RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 TM4SF1P30408 202 aa10.9□□□□□ -0.66
PKP4-201ENST00000389757 RGS7P49802 495 aa10.9□□□□□ -0.66
PKP4-201ENST00000389757 TAF6P49848 677 aa10.9□□□□□ -0.66
PKP4-201ENST00000389757 CLCN3P51790 818 aa10.9□□□□□ -0.66
PKP4-201ENST00000389757 NOP14P78316 857 aaKnown RBP10.9□□□□□ -0.66
PKP4-201ENST00000389757 ADCY1Q08828 1119 aa10.9□□□□□ -0.66
PKP4-201ENST00000389757 AP1B1Q10567 949 aa10.9□□□□□ -0.66
PKP4-201ENST00000389757 ZNF235Q14590 738 aa10.9□□□□□ -0.66
PKP4-201ENST00000389757 METTL7BQ6UX53 244 aa10.9□□□□□ -0.66
PKP4-201ENST00000389757 C15orf52Q6ZUT6 534 aaKnown RBP10.9□□□□□ -0.66
PKP4-201ENST00000389757 SOCS4Q8WXH5 440 aa10.9□□□□□ -0.66
PKP4-201ENST00000389757 TMEM169Q96HH4 297 aa10.9□□□□□ -0.66
PKP4-201ENST00000389757 P2RX7Q99572 595 aaKnown RBP10.9□□□□□ -0.66
PKP4-201ENST00000389757 COLEC11Q9BWP8 271 aa10.9□□□□□ -0.66
PKP4-201ENST00000389757 ASCC2Q9H1I8 757 aaPredicted RBP10.9□□□□□ -0.66
PKP4-201ENST00000389757 ARHGAP42A6NI28 874 aa10.9□□□□□ -0.67
PKP4-201ENST00000389757 RASGRF2O14827 1237 aa10.9□□□□□ -0.67
PKP4-201ENST00000389757 MMEL1Q495T6 779 aa10.9□□□□□ -0.67
PKP4-201ENST00000389757 TAF1BQ53T94 588 aaPredicted RBP10.9□□□□□ -0.67
PKP4-201ENST00000389757 STKLD1Q8NE28 680 aa10.9□□□□□ -0.67
PKP4-201ENST00000389757 NUF2Q9BZD4 464 aa10.9□□□□□ -0.67
PKP4-201ENST00000389757 TBK1Q9UHD2 729 aa10.9□□□□□ -0.67
PKP4-201ENST00000389757 HOXA2O43364 376 aa10.89□□□□□ -0.67
PKP4-201ENST00000389757 ZNF189O75820 626 aaPredicted RBP10.89□□□□□ -0.67
PKP4-201ENST00000389757 IFNAR2P48551 515 aa10.89□□□□□ -0.67
PKP4-201ENST00000389757 CLEC17AQ6ZS10 378 aa10.89□□□□□ -0.67
PKP4-201ENST00000389757 PTF1AQ7RTS3 328 aa10.89□□□□□ -0.67
PKP4-201ENST00000389757 RAB3IPQ96QF0 476 aaPredicted RBP10.89□□□□□ -0.67
PKP4-201ENST00000389757 NIF3L1Q9GZT8 377 aa10.89□□□□□ -0.67
PKP4-201ENST00000389757 SAYSD1Q9NPB0 183 aa10.89□□□□□ -0.67
PKP4-201ENST00000389757 DNAJC17Q9NVM6 304 aaKnown RBP10.89□□□□□ -0.67
PKP4-201ENST00000389757 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.89□□□□□ -0.67
PKP4-201ENST00000389757 ZWINTO95229 277 aa10.89□□□□□ -0.67
PKP4-201ENST00000389757 SLCO1A2P46721 670 aa10.89□□□□□ -0.67
PKP4-201ENST00000389757 MAP3K21Q5TCX8 1036 aa10.89□□□□□ -0.67
PKP4-201ENST00000389757 KIFC3Q9BVG8 833 aa10.89□□□□□ -0.67
PKP4-201ENST00000389757 ZC3H4Q9UPT8 1303 aaKnown RBP10.89□□□□□ -0.67
PKP4-201ENST00000389757 KRT37O76014 449 aa10.89□□□□□ -0.67
PKP4-201ENST00000389757 TGFB3P10600 412 aa10.89□□□□□ -0.67
PKP4-201ENST00000389757 NAMPTP43490 491 aa10.89□□□□□ -0.67
PKP4-201ENST00000389757 TPI1P60174 286 aa10.89□□□□□ -0.67
PKP4-201ENST00000389757 ROR1Q01973 937 aa10.89□□□□□ -0.67
PKP4-201ENST00000389757 ZNF211Q13398 564 aaPredicted RBP10.89□□□□□ -0.67
PKP4-201ENST00000389757 KCNB2Q92953 911 aa10.89□□□□□ -0.67
PKP4-201ENST00000389757 HPDLQ96IR7 371 aa10.89□□□□□ -0.67
PKP4-201ENST00000389757 MRIQ9BWK5 157 aa10.89□□□□□ -0.67
PKP4-201ENST00000389757 VCX3BQ9H321 246 aa10.89□□□□□ -0.67
PKP4-201ENST00000389757 PIK3R2O00459 728 aa10.89□□□□□ -0.67
PKP4-201ENST00000389757 P4HA2O15460 535 aa10.89□□□□□ -0.67
PKP4-201ENST00000389757 SRGAP2O75044 1071 aa10.89□□□□□ -0.67
PKP4-201ENST00000389757 KLRC1P26715 233 aa10.89□□□□□ -0.67
PKP4-201ENST00000389757 ATN1P54259 1190 aaPredicted RBP10.89□□□□□ -0.67
PKP4-201ENST00000389757 SLC7A5Q01650 507 aa10.89□□□□□ -0.67
PKP4-201ENST00000389757 Q4G0T1 1027 aa10.89□□□□□ -0.67
PKP4-201ENST00000389757 SEPT8Q92599 483 aa10.89□□□□□ -0.67
PKP4-201ENST00000389757 MMTAG2Q9BU76 263 aaKnown RBP10.89□□□□□ -0.67
PKP4-201ENST00000389757 SNX24Q9Y343 169 aa10.89□□□□□ -0.67
PKP4-201ENST00000389757 UCHL3P15374 230 aa10.88□□□□□ -0.67
PKP4-201ENST00000389757 PDGFRAP16234 1089 aa10.88□□□□□ -0.67
PKP4-201ENST00000389757 SLC1A1P43005 524 aa10.88□□□□□ -0.67
PKP4-201ENST00000389757 GLE1Q53GS7 698 aaKnown RBP10.88□□□□□ -0.67
PKP4-201ENST00000389757 CDR2LQ86X02 465 aaPredicted RBP10.88□□□□□ -0.67
PKP4-201ENST00000389757 RUSC1Q9BVN2 902 aa10.88□□□□□ -0.67
PKP4-201ENST00000389757 PDE11AQ9HCR9 933 aa10.88□□□□□ -0.67
PKP4-201ENST00000389757 BAG5Q9UL15 447 aa10.88□□□□□ -0.67
PKP4-201ENST00000389757 DFFAO00273 331 aa10.88□□□□□ -0.67
PKP4-201ENST00000389757 PPP1R12AO14974 1030 aaPredicted RBP10.88□□□□□ -0.67
PKP4-201ENST00000389757 ACADSBP45954 432 aa10.88□□□□□ -0.67
PKP4-201ENST00000389757 ALDH1A3P47895 512 aa10.88□□□□□ -0.67
PKP4-201ENST00000389757 EIF3BP55884 814 aaKnown RBP10.88□□□□□ -0.67
PKP4-201ENST00000389757 FAM49BQ9NUQ9 324 aa10.88□□□□□ -0.67
PKP4-201ENST00000389757 FAM8A1Q9UBU6 413 aa10.88□□□□□ -0.67
PKP4-201ENST00000389757 OGTO15294 1046 aa10.88□□□□□ -0.67
PKP4-201ENST00000389757 GNL1P36915 607 aaPredicted RBP10.88□□□□□ -0.67
PKP4-201ENST00000389757 INHBEP58166 350 aa10.88□□□□□ -0.67
PKP4-201ENST00000389757 CAV1Q03135 178 aa10.88□□□□□ -0.67
PKP4-201ENST00000389757 CD302Q8IX05 232 aa10.88□□□□□ -0.67
PKP4-201ENST00000389757 SCG3Q8WXD2 468 aaKnown RBP10.88□□□□□ -0.67
PKP4-201ENST00000389757 AGO4Q9HCK5 861 aaKnown RBP10.88□□□□□ -0.67
PKP4-201ENST00000389757 CAMTA1Q9Y6Y1 1673 aa10.88□□□□□ -0.67
PKP4-201ENST00000389757 H3BRB1 525 aa10.88□□□□□ -0.67
PKP4-201ENST00000389757 APOL1O14791 398 aa10.88□□□□□ -0.67
PKP4-201ENST00000389757 TTI1O43156 1089 aa10.88□□□□□ -0.67
PKP4-201ENST00000389757 MED24O75448 989 aa10.88□□□□□ -0.67
PKP4-201ENST00000389757 ATXN8OSP0DMR3 200 aa10.88□□□□□ -0.67
PKP4-201ENST00000389757 CYP2C19P33261 490 aa10.88□□□□□ -0.67
PKP4-201ENST00000389757 FMR1Q06787 632 aaKnown RBP eCLIP10.88□□□□□ -0.672e-6■■■■■ 30.9
PKP4-201ENST00000389757 PPIL2Q13356 520 aa10.88□□□□□ -0.67
PKP4-201ENST00000389757 ALKBH8Q96BT7 664 aaKnown RBP10.88□□□□□ -0.67
PKP4-201ENST00000389757 TUT1Q9H6E5 874 aaKnown RBP10.88□□□□□ -0.67
PKP4-201ENST00000389757 BFARQ9NZS9 450 aa10.88□□□□□ -0.67
PKP4-201ENST00000389757 TOM1L1O75674 476 aa10.88□□□□□ -0.67
PKP4-201ENST00000389757 ACSL3O95573 720 aa10.88□□□□□ -0.67
PKP4-201ENST00000389757 CYP2C8P10632 490 aa10.88□□□□□ -0.67
PKP4-201ENST00000389757 ODC1P11926 461 aa10.88□□□□□ -0.67
PKP4-201ENST00000389757 AKR1A1P14550 325 aa10.88□□□□□ -0.67
PKP4-201ENST00000389757 ST8SIA6P61647 398 aa10.88□□□□□ -0.67
PKP4-201ENST00000389757 GABPB1Q06547 395 aaPredicted RBP10.88□□□□□ -0.67
PKP4-201ENST00000389757 VGLL4Q14135 290 aa10.88□□□□□ -0.67
PKP4-201ENST00000389757 PGM5Q15124 567 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms