RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 UNC45AQ9H3U1 944 aa15.31■□□□□ 0.04
VCPKMT-201ENST00000395859 RBM12Q9NTZ6 932 aaKnown RBP15.31■□□□□ 0.04
VCPKMT-201ENST00000395859 SEPT9Q9UHD8 586 aaPredicted RBP15.31■□□□□ 0.04
VCPKMT-201ENST00000395859 GIT1Q9Y2X7 761 aa15.31■□□□□ 0.04
VCPKMT-201ENST00000395859 HES2Q9Y543 173 aa15.31■□□□□ 0.04
VCPKMT-201ENST00000395859 COL4A3BPQ9Y5P4 624 aa15.31■□□□□ 0.04
VCPKMT-201ENST00000395859 NCANO14594 1321 aa15.31■□□□□ 0.04
VCPKMT-201ENST00000395859 ZMYM2Q9UBW7 1377 aa15.31■□□□□ 0.04
VCPKMT-201ENST00000395859 CCDC69A6NI79 296 aa15.3■□□□□ 0.04
VCPKMT-201ENST00000395859 SF3B1O75533 1304 aaKnown RBP eCLIP15.3■□□□□ 0.04
VCPKMT-201ENST00000395859 ZIC2O95409 532 aaPredicted RBP15.3■□□□□ 0.04
VCPKMT-201ENST00000395859 JAK3P52333 1124 aa15.3■□□□□ 0.04
VCPKMT-201ENST00000395859 EML5Q05BV3 1969 aa15.3■□□□□ 0.04
VCPKMT-201ENST00000395859 RNF43Q68DV7 783 aa15.3■□□□□ 0.04
VCPKMT-201ENST00000395859 VITQ6UXI7 678 aa15.3■□□□□ 0.04
VCPKMT-201ENST00000395859 ANO5Q75V66 913 aa15.3■□□□□ 0.04
VCPKMT-201ENST00000395859 KBTBD6Q86V97 674 aa15.3■□□□□ 0.04
VCPKMT-201ENST00000395859 SGMS1Q86VZ5 419 aa15.3■□□□□ 0.04
VCPKMT-201ENST00000395859 RABGGTAQ92696 567 aa15.3■□□□□ 0.04
VCPKMT-201ENST00000395859 SLC5A5Q92911 643 aa15.3■□□□□ 0.04
VCPKMT-201ENST00000395859 ZC3H10Q96K80 434 aaKnown RBP15.3■□□□□ 0.04
VCPKMT-201ENST00000395859 ASB16Q96NS5 453 aa15.3■□□□□ 0.04
VCPKMT-201ENST00000395859 RIT2Q99578 217 aa15.3■□□□□ 0.04
VCPKMT-201ENST00000395859 CACNG4Q9UBN1 327 aa15.3■□□□□ 0.04
VCPKMT-201ENST00000395859 TCEAL9Q9UHQ7 104 aa15.3■□□□□ 0.04
VCPKMT-201ENST00000395859 CACNA1EQ15878 2313 aa15.29■□□□□ 0.04
VCPKMT-201ENST00000395859 MICAL2O94851 1124 aa15.29■□□□□ 0.04
VCPKMT-201ENST00000395859 CCNE1P24864 410 aa15.29■□□□□ 0.04
VCPKMT-201ENST00000395859 HSP90AA2PQ14568 343 aaPredicted RBP15.29■□□□□ 0.04
VCPKMT-201ENST00000395859 TCEAL6Q6IPX3 200 aa15.29■□□□□ 0.04
VCPKMT-201ENST00000395859 CASC1Q6TDU7 716 aa15.29■□□□□ 0.04
VCPKMT-201ENST00000395859 PPP4R3CPQ6ZMV5 832 aa15.29■□□□□ 0.04
VCPKMT-201ENST00000395859 NFXL1Q6ZNB6 911 aa15.29■□□□□ 0.04
VCPKMT-201ENST00000395859 CACNA2D4Q7Z3S7 1137 aa15.29■□□□□ 0.04
VCPKMT-201ENST00000395859 RDM1Q8NG50 284 aa15.29■□□□□ 0.04
VCPKMT-201ENST00000395859 EXOC6Q8TAG9 804 aa15.29■□□□□ 0.04
VCPKMT-201ENST00000395859 TCEAL3Q969E4 200 aa15.29■□□□□ 0.04
VCPKMT-201ENST00000395859 CCDC51Q96ER9 411 aa15.29■□□□□ 0.04
VCPKMT-201ENST00000395859 ZFP14Q9HCL3 533 aa15.29■□□□□ 0.04
VCPKMT-201ENST00000395859 VPS45Q9NRW7 570 aa15.29■□□□□ 0.04
VCPKMT-201ENST00000395859 PDCD11Q14690 1871 aaKnown RBP15.29■□□□□ 0.04
VCPKMT-201ENST00000395859 PCNX2A6NKB5 2137 aa15.28■□□□□ 0.04
VCPKMT-201ENST00000395859 TENM4Q6N022 2769 aa15.28■□□□□ 0.04
VCPKMT-201ENST00000395859 CCDC163A0A0D9SF12 145 aa15.28■□□□□ 0.04
VCPKMT-201ENST00000395859 TSPAN1O60635 241 aa15.28■□□□□ 0.04
VCPKMT-201ENST00000395859 PSMD10O75832 226 aa15.28■□□□□ 0.04
VCPKMT-201ENST00000395859 CEACAM1P13688 526 aa15.28■□□□□ 0.04
VCPKMT-201ENST00000395859 PSMC3P17980 439 aa15.28■□□□□ 0.04
VCPKMT-201ENST00000395859 GDI1P31150 447 aa15.28■□□□□ 0.04
VCPKMT-201ENST00000395859 MPLP40238 635 aa15.28■□□□□ 0.04
VCPKMT-201ENST00000395859 GRIK3Q13003 919 aa15.28■□□□□ 0.04
VCPKMT-201ENST00000395859 LRRC32Q14392 662 aa15.28■□□□□ 0.04
VCPKMT-201ENST00000395859 PRPF31Q8WWY3 499 aaKnown RBP15.28■□□□□ 0.04
VCPKMT-201ENST00000395859 TCEAL4Q96EI5 215 aa15.28■□□□□ 0.04
VCPKMT-201ENST00000395859 MSANTD3Q96H12 275 aa15.28■□□□□ 0.04
VCPKMT-201ENST00000395859 NXF3Q9H4D5 531 aaKnown RBP15.28■□□□□ 0.04
VCPKMT-201ENST00000395859 TRPV4Q9HBA0 871 aa15.28■□□□□ 0.04
VCPKMT-201ENST00000395859 GPSM3Q9Y4H4 160 aa15.28■□□□□ 0.04
VCPKMT-201ENST00000395859 NEUROG3Q9Y4Z2 214 aa15.28■□□□□ 0.04
VCPKMT-201ENST00000395859 SLC12A7Q9Y666 1083 aa15.28■□□□□ 0.04
VCPKMT-201ENST00000395859 V9GY48 417 aaPredicted RBP15.28■□□□□ 0.04
VCPKMT-201ENST00000395859 ASCC3Q8N3C0 2202 aaKnown RBP15.27■□□□□ 0.04
VCPKMT-201ENST00000395859 ESYT2A0FGR8 921 aa15.27■□□□□ 0.04
VCPKMT-201ENST00000395859 ARHGEF37A1IGU5 675 aa15.27■□□□□ 0.04
VCPKMT-201ENST00000395859 WDR27A2RRH5 827 aa15.27■□□□□ 0.04
VCPKMT-201ENST00000395859 CHMP2AO43633 222 aa15.27■□□□□ 0.04
VCPKMT-201ENST00000395859 MOSPD3O75425 235 aa15.27■□□□□ 0.04
VCPKMT-201ENST00000395859 TADA2AO75478 443 aa15.27■□□□□ 0.04
VCPKMT-201ENST00000395859 AKAP3O75969 853 aa15.27■□□□□ 0.04
VCPKMT-201ENST00000395859 KIF4AO95239 1232 aa15.27■□□□□ 0.04
VCPKMT-201ENST00000395859 CSRP1P21291 193 aaKnown RBP15.27■□□□□ 0.04
VCPKMT-201ENST00000395859 MCM5P33992 734 aa15.27■□□□□ 0.04
VCPKMT-201ENST00000395859 CCR2P41597 374 aa15.27■□□□□ 0.04
VCPKMT-201ENST00000395859 CCINQ13939 588 aa15.27■□□□□ 0.04
VCPKMT-201ENST00000395859 PCBP1Q15365 356 aaKnown RBP eCLIP15.27■□□□□ 0.04
VCPKMT-201ENST00000395859 AMHR2Q16671 573 aa15.27■□□□□ 0.04
VCPKMT-201ENST00000395859 SH3PXD2AQ5TCZ1 1133 aa15.27■□□□□ 0.04
VCPKMT-201ENST00000395859 FAM171A1Q5VUB5 890 aa15.27■□□□□ 0.04
VCPKMT-201ENST00000395859 TXNDC11Q6PKC3 985 aa15.27■□□□□ 0.04
VCPKMT-201ENST00000395859 CHD1LQ86WJ1 897 aa15.27■□□□□ 0.04
VCPKMT-201ENST00000395859 GJA10Q969M2 543 aa15.27■□□□□ 0.04
VCPKMT-201ENST00000395859 ZSWIM3Q96MP5 696 aa15.27■□□□□ 0.04
VCPKMT-201ENST00000395859 ZMYND12Q9H0C1 365 aa15.27■□□□□ 0.04
VCPKMT-201ENST00000395859 CSRNP2Q9H175 543 aa15.27■□□□□ 0.04
VCPKMT-201ENST00000395859 DHX33Q9H6R0 707 aaKnown RBP15.27■□□□□ 0.04
VCPKMT-201ENST00000395859 CFAP46Q8IYW2 2715 aa15.26■□□□□ 0.03
VCPKMT-201ENST00000395859 C4orf47A7E2U8 309 aa15.26■□□□□ 0.03
VCPKMT-201ENST00000395859 GAS7O60861 476 aa15.26■□□□□ 0.03
VCPKMT-201ENST00000395859 RPP40O75818 363 aaKnown RBP15.26■□□□□ 0.03
VCPKMT-201ENST00000395859 SRGAP2CP0DJJ0 459 aa15.26■□□□□ 0.03
VCPKMT-201ENST00000395859 AXLP30530 894 aa15.26■□□□□ 0.03
VCPKMT-201ENST00000395859 OR1D2P34982 312 aa15.26■□□□□ 0.03
VCPKMT-201ENST00000395859 LAMTOR4Q0VGL1 99 aa15.26■□□□□ 0.03
VCPKMT-201ENST00000395859 NAB2Q15742 525 aa15.26■□□□□ 0.03
VCPKMT-201ENST00000395859 DGKKQ5KSL6 1271 aa15.26■□□□□ 0.03
VCPKMT-201ENST00000395859 NOTUMQ6P988 496 aa15.26■□□□□ 0.03
VCPKMT-201ENST00000395859 C1orf228Q6PIY5 440 aa15.26■□□□□ 0.03
VCPKMT-201ENST00000395859 MICU3Q86XE3 530 aa15.26■□□□□ 0.03
VCPKMT-201ENST00000395859 ZNF579Q8NAF0 562 aaKnown RBP15.26■□□□□ 0.03
VCPKMT-201ENST00000395859 DEPDC1BQ8WUY9 529 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 170.6 ms