RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 PSMG1O95456 288 aa15.63■□□□□ 0.09
VPS9D1-201ENST00000389386 TTC4O95801 387 aa15.63■□□□□ 0.09
VPS9D1-201ENST00000389386 ZCCHC18P0CG32 403 aa15.63■□□□□ 0.09
VPS9D1-201ENST00000389386 RTP1P59025 263 aa15.63■□□□□ 0.09
VPS9D1-201ENST00000389386 CDR2Q01850 454 aa15.63■□□□□ 0.09
VPS9D1-201ENST00000389386 ADCY1Q08828 1119 aa15.63■□□□□ 0.09
VPS9D1-201ENST00000389386 SFSWAPQ12872 951 aaKnown RBP15.63■□□□□ 0.09
VPS9D1-201ENST00000389386 CTTNQ14247 550 aaKnown RBP15.63■□□□□ 0.09
VPS9D1-201ENST00000389386 TMEM119Q4V9L6 283 aa15.63■□□□□ 0.09
VPS9D1-201ENST00000389386 SPOCK2Q92563 424 aa15.63■□□□□ 0.09
VPS9D1-201ENST00000389386 ARHGEF26Q96DR7 871 aa15.63■□□□□ 0.09
VPS9D1-201ENST00000389386 SAR1AQ9NR31 198 aa15.63■□□□□ 0.09
VPS9D1-201ENST00000389386 STX18Q9P2W9 335 aaKnown RBP15.63■□□□□ 0.09
VPS9D1-201ENST00000389386 MAD2L2Q9UI95 211 aa15.63■□□□□ 0.09
VPS9D1-201ENST00000389386 PASKQ96RG2 1323 aa15.62■□□□□ 0.09
VPS9D1-201ENST00000389386 CETPP11597 493 aa15.62■□□□□ 0.09
VPS9D1-201ENST00000389386 ABCB4P21439 1286 aa15.62■□□□□ 0.09
VPS9D1-201ENST00000389386 COILP38432 576 aaPredicted RBP15.62■□□□□ 0.09
VPS9D1-201ENST00000389386 USP46P62068 366 aa15.62■□□□□ 0.09
VPS9D1-201ENST00000389386 GRM4Q14833 912 aa15.62■□□□□ 0.09
VPS9D1-201ENST00000389386 TMEM63BQ5T3F8 832 aa15.62■□□□□ 0.09
VPS9D1-201ENST00000389386 GLYCTKQ8IVS8 523 aa15.62■□□□□ 0.09
VPS9D1-201ENST00000389386 STKLD1Q8NE28 680 aa15.62■□□□□ 0.09
VPS9D1-201ENST00000389386 SCFD1Q8WVM8 642 aa15.62■□□□□ 0.09
VPS9D1-201ENST00000389386 CTNNBL1Q8WYA6 563 aaPredicted RBP15.62■□□□□ 0.09
VPS9D1-201ENST00000389386 ASCC2Q9H1I8 757 aaPredicted RBP15.62■□□□□ 0.09
VPS9D1-201ENST00000389386 TMEM165Q9HC07 324 aa15.62■□□□□ 0.09
VPS9D1-201ENST00000389386 NAALADL1Q9UQQ1 740 aa15.62■□□□□ 0.09
VPS9D1-201ENST00000389386 PTPN22Q9Y2R2 807 aa15.62■□□□□ 0.09
VPS9D1-201ENST00000389386 HNRNPCL1O60812 293 aaKnown RBP15.62■□□□□ 0.09
VPS9D1-201ENST00000389386 ASMTLO95671 621 aa15.62■□□□□ 0.09
VPS9D1-201ENST00000389386 EPHA7Q15375 998 aa15.62■□□□□ 0.09
VPS9D1-201ENST00000389386 CYP1B1Q16678 543 aa15.62■□□□□ 0.09
VPS9D1-201ENST00000389386 ZNF365Q70YC5 407 aa15.62■□□□□ 0.09
VPS9D1-201ENST00000389386 MIGA2Q7L4E1 593 aa15.62■□□□□ 0.09
VPS9D1-201ENST00000389386 EPM2AIP1Q7L775 607 aaPredicted RBP15.62■□□□□ 0.09
VPS9D1-201ENST00000389386 CLEC10AQ8IUN9 316 aa15.62■□□□□ 0.09
VPS9D1-201ENST00000389386 CCDC105Q8IYK2 499 aa15.62■□□□□ 0.09
VPS9D1-201ENST00000389386 SPZ1Q9BXG8 430 aa15.62■□□□□ 0.09
VPS9D1-201ENST00000389386 VAT1LQ9HCJ6 419 aa15.62■□□□□ 0.09
VPS9D1-201ENST00000389386 BIN2Q9UBW5 565 aaPredicted RBP15.62■□□□□ 0.09
VPS9D1-201ENST00000389386 TBK1Q9UHD2 729 aa15.62■□□□□ 0.09
VPS9D1-201ENST00000389386 COG5Q9UP83 839 aa15.62■□□□□ 0.09
VPS9D1-201ENST00000389386 TBC1D30Q9Y2I9 924 aa15.62■□□□□ 0.09
VPS9D1-201ENST00000389386 ACTL7BQ9Y614 415 aa15.62■□□□□ 0.09
VPS9D1-201ENST00000389386 FAM47DPA6NHR8 397 aa15.61■□□□□ 0.09
VPS9D1-201ENST00000389386 BPIFB4P59827 614 aa15.61■□□□□ 0.09
VPS9D1-201ENST00000389386 CALCOCO2Q13137 446 aa15.61■□□□□ 0.09
VPS9D1-201ENST00000389386 KYNUQ16719 465 aa15.61■□□□□ 0.09
VPS9D1-201ENST00000389386 CTC1Q2NKJ3 1217 aa15.61■□□□□ 0.09
VPS9D1-201ENST00000389386 SLC45A4Q5BKX6 768 aa15.61■□□□□ 0.09
VPS9D1-201ENST00000389386 GJB7Q6PEY0 223 aa15.61■□□□□ 0.09
VPS9D1-201ENST00000389386 RGS9BPQ6ZS82 235 aa15.61■□□□□ 0.09
VPS9D1-201ENST00000389386 DTX3LQ8TDB6 740 aa15.61■□□□□ 0.09
VPS9D1-201ENST00000389386 TBCKQ8TEA7 893 aa15.61■□□□□ 0.09
VPS9D1-201ENST00000389386 SNX29Q8TEQ0 813 aa15.61■□□□□ 0.09
VPS9D1-201ENST00000389386 KRT35Q92764 455 aa15.61■□□□□ 0.09
VPS9D1-201ENST00000389386 TUBGCP5Q96RT8 1024 aa15.61■□□□□ 0.09
VPS9D1-201ENST00000389386 LBHD1Q9BQE6 289 aaPredicted RBP15.61■□□□□ 0.09
VPS9D1-201ENST00000389386 ZNF212Q9UDV6 495 aa15.61■□□□□ 0.09
VPS9D1-201ENST00000389386 ALG6Q9Y672 507 aa15.61■□□□□ 0.09
VPS9D1-201ENST00000389386 POTEMA6NI47 508 aa15.61■□□□□ 0.09
VPS9D1-201ENST00000389386 PPEF1O14829 653 aaPredicted RBP15.61■□□□□ 0.09
VPS9D1-201ENST00000389386 EDF1O60869 148 aaKnown RBP15.61■□□□□ 0.09
VPS9D1-201ENST00000389386 ZBTB7AO95365 584 aa15.61■□□□□ 0.09
VPS9D1-201ENST00000389386 CHKAP35790 457 aa15.61■□□□□ 0.09
VPS9D1-201ENST00000389386 CCNFP41002 786 aa15.61■□□□□ 0.09
VPS9D1-201ENST00000389386 EIF6P56537 245 aaKnown RBP15.61■□□□□ 0.09
VPS9D1-201ENST00000389386 ECM1Q16610 540 aa15.61■□□□□ 0.09
VPS9D1-201ENST00000389386 DOK7Q18PE1 504 aa15.61■□□□□ 0.09
VPS9D1-201ENST00000389386 EDRF1Q3B7T1 1238 aa15.61■□□□□ 0.09
VPS9D1-201ENST00000389386 RHBDF2Q6PJF5 856 aa15.61■□□□□ 0.09
VPS9D1-201ENST00000389386 ARMCX6Q7L4S7 300 aa15.61■□□□□ 0.09
VPS9D1-201ENST00000389386 FRMD5Q7Z6J6 570 aa15.61■□□□□ 0.09
VPS9D1-201ENST00000389386 HIC2Q96JB3 615 aa15.61■□□□□ 0.09
VPS9D1-201ENST00000389386 IWS1Q96ST2 819 aa15.61■□□□□ 0.09
VPS9D1-201ENST00000389386 TMEM47Q9BQJ4 181 aa15.61■□□□□ 0.09
VPS9D1-201ENST00000389386 SYNCQ9H7C4 482 aa15.61■□□□□ 0.09
VPS9D1-201ENST00000389386 ZFP69BQ9UJL9 534 aa15.61■□□□□ 0.09
VPS9D1-201ENST00000389386 LAMB1P07942 1786 aa15.61■□□□□ 0.09
VPS9D1-201ENST00000389386 TCRBV7S2A1N4TA0A589 114 aa15.6■□□□□ 0.09
VPS9D1-201ENST00000389386 KLRG2A4D1S0 409 aaPredicted RBP15.6■□□□□ 0.09
VPS9D1-201ENST00000389386 GGPS1O95749 300 aa15.6■□□□□ 0.09
VPS9D1-201ENST00000389386 ETS2P15036 469 aa15.6■□□□□ 0.09
VPS9D1-201ENST00000389386 LMNB1P20700 586 aa15.6■□□□□ 0.09
VPS9D1-201ENST00000389386 HOXA10P31260 410 aaPredicted RBP15.6■□□□□ 0.09
VPS9D1-201ENST00000389386 KCNJ1P48048 391 aa15.6■□□□□ 0.09
VPS9D1-201ENST00000389386 MARCKSL1P49006 195 aa15.6■□□□□ 0.09
VPS9D1-201ENST00000389386 NEK3P51956 506 aa15.6■□□□□ 0.09
VPS9D1-201ENST00000389386 GSTO1P78417 241 aa15.6■□□□□ 0.09
VPS9D1-201ENST00000389386 ORC2Q13416 577 aaPredicted RBP15.6■□□□□ 0.09
VPS9D1-201ENST00000389386 CALCRLQ16602 461 aa15.6■□□□□ 0.09
VPS9D1-201ENST00000389386 HS2ST1Q7LGA3 356 aa15.6■□□□□ 0.09
VPS9D1-201ENST00000389386 CCDC125Q86Z20 511 aa15.6■□□□□ 0.09
VPS9D1-201ENST00000389386 ANKRD35Q8N283 1001 aa15.6■□□□□ 0.09
VPS9D1-201ENST00000389386 CENPKQ9BS16 269 aa15.6■□□□□ 0.09
VPS9D1-201ENST00000389386 GSC2O15499 205 aa15.6■□□□□ 0.09
VPS9D1-201ENST00000389386 BBOX1O75936 387 aa15.6■□□□□ 0.09
VPS9D1-201ENST00000389386 NR2F2P24468 414 aa15.6■□□□□ 0.09
VPS9D1-201ENST00000389386 MAGEA10P43363 369 aaPredicted RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms