77□□□□□ -1.49
VPS41-203ENST00000395969 PIF1Q9H611 641 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 NHEJ1Q9H9Q4 299 aaPredicted RBP5.77□□□□□ -1.49
VPS41-203ENST00000395969 KIF9Q9HAQ2 790 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 SPATS2LQ9NUQ6 558 aaKnown RBP5.77□□□□□ -1.49
VPS41-203ENST00000395969 SCN10AQ9Y5Y9 1956 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 ZNF263O14978 683 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 LDHAP00338 332 aaKnown RBP5.77□□□□□ -1.49
VPS41-203ENST00000395969 NR1D1P20393 614 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 ZNF76P36508 570 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 SSR1P43307 286 aaKnown RBP5.77□□□□□ -1.49
VPS41-203ENST00000395969 ATP1A2P50993 1020 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 ZNF132P52740 706 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 MCL1Q07820 350 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 KCNH2Q12809 1159 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 SURF1Q15526 300 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 TREML2Q5T2D2 321 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 IER5Q5VY09 327 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 FAM160B1Q5W0V3 765 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 CCDC70Q6NSX1 233 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 TAPT1Q6NXT6 567 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 CCDC174Q6PII3 467 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 CRELD2Q6UXH1 353 aaPredicted RBP5.77□□□□□ -1.49
VPS41-203ENST00000395969 FAM71AQ8IYT1 594 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 LRRC57Q8N9N7 239 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 TRIM58Q8NG06 486 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 P3H4Q92791 437 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 GPR20Q99678 358 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 C2orf40Q9H1Z8 148 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 TMEM8AQ9HCN3 771 aa5.77□□□□□ -1.49
VPS41-203ENST00000395969 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.77□□□□□ -1.49
VPS41-203ENST00000395969 ARHGEF35A5YM69 484 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 HAS3O00219 553 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 EXTL3O43909 919 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 ATP9AO75110 1047 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 FAM13AO94988 1023 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 KRT14P02533 472 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 GHRP10912 638 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 XRCC5P13010 732 aaKnown RBP5.76□□□□□ -1.49
VPS41-203ENST00000395969 UCHL3P15374 230 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 NR2F2P24468 414 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 SEC24CP53992 1094 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 HMGCS2P54868 508 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 ADAM17P78536 824 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 BYSLQ13895 437 aaKnown RBP5.76□□□□□ -1.49
VPS41-203ENST00000395969 MXD4Q14582 209 aaPredicted RBP5.76□□□□□ -1.49
VPS41-203ENST00000395969 UGCGQ16739 394 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 XKR4Q5GH76 650 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 CCDC122Q5T0U0 273 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 AP1ARQ63HQ0 302 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 C11orf63Q6NUN7 778 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 SLC39A4Q6P5W5 647 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 TSHZ1Q6ZSZ6 1077 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 CCDC121Q6ZUS5 278 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 USP37Q86T82 979 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 PARD3BQ8TEW8 1205 aa5.76□□□□□ -1.49
VPS41-203ENST00000395969 PSPC1Q8WXF1 523 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms