RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 WDR45BQ5MNZ6 344 aa8.71□□□□□ -1.02
LIMS1-203ENST00000393310 DHX32Q7L7V1 743 aaKnown RBP8.71□□□□□ -1.02
LIMS1-203ENST00000393310 FAM9CQ8IZT9 166 aa8.71□□□□□ -1.02
LIMS1-203ENST00000393310 CEP112Q8N8E3 955 aa8.71□□□□□ -1.02
LIMS1-203ENST00000393310 GLMNQ92990 594 aa8.71□□□□□ -1.02
LIMS1-203ENST00000393310 TAAR1Q96RJ0 339 aa8.71□□□□□ -1.02
LIMS1-203ENST00000393310 BAG1Q99933 345 aaPredicted RBP8.71□□□□□ -1.02
LIMS1-203ENST00000393310 TMEM175Q9BSA9 504 aa8.71□□□□□ -1.02
LIMS1-203ENST00000393310 PXMP2Q9NR77 195 aa8.71□□□□□ -1.02
LIMS1-203ENST00000393310 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.71□□□□□ -1.02
LIMS1-203ENST00000393310 MTCH2Q9Y6C9 303 aa8.71□□□□□ -1.02
LIMS1-203ENST00000393310 SKILP12757 684 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 CASP7P55210 303 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 TAP1Q03518 808 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 CUL3Q13618 768 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 GRAMD4Q6IC98 578 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 ZNF746Q6NUN9 644 aaPredicted RBP8.7□□□□□ -1.02
LIMS1-203ENST00000393310 CYP2U1Q7Z449 544 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 REPS2Q8NFH8 660 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 SYTL5Q8TDW5 730 aaPredicted RBP8.7□□□□□ -1.02
LIMS1-203ENST00000393310 ZNF560Q96MR9 790 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 ZSWIM4Q9H7M6 989 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 KIAA1522Q9P206 1035 aaPredicted RBP8.7□□□□□ -1.02
LIMS1-203ENST00000393310 DSEQ9UL01 958 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 CENPFP49454 3210 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 LINC00854A0A1B0GVQ3 168 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 TRIM43BA6NCK2 446 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 MAP3K7O43318 606 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 GALR2O43603 387 aaPredicted RBP8.7□□□□□ -1.02
LIMS1-203ENST00000393310 FGFR1OPO95684 399 aaKnown RBP8.7□□□□□ -1.02
LIMS1-203ENST00000393310 TNNC2P02585 160 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 HARSP12081 509 aaKnown RBP8.7□□□□□ -1.02
LIMS1-203ENST00000393310 PTPN2P17706 415 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 KIF5AQ12840 1032 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 KCNB1Q14721 858 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 Q4G0T1 1027 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 FBXO43Q4G163 708 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 RNF43Q68DV7 783 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 SLC30A9Q6PML9 568 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 KCNT2Q6UVM3 1135 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 TSTD1Q8NFU3 115 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 GIPC2Q8TF65 315 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 TRIM43Q96BQ3 446 aaPredicted RBP8.7□□□□□ -1.02
LIMS1-203ENST00000393310 ELAC1Q9H777 363 aaKnown RBP8.7□□□□□ -1.02
LIMS1-203ENST00000393310 DAAM1Q9Y4D1 1078 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 SNED1Q8TER0 1413 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 GOLGA8HP0CJ92 632 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 MYL4P12829 197 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 KLRC1P26715 233 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 YWHAEP62258 255 aaKnown RBP8.7□□□□□ -1.02
LIMS1-203ENST00000393310 ZXDAP98168 799 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 DMP1Q13316 513 aaPredicted RBP8.7□□□□□ -1.02
LIMS1-203ENST00000393310 ST3GAL2Q16842 350 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 SPATS2Q86XZ4 545 aaKnown RBP8.7□□□□□ -1.02
LIMS1-203ENST00000393310 SAMD14Q8IZD0 417 aaPredicted RBP8.7□□□□□ -1.02
LIMS1-203ENST00000393310 FNBP1Q96RU3 617 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 TSC22D3Q99576 134 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 ARHGEF3Q9NR81 526 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 DOLKQ9UPQ8 538 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 USP15Q9Y4E8 981 aaPredicted RBP8.7□□□□□ -1.02
LIMS1-203ENST00000393310 LINC01553A4QN01 128 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 TMEM8BA6NDV4 472 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 MYZAPP0CAP1 466 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 CDC25CP30307 473 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 CD151P48509 253 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 PSMC5P62195 406 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 SWSAP1Q6NVH7 229 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 HS2ST1Q7LGA3 356 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 XPO6Q96QU8 1125 aaKnown RBP8.7□□□□□ -1.02
LIMS1-203ENST00000393310 SLC26A6Q9BXS9 759 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 LARSQ9P2J5 1176 aaKnown RBP8.7□□□□□ -1.02
LIMS1-203ENST00000393310 IPO11Q9UI26 975 aaKnown RBP8.7□□□□□ -1.02
LIMS1-203ENST00000393310 STRIP2Q9ULQ0 834 aa8.7□□□□□ -1.02
LIMS1-203ENST00000393310 PRKAB2O43741 272 aa8.69□□□□□ -1.02
LIMS1-203ENST00000393310 PRPF6O94906 941 aaKnown RBP8.69□□□□□ -1.02
LIMS1-203ENST00000393310 CNPP09543 421 aaKnown RBP8.69□□□□□ -1.02
LIMS1-203ENST00000393310 PDCP20941 246 aa8.69□□□□□ -1.02
LIMS1-203ENST00000393310 CIITAP33076 1130 aa8.69□□□□□ -1.02
LIMS1-203ENST00000393310 IFT88Q13099 833 aa8.69□□□□□ -1.02
LIMS1-203ENST00000393310 ARHGAP29Q52LW3 1261 aa8.69□□□□□ -1.02
LIMS1-203ENST00000393310 ZMYM1Q5SVZ6 1142 aa8.69□□□□□ -1.02
LIMS1-203ENST00000393310 SWT1Q5T5J6 900 aaKnown RBP8.69□□□□□ -1.02
LIMS1-203ENST00000393310 ZNF618Q5T7W0 954 aa8.69□□□□□ -1.02
LIMS1-203ENST00000393310 KAZNQ674X7 775 aa8.69□□□□□ -1.02
LIMS1-203ENST00000393310 NCAPH2Q6IBW4 605 aa8.69□□□□□ -1.02
LIMS1-203ENST00000393310 RHPN2Q8IUC4 686 aa8.69□□□□□ -1.02
LIMS1-203ENST00000393310 ZKSCAN3Q9BRR0 538 aa8.69□□□□□ -1.02
LIMS1-203ENST00000393310 TRIM5Q9C035 493 aa8.69□□□□□ -1.02
LIMS1-203ENST00000393310 SPATA7Q9P0W8 599 aa8.69□□□□□ -1.02
LIMS1-203ENST00000393310 LIMD1Q9UGP4 676 aa8.69□□□□□ -1.02
LIMS1-203ENST00000393310 PCDHA6Q9UN73 950 aa8.69□□□□□ -1.02
LIMS1-203ENST00000393310 PCDHA8Q9Y5H6 950 aa8.69□□□□□ -1.02
LIMS1-203ENST00000393310 IGSF9BQ9UPX0 1349 aa8.69□□□□□ -1.02
LIMS1-203ENST00000393310 A0A087WUV0 522 aaPredicted RBP8.69□□□□□ -1.02
LIMS1-203ENST00000393310 INSRRP14616 1297 aa8.69□□□□□ -1.02
LIMS1-203ENST00000393310 XPAP23025 273 aaPredicted RBP8.69□□□□□ -1.02
LIMS1-203ENST00000393310 HNF1BP35680 557 aa8.69□□□□□ -1.02
LIMS1-203ENST00000393310 UBA7P41226 1012 aa8.69□□□□□ -1.02
LIMS1-203ENST00000393310 MRPS35P82673 323 aaKnown RBP8.69□□□□□ -1.02
LIMS1-203ENST00000393310 GFPT1Q06210 699 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms