RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 SF3B1O75533 1304 aaKnown RBP eCLIP13.85□□□□□ -0.199e-6■■■■■ 68.9
GGPS1-203ENST00000391855 EYSQ5T1H1 3165 aa13.85□□□□□ -0.19
GGPS1-203ENST00000391855 FRMD3A2A2Y4 597 aa13.85□□□□□ -0.19
GGPS1-203ENST00000391855 GRXCR2A6NFK2 248 aa13.85□□□□□ -0.19
GGPS1-203ENST00000391855 TMEM189-UBE2V1I3L0A0 370 aa13.85□□□□□ -0.19
GGPS1-203ENST00000391855 LINC01565O15544 149 aa13.85□□□□□ -0.19
GGPS1-203ENST00000391855 GLP2RO95838 553 aa13.85□□□□□ -0.19
GGPS1-203ENST00000391855 HARSP12081 509 aaKnown RBP13.85□□□□□ -0.19
GGPS1-203ENST00000391855 KCNE1P15382 129 aa13.85□□□□□ -0.19
GGPS1-203ENST00000391855 HOXB8P17481 243 aaPredicted RBP13.85□□□□□ -0.19
GGPS1-203ENST00000391855 MATR3P43243 847 aaKnown RBP eCLIP13.85□□□□□ -0.19
GGPS1-203ENST00000391855 GLUD2P49448 558 aa13.85□□□□□ -0.19
GGPS1-203ENST00000391855 CREMQ03060 361 aa13.85□□□□□ -0.19
GGPS1-203ENST00000391855 COASYQ13057 564 aa13.85□□□□□ -0.19
GGPS1-203ENST00000391855 E2F4Q16254 413 aa13.85□□□□□ -0.19
GGPS1-203ENST00000391855 FUT10Q6P4F1 479 aa13.85□□□□□ -0.19
GGPS1-203ENST00000391855 SFR1Q86XK3 245 aa13.85□□□□□ -0.19
GGPS1-203ENST00000391855 CCDC65Q8IXS2 484 aa13.85□□□□□ -0.19
GGPS1-203ENST00000391855 CEP120Q8N960 986 aa13.85□□□□□ -0.19
GGPS1-203ENST00000391855 DNAJC19Q96DA6 116 aa13.85□□□□□ -0.19
GGPS1-203ENST00000391855 PPP1R10Q96QC0 940 aaKnown RBP13.85□□□□□ -0.19
GGPS1-203ENST00000391855 VN1R3Q9BXE9 311 aa13.85□□□□□ -0.19
GGPS1-203ENST00000391855 PANK2Q9BZ23 570 aa13.85□□□□□ -0.19
GGPS1-203ENST00000391855 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.85□□□□□ -0.19
GGPS1-203ENST00000391855 DZANK1Q9NVP4 752 aa13.85□□□□□ -0.19
GGPS1-203ENST00000391855 PRKAG3Q9UGI9 489 aa13.85□□□□□ -0.19
GGPS1-203ENST00000391855 PCDHA7Q9UN72 937 aa13.85□□□□□ -0.19
GGPS1-203ENST00000391855 EXOC7Q9UPT5 735 aa13.85□□□□□ -0.19
GGPS1-203ENST00000391855 BRWD1Q9NSI6 2320 aa13.85□□□□□ -0.19
GGPS1-203ENST00000391855 PER2O15055 1255 aa13.84□□□□□ -0.19
GGPS1-203ENST00000391855 TADA2AO75478 443 aa13.84□□□□□ -0.19
GGPS1-203ENST00000391855 EFEMP2O95967 443 aa13.84□□□□□ -0.19
GGPS1-203ENST00000391855 CLTAP09496 248 aa13.84□□□□□ -0.19
GGPS1-203ENST00000391855 IDEP14735 1019 aa13.84□□□□□ -0.19
GGPS1-203ENST00000391855 NMT1P30419 496 aaKnown RBP13.84□□□□□ -0.19
GGPS1-203ENST00000391855 DLX2Q07687 328 aaPredicted RBP13.84□□□□□ -0.19
GGPS1-203ENST00000391855 KCNC3Q14003 757 aa13.84□□□□□ -0.19
GGPS1-203ENST00000391855 NAB2Q15742 525 aa13.84□□□□□ -0.19
GGPS1-203ENST00000391855 RESP18Q5W5W9 173 aa13.84□□□□□ -0.19
GGPS1-203ENST00000391855 SLFN12LQ6IEE8 588 aa13.84□□□□□ -0.19
GGPS1-203ENST00000391855 KIAA1841Q6NSI8 718 aa13.84□□□□□ -0.19
GGPS1-203ENST00000391855 STXBP4Q6ZWJ1 553 aa13.84□□□□□ -0.19
GGPS1-203ENST00000391855 ZNF720Q7Z2F6 126 aa13.84□□□□□ -0.19
GGPS1-203ENST00000391855 PLCD3Q8N3E9 789 aa13.84□□□□□ -0.19
GGPS1-203ENST00000391855 SMRP1Q8NCR6 262 aa13.84□□□□□ -0.19
GGPS1-203ENST00000391855 DHX58Q96C10 678 aa13.84□□□□□ -0.19
GGPS1-203ENST00000391855 DDX27Q96GQ7 796 aaKnown RBP13.84□□□□□ -0.19
GGPS1-203ENST00000391855 SPATA32Q96LK8 384 aa13.84□□□□□ -0.19
GGPS1-203ENST00000391855 TSPAN18Q96SJ8 248 aa13.84□□□□□ -0.19
GGPS1-203ENST00000391855 SCAND2PQ9GZW5 306 aaPredicted RBP13.84□□□□□ -0.19
GGPS1-203ENST00000391855 MRPL44Q9H9J2 332 aaKnown RBP13.84□□□□□ -0.19
GGPS1-203ENST00000391855 PLEKHA5Q9HAU0 1116 aa13.84□□□□□ -0.19
GGPS1-203ENST00000391855 KBTBD4Q9NVX7 518 aa13.84□□□□□ -0.19
GGPS1-203ENST00000391855 CLEC1BQ9P126 229 aa13.84□□□□□ -0.19
GGPS1-203ENST00000391855 CNTN3Q9P232 1028 aa13.84□□□□□ -0.19
GGPS1-203ENST00000391855 ZDHHC9Q9Y397 364 aa13.84□□□□□ -0.19
GGPS1-203ENST00000391855 PCDHB13Q9Y5F0 798 aa13.84□□□□□ -0.19
GGPS1-203ENST00000391855 SMIM28A0A1B0GU29 152 aa13.83□□□□□ -0.2
GGPS1-203ENST00000391855 CASTOR2A6NHX0 329 aa13.83□□□□□ -0.2
GGPS1-203ENST00000391855 OGTO15294 1046 aa13.83□□□□□ -0.2
GGPS1-203ENST00000391855 MBTPS2O43462 519 aa13.83□□□□□ -0.2
GGPS1-203ENST00000391855 CLASP2O75122 1294 aaKnown RBP13.83□□□□□ -0.2
GGPS1-203ENST00000391855 PPP1R37O75864 691 aa13.83□□□□□ -0.2
GGPS1-203ENST00000391855 C1RP00736 705 aa13.83□□□□□ -0.2
GGPS1-203ENST00000391855 OSTNP61366 133 aa13.83□□□□□ -0.2
GGPS1-203ENST00000391855 NUCB2P80303 420 aa13.83□□□□□ -0.2
GGPS1-203ENST00000391855 DSG1Q02413 1049 aa13.83□□□□□ -0.2
GGPS1-203ENST00000391855 SMAD2Q15796 467 aaKnown RBP13.83□□□□□ -0.2
GGPS1-203ENST00000391855 USP41Q3LFD5 358 aa13.83□□□□□ -0.2
GGPS1-203ENST00000391855 TPRNQ4KMQ1 711 aa13.83□□□□□ -0.2
GGPS1-203ENST00000391855 HERC4Q5GLZ8 1057 aaPredicted RBP13.83□□□□□ -0.2
GGPS1-203ENST00000391855 GLRA4Q5JXX5 417 aa13.83□□□□□ -0.2
GGPS1-203ENST00000391855 ANKRD54Q6NXT1 300 aa13.83□□□□□ -0.2
GGPS1-203ENST00000391855 CNNM4Q6P4Q7 775 aa13.83□□□□□ -0.2
GGPS1-203ENST00000391855 PDXDC1Q6P996 788 aa13.83□□□□□ -0.2
GGPS1-203ENST00000391855 ELMSAN1Q6PJG2 1045 aa13.83□□□□□ -0.2
GGPS1-203ENST00000391855 ALKAL1Q6UXT8 129 aa13.83□□□□□ -0.2
GGPS1-203ENST00000391855 ZBTB45Q96K62 511 aaPredicted RBP13.83□□□□□ -0.2
GGPS1-203ENST00000391855 CHST7Q9NS84 486 aa13.83□□□□□ -0.2
GGPS1-203ENST00000391855 PANK4Q9NVE7 773 aa13.83□□□□□ -0.2
GGPS1-203ENST00000391855 DPP7Q9UHL4 492 aa13.83□□□□□ -0.2
GGPS1-203ENST00000391855 BARX2Q9UMQ3 279 aaPredicted RBP13.83□□□□□ -0.2
GGPS1-203ENST00000391855 HCFC2Q9Y5Z7 792 aa13.83□□□□□ -0.2
GGPS1-203ENST00000391855 PRUNE2Q8WUY3 3088 aa13.83□□□□□ -0.2
GGPS1-203ENST00000391855 CITO14578 2027 aa13.82□□□□□ -0.2
GGPS1-203ENST00000391855 TNFRSF10AO00220 468 aa13.82□□□□□ -0.2
GGPS1-203ENST00000391855 XPOTO43592 962 aaKnown RBP13.82□□□□□ -0.2
GGPS1-203ENST00000391855 LILRB3O75022 631 aa13.82□□□□□ -0.2
GGPS1-203ENST00000391855 KIF4AO95239 1232 aa13.82□□□□□ -0.2
GGPS1-203ENST00000391855 ADH1AP07327 375 aa13.82□□□□□ -0.2
GGPS1-203ENST00000391855 IL9P15248 144 aa13.82□□□□□ -0.2
GGPS1-203ENST00000391855 POU5F1Q01860 360 aaKnown RBP13.82□□□□□ -0.2
GGPS1-203ENST00000391855 PPP2R3AQ06190 1150 aa13.82□□□□□ -0.2
GGPS1-203ENST00000391855 POSTNQ15063 836 aa13.82□□□□□ -0.2
GGPS1-203ENST00000391855 L1TD1Q5T7N2 865 aaKnown RBP13.82□□□□□ -0.2
GGPS1-203ENST00000391855 ADALQ6DHV7 355 aa13.82□□□□□ -0.2
GGPS1-203ENST00000391855 DCLRE1AQ6PJP8 1040 aa13.82□□□□□ -0.2
GGPS1-203ENST00000391855 CD302Q8IX05 232 aa13.82□□□□□ -0.2
GGPS1-203ENST00000391855 VN1R2Q8NFZ6 395 aa13.82□□□□□ -0.2
GGPS1-203ENST00000391855 LEO1Q8WVC0 666 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms