RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 GRM5P41594 1212 aa22.1■■□□□ 1.13
VCPKMT-202ENST00000395860 CCZ1BP86790 482 aa22.1■■□□□ 1.13
VCPKMT-202ENST00000395860 CCZ1P86791 482 aaPredicted RBP22.1■■□□□ 1.13
VCPKMT-202ENST00000395860 POU5F1Q01860 360 aaKnown RBP22.1■■□□□ 1.13
VCPKMT-202ENST00000395860 NFX1Q12986 1120 aaKnown RBP22.1■■□□□ 1.13
VCPKMT-202ENST00000395860 ZNF618Q5T7W0 954 aa22.1■■□□□ 1.13
VCPKMT-202ENST00000395860 KLHDC7AQ5VTJ3 777 aa22.1■■□□□ 1.13
VCPKMT-202ENST00000395860 WDR49Q8IV35 697 aa22.1■■□□□ 1.13
VCPKMT-202ENST00000395860 ACAP3Q96P50 834 aa22.1■■□□□ 1.13
VCPKMT-202ENST00000395860 CCDC94Q9BW85 323 aaPredicted RBP22.1■■□□□ 1.13
VCPKMT-202ENST00000395860 EIF2AQ9BY44 585 aaKnown RBP22.1■■□□□ 1.13
VCPKMT-202ENST00000395860 GANQ9H2C0 597 aa22.1■■□□□ 1.13
VCPKMT-202ENST00000395860 SIX2Q9NPC8 291 aa22.1■■□□□ 1.13
VCPKMT-202ENST00000395860 NLRC4Q9NPP4 1024 aa22.1■■□□□ 1.13
VCPKMT-202ENST00000395860 ST3GAL5Q9UNP4 418 aa22.1■■□□□ 1.13
VCPKMT-202ENST00000395860 ZKSCAN5Q9Y2L8 839 aa22.1■■□□□ 1.13
VCPKMT-202ENST00000395860 PTPRJQ12913 1337 aa22.1■■□□□ 1.13
VCPKMT-202ENST00000395860 GPR182O15218 404 aa22.1■■□□□ 1.13
VCPKMT-202ENST00000395860 CKBP12277 381 aa22.1■■□□□ 1.13
VCPKMT-202ENST00000395860 SKILP12757 684 aa22.1■■□□□ 1.13
VCPKMT-202ENST00000395860 TSR1Q2NL82 804 aaKnown RBP22.1■■□□□ 1.13
VCPKMT-202ENST00000395860 DPY19L2P1Q6NXN4 242 aa22.1■■□□□ 1.13
VCPKMT-202ENST00000395860 FBXL13Q8NEE6 735 aa22.1■■□□□ 1.13
VCPKMT-202ENST00000395860 OR8K1Q8NGG5 319 aa22.1■■□□□ 1.13
VCPKMT-202ENST00000395860 BAG1Q99933 345 aaPredicted RBP22.1■■□□□ 1.13
VCPKMT-202ENST00000395860 MROH7Q68CQ1 1323 aa22.09■■□□□ 1.13
VCPKMT-202ENST00000395860 DNAH12Q6ZR08 3092 aa22.09■■□□□ 1.13
VCPKMT-202ENST00000395860 UCHL3P15374 230 aa22.09■■□□□ 1.13
VCPKMT-202ENST00000395860 AP3M2P53677 418 aa22.09■■□□□ 1.13
VCPKMT-202ENST00000395860 BIRC3Q13489 604 aa22.09■■□□□ 1.13
VCPKMT-202ENST00000395860 FBXO47Q5MNV8 452 aa22.09■■□□□ 1.13
VCPKMT-202ENST00000395860 C15orf39Q6ZRI6 1047 aa22.09■■□□□ 1.13
VCPKMT-202ENST00000395860 FAM126BQ8IXS8 530 aa22.09■■□□□ 1.13
VCPKMT-202ENST00000395860 LMO3Q8TAP4 145 aa22.09■■□□□ 1.13
VCPKMT-202ENST00000395860 DNAJC7Q99615 494 aa22.09■■□□□ 1.13
VCPKMT-202ENST00000395860 COQ4Q9Y3A0 265 aa22.09■■□□□ 1.13
VCPKMT-202ENST00000395860 C4BPAP04003 597 aaKnown RBP22.08■■□□□ 1.13
VCPKMT-202ENST00000395860 GHRP10912 638 aa22.08■■□□□ 1.13
VCPKMT-202ENST00000395860 ZACNQ401N2 412 aa22.08■■□□□ 1.13
VCPKMT-202ENST00000395860 TWF2Q6IBS0 349 aaKnown RBP22.08■■□□□ 1.13
VCPKMT-202ENST00000395860 RRAGAQ7L523 313 aa22.08■■□□□ 1.13
VCPKMT-202ENST00000395860 FAM84AQ96KN4 292 aa22.08■■□□□ 1.13
VCPKMT-202ENST00000395860 TMX1Q9H3N1 280 aa22.08■■□□□ 1.13
VCPKMT-202ENST00000395860 RAB20Q9NX57 234 aa22.08■■□□□ 1.13
VCPKMT-202ENST00000395860 FBXL5Q9UKA1 691 aa22.08■■□□□ 1.13
VCPKMT-202ENST00000395860 BRCA2P51587 3418 aa22.08■■□□□ 1.13
VCPKMT-202ENST00000395860 TRIP11Q15643 1979 aa22.08■■□□□ 1.12
VCPKMT-202ENST00000395860 LACTBL1A8MY62 500 aa22.07■■□□□ 1.12
VCPKMT-202ENST00000395860 MNX1P50219 401 aaPredicted RBP22.07■■□□□ 1.12
VCPKMT-202ENST00000395860 PAK2Q13177 524 aa22.07■■□□□ 1.12
VCPKMT-202ENST00000395860 TDRD10Q5VZ19 366 aaKnown RBP22.07■■□□□ 1.12
VCPKMT-202ENST00000395860 OR5B17Q8NGF7 314 aa22.07■■□□□ 1.12
VCPKMT-202ENST00000395860 CAGE1Q8TC20 777 aa22.07■■□□□ 1.12
VCPKMT-202ENST00000395860 TAS1R2Q8TE23 839 aa22.07■■□□□ 1.12
VCPKMT-202ENST00000395860 BAP1Q92560 729 aa22.07■■□□□ 1.12
VCPKMT-202ENST00000395860 AGO3Q9H9G7 860 aaKnown RBP22.07■■□□□ 1.12
VCPKMT-202ENST00000395860 SNTG2Q9NY99 539 aa22.07■■□□□ 1.12
VCPKMT-202ENST00000395860 APEX2Q9UBZ4 518 aa22.07■■□□□ 1.12
VCPKMT-202ENST00000395860 FHOD1Q9Y613 1164 aa22.07■■□□□ 1.12
VCPKMT-202ENST00000395860 LRRC53A6NM62 1247 aa22.07■■□□□ 1.12
VCPKMT-202ENST00000395860 GJA8P48165 433 aa22.07■■□□□ 1.12
VCPKMT-202ENST00000395860 ATN1P54259 1190 aaPredicted RBP22.07■■□□□ 1.12
VCPKMT-202ENST00000395860 LPIN1Q14693 890 aa22.07■■□□□ 1.12
VCPKMT-202ENST00000395860 SLC10A6Q3KNW5 377 aa22.07■■□□□ 1.12
VCPKMT-202ENST00000395860 UBXN11Q5T124 520 aa22.07■■□□□ 1.12
VCPKMT-202ENST00000395860 ZSCAN30Q86W11 494 aa22.07■■□□□ 1.12
VCPKMT-202ENST00000395860 TMEM139Q8IV31 216 aa22.07■■□□□ 1.12
VCPKMT-202ENST00000395860 USP38Q8NB14 1042 aa22.07■■□□□ 1.12
VCPKMT-202ENST00000395860 SEMA4DQ92854 862 aa22.07■■□□□ 1.12
VCPKMT-202ENST00000395860 NAA15Q9BXJ9 866 aaKnown RBP22.07■■□□□ 1.12
VCPKMT-202ENST00000395860 ASB7Q9H672 318 aa22.07■■□□□ 1.12
VCPKMT-202ENST00000395860 CHST12Q9NRB3 414 aa22.07■■□□□ 1.12
VCPKMT-202ENST00000395860 ZNHIT6Q9NWK9 470 aaKnown RBP22.07■■□□□ 1.12
VCPKMT-202ENST00000395860 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.07■■□□□ 1.12
VCPKMT-202ENST00000395860 SQORQ9Y6N5 450 aa22.07■■□□□ 1.12
VCPKMT-202ENST00000395860 RBAK-RBAKDNI3L0D1 243 aa22.06■■□□□ 1.12
VCPKMT-202ENST00000395860 TLR3O15455 904 aaKnown RBP22.06■■□□□ 1.12
VCPKMT-202ENST00000395860 PHACTR2O75167 634 aa22.06■■□□□ 1.12
VCPKMT-202ENST00000395860 LRRN2O75325 713 aa22.06■■□□□ 1.12
VCPKMT-202ENST00000395860 CD4P01730 458 aa22.06■■□□□ 1.12
VCPKMT-202ENST00000395860 TMEM191BP0C7N4 346 aa22.06■■□□□ 1.12
VCPKMT-202ENST00000395860 CD52P31358 61 aa22.06■■□□□ 1.12
VCPKMT-202ENST00000395860 PIK3CAP42336 1068 aa22.06■■□□□ 1.12
VCPKMT-202ENST00000395860 YARSP54577 528 aaKnown RBP22.06■■□□□ 1.12
VCPKMT-202ENST00000395860 TFAMQ00059 246 aaKnown RBP22.06■■□□□ 1.12
VCPKMT-202ENST00000395860 DUOXA2Q1HG44 320 aa22.06■■□□□ 1.12
VCPKMT-202ENST00000395860 PDXDC1Q6P996 788 aa22.06■■□□□ 1.12
VCPKMT-202ENST00000395860 GJB7Q6PEY0 223 aa22.06■■□□□ 1.12
VCPKMT-202ENST00000395860 SLC39A5Q6ZMH5 540 aa22.06■■□□□ 1.12
VCPKMT-202ENST00000395860 SPAG5Q96R06 1193 aa22.06■■□□□ 1.12
VCPKMT-202ENST00000395860 OSBPL7Q9BZF2 842 aa22.06■■□□□ 1.12
VCPKMT-202ENST00000395860 NUCKS1Q9H1E3 243 aaKnown RBP22.06■■□□□ 1.12
VCPKMT-202ENST00000395860 NXF3Q9H4D5 531 aaKnown RBP22.06■■□□□ 1.12
VCPKMT-202ENST00000395860 ERVK-5Q9HDB9 667 aa22.06■■□□□ 1.12
VCPKMT-202ENST00000395860 PADI3Q9ULW8 664 aa22.06■■□□□ 1.12
VCPKMT-202ENST00000395860 DAAM1Q9Y4D1 1078 aa22.06■■□□□ 1.12
VCPKMT-202ENST00000395860 HES2Q9Y543 173 aa22.06■■□□□ 1.12
VCPKMT-202ENST00000395860 PDCD11Q14690 1871 aaKnown RBP22.05■■□□□ 1.12
VCPKMT-202ENST00000395860 PQBP1O60828 265 aaKnown RBP22.05■■□□□ 1.12
VCPKMT-202ENST00000395860 ZSCAN20P17040 1043 aaPredicted RBP22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms