RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 USP11P51784 963 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 POLGP54098 1239 aaPredicted RBP3.87□□□□□ -1.79
XRN1-202ENST00000392981 PRKAA2P54646 552 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 BPIFB3P59826 476 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 YWHAHQ04917 246 aaPredicted RBP3.87□□□□□ -1.79
XRN1-202ENST00000392981 CBX3Q13185 183 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 NFE2L1Q14494 772 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 LETM2Q2VYF4 491 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 C3orf36Q3SXR2 165 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 PSAPL1Q6NUJ1 521 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 KLHDC10Q6PID8 442 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 GBP6Q6ZN66 633 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 UNC13DQ70J99 1090 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 FAM129CQ86XR2 697 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 LINC00528Q8N1L1 170 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 MOSPD2Q8NHP6 518 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 CYB5D2Q8WUJ1 264 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 ZNF845Q96IR2 970 aaPredicted RBP3.87□□□□□ -1.79
XRN1-202ENST00000392981 FERMT1Q9BQL6 677 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 HTATIP2Q9BUP3 242 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 VPS37BQ9H9H4 285 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 JPH1Q9HDC5 661 aaPredicted RBP3.87□□□□□ -1.79
XRN1-202ENST00000392981 FAM83GA6ND36 823 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 TNFRSF10AO00220 468 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 SOX1O00570 391 aaPredicted RBP3.87□□□□□ -1.79
XRN1-202ENST00000392981 ADCY5O95622 1261 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 F11P03951 625 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 EPHA1P21709 976 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 RDXP35241 583 aaKnown RBP3.87□□□□□ -1.79
XRN1-202ENST00000392981 MRPL12P52815 198 aaKnown RBP3.87□□□□□ -1.79
XRN1-202ENST00000392981 DLG4P78352 724 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 NKG7Q16617 165 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 ATG16L1Q676U5 607 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 CAVIN1Q6NZI2 390 aaKnown RBP3.87□□□□□ -1.79
XRN1-202ENST00000392981 ZNF783Q6ZMS7 281 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 MOGAT3Q86VF5 341 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 ARMC8Q8IUR7 673 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 MARCH10Q8NA82 808 aaPredicted RBP3.87□□□□□ -1.79
XRN1-202ENST00000392981 WDR89Q96FK6 387 aaPredicted RBP3.87□□□□□ -1.79
XRN1-202ENST00000392981 NUCKS1Q9H1E3 243 aaKnown RBP3.87□□□□□ -1.79
XRN1-202ENST00000392981 ABCG8Q9H221 673 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 GHITMQ9H3K2 345 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 ARMCX3Q9UH62 379 aaPredicted RBP3.87□□□□□ -1.79
XRN1-202ENST00000392981 PCDHGC4Q9Y5F7 938 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 GPC6Q9Y625 555 aaPredicted RBP3.87□□□□□ -1.79
XRN1-202ENST00000392981 BTBD11A6QL63 1104 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 NT5C1B-RDH14C9J2C7 533 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 HOXC11O43248 304 aaPredicted RBP3.87□□□□□ -1.79
XRN1-202ENST00000392981 AKR1B10O60218 316 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 ACTL6BO94805 426 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 IGHDP01880 384 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 MAPTP10636 758 aaKnown RBP3.87□□□□□ -1.79
XRN1-202ENST00000392981 MYF5P13349 255 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 PORP16435 677 aaPredicted RBP3.87□□□□□ -1.79
XRN1-202ENST00000392981 GAP43P17677 238 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 IFNAR2P48551 515 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 LSM11P83369 360 aaKnown RBP eCLIP3.87□□□□□ -1.79
XRN1-202ENST00000392981 KCNAB2Q13303 367 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 CNGA2Q16280 664 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 CACHD1Q5VU97 1274 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 STYK1Q6J9G0 422 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 LRSAM1Q6UWE0 723 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 RIOX2Q8IUF8 465 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 RBM12BQ8IXT5 1001 aaKnown RBP3.87□□□□□ -1.79
XRN1-202ENST00000392981 PEX5LQ8IYB4 626 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 THNSL1Q8IYQ7 743 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 ATP11CQ8NB49 1132 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 GDAP1Q8TB36 358 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 ARHGEF2Q92974 986 aaKnown RBP3.87□□□□□ -1.79
XRN1-202ENST00000392981 NOD2Q9HC29 1040 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 H7C0S8 307 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 UBOX5O94941 541 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 PGM3O95394 542 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 TOP1P11387 765 aaKnown RBP3.87□□□□□ -1.79
XRN1-202ENST00000392981 GALNT1Q10472 559 aaPredicted RBP3.87□□□□□ -1.79
XRN1-202ENST00000392981 DAG1Q14118 895 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 OASLQ15646 514 aaKnown RBP3.87□□□□□ -1.79
XRN1-202ENST00000392981 BTBD16Q32M84 506 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 DGKKQ5KSL6 1271 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 B3GNT9Q6UX72 402 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 UNC5DQ6UXZ4 953 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 OR6B3Q8NGW1 331 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 ST7LQ8TDW4 575 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 KAT14Q9H8E8 782 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 POGKQ9P215 609 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 PCNTO95613 3336 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 RSF1Q96T23 1441 aaPredicted RBP3.86□□□□□ -1.79
XRN1-202ENST00000392981 MUSKO15146 869 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 TXNL1O43396 289 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 LETM1O95202 739 aaPredicted RBP3.86□□□□□ -1.79
XRN1-202ENST00000392981 ADH7P40394 386 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 KCNC1P48547 511 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 NOMO3P69849 1222 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 SLC13A2Q13183 592 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 TTLL4Q14679 1199 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 MUM1L1Q5H9M0 696 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 ATXN7L2Q5T6C5 722 aaPredicted RBP3.86□□□□□ -1.79
XRN1-202ENST00000392981 CRTC1Q6UUV9 634 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 TMTC1Q8IUR5 882 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 CACNA2D3Q8IZS8 1091 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms