RNA–Protein interactions for RNA: ENST00000391310.1

RNU6-1239P-201, Transcript of RNA, U6 small nuclear 1239, pseudogene, humanhuman

BASIC

Gene RNU6-1239P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1239P-201ENST00000391310 SSBP05455 408 aaKnown RBP eCLIP1.51□□□□□ -2.17
RNU6-1239P-201ENST00000391310 ELFN1P0C7U0 828 aa1.51□□□□□ -2.17
RNU6-1239P-201ENST00000391310 SFPQP23246 707 aaKnown RBP eCLIP1.51□□□□□ -2.17
RNU6-1239P-201ENST00000391310 ETFBP38117 255 aa1.51□□□□□ -2.17
RNU6-1239P-201ENST00000391310 NANOS2P60321 138 aaKnown RBP1.51□□□□□ -2.17
RNU6-1239P-201ENST00000391310 DDR2Q16832 855 aa1.51□□□□□ -2.17
RNU6-1239P-201ENST00000391310 TMEM177Q53S58 311 aa1.51□□□□□ -2.17
RNU6-1239P-201ENST00000391310 PXDC1Q5TGL8 231 aa1.51□□□□□ -2.17
RNU6-1239P-201ENST00000391310 KIAA1841Q6NSI8 718 aa1.51□□□□□ -2.17
RNU6-1239P-201ENST00000391310 TIGD7Q6NT04 549 aaPredicted RBP1.51□□□□□ -2.17
RNU6-1239P-201ENST00000391310 UNQ6494/PRO21346Q6UXR6 183 aa1.51□□□□□ -2.17
RNU6-1239P-201ENST00000391310 NT5DC4Q86YG4 428 aa1.51□□□□□ -2.17
RNU6-1239P-201ENST00000391310 SSH3Q8TE77 659 aa1.51□□□□□ -2.17
RNU6-1239P-201ENST00000391310 ZNF669Q96BR6 464 aaPredicted RBP1.51□□□□□ -2.17
RNU6-1239P-201ENST00000391310 FUBP3Q96I24 572 aaKnown RBP eCLIP1.51□□□□□ -2.17
RNU6-1239P-201ENST00000391310 ZSWIM1Q9BR11 485 aa1.51□□□□□ -2.17
RNU6-1239P-201ENST00000391310 PRSS22Q9GZN4 317 aa1.51□□□□□ -2.17
RNU6-1239P-201ENST00000391310 REXO4Q9GZR2 422 aaKnown RBP1.51□□□□□ -2.17
RNU6-1239P-201ENST00000391310 SLTMQ9NWH9 1034 aaKnown RBP eCLIP1.51□□□□□ -2.17
RNU6-1239P-201ENST00000391310 TRBV23-1A0A0A0MS06 115 aa1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 A0A1W2PR48 441 aa1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 FAM90A8PA6NJQ4 464 aa1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 GCOM1H8Y6P7 765 aaPredicted RBP1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 PROM1O43490 865 aa1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 ADCY3O60266 1144 aa1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 PRPF6O94906 941 aaKnown RBP1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 OAZ2O95190 189 aa1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 GPANK1O95872 356 aa1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 FAM90A13PP0C7W8 464 aa1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 FAM90A24PP0C7X0 464 aa1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 TNFRSF1BP20333 461 aa1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 FGFR4P22455 802 aa1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 MPGP29372 298 aa1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 SREBF1P36956 1147 aa1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 HILS1P60008 231 aa1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 HSD11B2P80365 405 aa1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 SEMA3AQ14563 771 aa1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 RABEP1Q15276 862 aa1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 UBE3CQ15386 1083 aa1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 TWIST1Q15672 202 aa1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 ARHGAP44Q17R89 818 aa1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 KRT71Q3SY84 523 aa1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 TMEM119Q4V9L6 283 aa1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 ATXN7L2Q5T6C5 722 aaPredicted RBP1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 VWA1Q6PCB0 445 aa1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 SLC2A7Q6PXP3 512 aa1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 C14orf37Q86TY3 774 aa1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 PHYKPLQ8IUZ5 450 aa1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 CELF2-AS1Q8N7Q2 184 aa1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 NR4A3Q92570 626 aa1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 CEP95Q96GE4 821 aa1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 PHACTR3Q96KR7 559 aa1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 CDC6Q99741 560 aa1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 FDXACB1Q9BRP7 624 aaPredicted RBP1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 TRMOQ9BU70 441 aa1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 MYL10Q9BUA6 226 aa1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 SPATA9Q9BWV2 254 aa1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 QTRT1Q9BXR0 403 aaKnown RBP1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 TRIM55Q9BYV6 548 aa1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 PODXL2Q9NZ53 605 aa1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 PADI4Q9UM07 663 aa1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 ICKQ9UPZ9 632 aa1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 INPP5FQ9Y2H2 1132 aa1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 AFG3L2Q9Y4W6 797 aa1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 PCDHB6Q9Y5E3 794 aa1.5□□□□□ -2.17
RNU6-1239P-201ENST00000391310 LOC101059915A0A1B0GWI6 518 aaPredicted RBP1.49□□□□□ -2.17
RNU6-1239P-201ENST00000391310 LINC00473A8K010 186 aa1.49□□□□□ -2.17
RNU6-1239P-201ENST00000391310 GTPBP1O00178 669 aaKnown RBP1.49□□□□□ -2.17
RNU6-1239P-201ENST00000391310 NTN3O00634 580 aaPredicted RBP1.49□□□□□ -2.17
RNU6-1239P-201ENST00000391310 SOCS2O14508 198 aa1.49□□□□□ -2.17
RNU6-1239P-201ENST00000391310 GASTP01350 101 aa1.49□□□□□ -2.17
RNU6-1239P-201ENST00000391310 TUBB4AP04350 444 aa1.49□□□□□ -2.17
RNU6-1239P-201ENST00000391310 ALPLP05186 524 aa1.49□□□□□ -2.17
RNU6-1239P-201ENST00000391310 SRGNP10124 158 aa1.49□□□□□ -2.17
RNU6-1239P-201ENST00000391310 GCSHP23434 173 aa1.49□□□□□ -2.17
RNU6-1239P-201ENST00000391310 PTX3P26022 381 aaPredicted RBP1.49□□□□□ -2.17
RNU6-1239P-201ENST00000391310 FLT3LGP49771 235 aa1.49□□□□□ -2.17
RNU6-1239P-201ENST00000391310 MECP2P51608 486 aaKnown RBP1.49□□□□□ -2.17
RNU6-1239P-201ENST00000391310 CLRN1P58418 232 aa1.49□□□□□ -2.17
RNU6-1239P-201ENST00000391310 SF3B3Q15393 1217 aaKnown RBP1.49□□□□□ -2.17
RNU6-1239P-201ENST00000391310 CCDC178Q5BJE1 867 aa1.49□□□□□ -2.17
RNU6-1239P-201ENST00000391310 CEP78Q5JTW2 689 aa1.49□□□□□ -2.17
RNU6-1239P-201ENST00000391310 FAM209AQ5JX71 171 aa1.49□□□□□ -2.17
RNU6-1239P-201ENST00000391310 MFSD14BQ5SR56 506 aa1.49□□□□□ -2.17
RNU6-1239P-201ENST00000391310 MED25Q71SY5 747 aa1.49□□□□□ -2.17
RNU6-1239P-201ENST00000391310 PDZD4Q76G19 769 aaPredicted RBP1.49□□□□□ -2.17
RNU6-1239P-201ENST00000391310 IRF2BP2Q7Z5L9 587 aa1.49□□□□□ -2.17
RNU6-1239P-201ENST00000391310 C7orf31Q8N865 590 aa1.49□□□□□ -2.17
RNU6-1239P-201ENST00000391310 CDYL2Q8N8U2 506 aa1.49□□□□□ -2.17
RNU6-1239P-201ENST00000391310 GSTCDQ8NEC7 633 aa1.49□□□□□ -2.17
RNU6-1239P-201ENST00000391310 SLC35B2Q8TB61 432 aa1.49□□□□□ -2.17
RNU6-1239P-201ENST00000391310 TFAP2BQ92481 460 aa1.49□□□□□ -2.17
RNU6-1239P-201ENST00000391310 FERMT2Q96AC1 680 aa1.49□□□□□ -2.17
RNU6-1239P-201ENST00000391310 FBXL20Q96IG2 436 aa1.49□□□□□ -2.17
RNU6-1239P-201ENST00000391310 VCPIP1Q96JH7 1222 aa1.49□□□□□ -2.17
RNU6-1239P-201ENST00000391310 HAPLN3Q96S86 360 aa1.49□□□□□ -2.17
RNU6-1239P-201ENST00000391310 SH2D3AQ9BRG2 576 aa1.49□□□□□ -2.17
RNU6-1239P-201ENST00000391310 POFUT1Q9H488 388 aa1.49□□□□□ -2.17
RNU6-1239P-201ENST00000391310 PCIF1Q9H4Z3 704 aa1.49□□□□□ -2.17
RNU6-1239P-201ENST00000391310 ST7Q9NRC1 585 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms