RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 SRP72O76094 671 aaKnown RBP14.08□□□□□ -0.15
USP49-203ENST00000394253 MYBL1P10243 752 aa14.08□□□□□ -0.15
USP49-203ENST00000394253 ATP6V1C1P21283 382 aa14.08□□□□□ -0.15
USP49-203ENST00000394253 PRPF39Q86UA1 669 aaKnown RBP14.08□□□□□ -0.15
USP49-203ENST00000394253 OSBPL8Q9BZF1 889 aa14.08□□□□□ -0.15
USP49-203ENST00000394253 OSBPL6Q9BZF3 934 aa14.08□□□□□ -0.15
USP49-203ENST00000394253 STOML2Q9UJZ1 356 aa14.08□□□□□ -0.15
USP49-203ENST00000394253 CSADQ9Y600 493 aa14.08□□□□□ -0.15
USP49-203ENST00000394253 ANO9A1A5B4 782 aa14.08□□□□□ -0.16
USP49-203ENST00000394253 ECM2O94769 699 aaPredicted RBP14.08□□□□□ -0.16
USP49-203ENST00000394253 UFL1O94874 794 aa14.08□□□□□ -0.16
USP49-203ENST00000394253 ZYXQ15942 572 aaKnown RBP14.08□□□□□ -0.16
USP49-203ENST00000394253 KBTBD12Q3ZCT8 623 aa14.08□□□□□ -0.16
USP49-203ENST00000394253 CYB5RLQ6IPT4 315 aa14.08□□□□□ -0.16
USP49-203ENST00000394253 FAM227BQ96M60 508 aa14.08□□□□□ -0.16
USP49-203ENST00000394253 KLHL4Q9C0H6 718 aa14.08□□□□□ -0.16
USP49-203ENST00000394253 RUNDC3AQ59EK9 446 aa14.08□□□□□ -0.16
USP49-203ENST00000394253 OR6P1Q8NGX9 317 aa14.08□□□□□ -0.16
USP49-203ENST00000394253 WBP11Q9Y2W2 641 aaKnown RBP14.08□□□□□ -0.16
USP49-203ENST00000394253 PPP2R3BQ9Y5P8 575 aa14.08□□□□□ -0.16
USP49-203ENST00000394253 CDH16O75309 829 aa14.08□□□□□ -0.16
USP49-203ENST00000394253 IZUMO1Q8IYV9 350 aa14.08□□□□□ -0.16
USP49-203ENST00000394253 SGSM3Q96HU1 749 aa14.08□□□□□ -0.16
USP49-203ENST00000394253 CCT8L2Q96SF2 557 aa14.08□□□□□ -0.16
USP49-203ENST00000394253 RCVRNP35243 200 aa14.08□□□□□ -0.16
USP49-203ENST00000394253 PLA2G4AP47712 749 aa14.08□□□□□ -0.16
USP49-203ENST00000394253 AKR1D1P51857 326 aa14.08□□□□□ -0.16
USP49-203ENST00000394253 RPL19P84098 196 aaKnown RBP14.08□□□□□ -0.16
USP49-203ENST00000394253 CBFA2T3O75081 653 aa14.08□□□□□ -0.16
USP49-203ENST00000394253 UBTFL6P0CB48 400 aaPredicted RBP14.08□□□□□ -0.16
USP49-203ENST00000394253 LIN54Q6MZP7 749 aa14.08□□□□□ -0.16
USP49-203ENST00000394253 DCUN1D1Q96GG9 259 aa14.08□□□□□ -0.16
USP49-203ENST00000394253 RPF1Q9H9Y2 349 aaKnown RBP14.08□□□□□ -0.16
USP49-203ENST00000394253 COMMD9Q9P000 198 aa14.08□□□□□ -0.16
USP49-203ENST00000394253 LRFN2Q9ULH4 789 aa14.08□□□□□ -0.16
USP49-203ENST00000394253 PFASO15067 1338 aa14.07□□□□□ -0.16
USP49-203ENST00000394253 AGTP01019 485 aa14.07□□□□□ -0.16
USP49-203ENST00000394253 MYL2P10916 166 aa14.07□□□□□ -0.16
USP49-203ENST00000394253 NRG3P56975 720 aa14.07□□□□□ -0.16
USP49-203ENST00000394253 ABRAXAS1Q6UWZ7 409 aa14.07□□□□□ -0.16
USP49-203ENST00000394253 SPATA5Q8NB90 893 aa14.07□□□□□ -0.16
USP49-203ENST00000394253 GPT2Q8TD30 523 aa14.07□□□□□ -0.16
USP49-203ENST00000394253 ASIC4Q96FT7 647 aa14.07□□□□□ -0.16
USP49-203ENST00000394253 USP28Q96RU2 1077 aa14.07□□□□□ -0.16
USP49-203ENST00000394253 SP110Q9HB58 689 aa14.07□□□□□ -0.16
USP49-203ENST00000394253 FAM187AA6NFU0 413 aa14.07□□□□□ -0.16
USP49-203ENST00000394253 STARP49675 285 aa14.07□□□□□ -0.16
USP49-203ENST00000394253 ECSITQ9BQ95 431 aa14.07□□□□□ -0.16
USP49-203ENST00000394253 ADGBQ8N7X0 1667 aa14.07□□□□□ -0.16
USP49-203ENST00000394253 INO80B-WBP1J3KQ70 363 aa14.07□□□□□ -0.16
USP49-203ENST00000394253 XAGE2Q96GT9 111 aa14.07□□□□□ -0.16
USP49-203ENST00000394253 WDR11Q9BZH6 1224 aa14.07□□□□□ -0.16
USP49-203ENST00000394253 BCL2L14Q9BZR8 327 aa14.07□□□□□ -0.16
USP49-203ENST00000394253 INO80BQ9C086 356 aaPredicted RBP14.07□□□□□ -0.16
USP49-203ENST00000394253 TTC39CQ8N584 583 aa14.07□□□□□ -0.16
USP49-203ENST00000394253 ELMO2Q96JJ3 720 aa14.07□□□□□ -0.16
USP49-203ENST00000394253 C1orf50Q9BV19 199 aa14.07□□□□□ -0.16
USP49-203ENST00000394253 UNC45AQ9H3U1 944 aa14.07□□□□□ -0.16
USP49-203ENST00000394253 HERC5Q9UII4 1024 aaKnown RBP14.07□□□□□ -0.16
USP49-203ENST00000394253 CHP2O43745 196 aa14.07□□□□□ -0.16
USP49-203ENST00000394253 COPAP53621 1224 aa14.07□□□□□ -0.16
USP49-203ENST00000394253 ZNF827Q17R98 1081 aa14.07□□□□□ -0.16
USP49-203ENST00000394253 MPP4Q96JB8 637 aa14.07□□□□□ -0.16
USP49-203ENST00000394253 PEX5P50542 639 aa14.07□□□□□ -0.16
USP49-203ENST00000394253 FAM173BQ6P4H8 233 aa14.07□□□□□ -0.16
USP49-203ENST00000394253 MTA3Q9BTC8 594 aa14.07□□□□□ -0.16
USP49-203ENST00000394253 VTA1Q9NP79 307 aa14.07□□□□□ -0.16
USP49-203ENST00000394253 JAG2Q9Y219 1238 aa14.07□□□□□ -0.16
USP49-203ENST00000394253 STX11O75558 287 aa14.07□□□□□ -0.16
USP49-203ENST00000394253 MSH3P20585 1137 aa14.07□□□□□ -0.16
USP49-203ENST00000394253 TBXAS1P24557 533 aaPredicted RBP14.07□□□□□ -0.16
USP49-203ENST00000394253 EFR3AQ14156 821 aa14.07□□□□□ -0.16
USP49-203ENST00000394253 DDR2Q16832 855 aa14.07□□□□□ -0.16
USP49-203ENST00000394253 ALKBH5Q6P6C2 394 aaKnown RBP14.07□□□□□ -0.16
USP49-203ENST00000394253 ADAMTS2O95450 1211 aa14.06□□□□□ -0.16
USP49-203ENST00000394253 HSMCR30P0CW71 290 aa14.06□□□□□ -0.16
USP49-203ENST00000394253 GMFBP60983 142 aa14.06□□□□□ -0.16
USP49-203ENST00000394253 P3H1Q32P28 736 aa14.06□□□□□ -0.16
USP49-203ENST00000394253 TRIM72Q6ZMU5 477 aa14.06□□□□□ -0.16
USP49-203ENST00000394253 THEM5Q8N1Q8 247 aa14.06□□□□□ -0.16
USP49-203ENST00000394253 RIBC1Q8N443 379 aaPredicted RBP14.06□□□□□ -0.16
USP49-203ENST00000394253 WDR60Q8WVS4 1066 aa14.06□□□□□ -0.16
USP49-203ENST00000394253 NGRNQ9NPE2 291 aaKnown RBP14.06□□□□□ -0.16
USP49-203ENST00000394253 ADD3Q9UEY8 706 aaKnown RBP14.06□□□□□ -0.16
USP49-203ENST00000394253 RIMBP2O15034 1052 aa14.06□□□□□ -0.16
USP49-203ENST00000394253 SUPT20HQ8NEM7 779 aa14.06□□□□□ -0.16
USP49-203ENST00000394253 MYL10Q9BUA6 226 aa14.06□□□□□ -0.16
USP49-203ENST00000394253 C6orf62Q9GZU0 229 aaPredicted RBP14.06□□□□□ -0.16
USP49-203ENST00000394253 ATP10DQ9P241 1426 aa14.06□□□□□ -0.16
USP49-203ENST00000394253 PLXNC1O60486 1568 aa14.06□□□□□ -0.16
USP49-203ENST00000394253 ITGA6P23229 1130 aa14.06□□□□□ -0.16
USP49-203ENST00000394253 SUZ12Q15022 739 aaKnown RBP14.06□□□□□ -0.16
USP49-203ENST00000394253 CYP4Z2PQ8N1L4 340 aa14.06□□□□□ -0.16
USP49-203ENST00000394253 ASAP3Q8TDY4 903 aa14.06□□□□□ -0.16
USP49-203ENST00000394253 LPIN2Q92539 896 aa14.06□□□□□ -0.16
USP49-203ENST00000394253 PPP1R36Q96LQ0 422 aa14.06□□□□□ -0.16
USP49-203ENST00000394253 ACAD9Q9H845 621 aa14.06□□□□□ -0.16
USP49-203ENST00000394253 DAPK2Q9UIK4 370 aa14.06□□□□□ -0.16
USP49-203ENST00000394253 S100GP29377 79 aa14.06□□□□□ -0.16
USP49-203ENST00000394253 GPR1P46091 355 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms