RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 PRKCEQ02156 737 aa16.04■□□□□ 0.16
SCFD2-201ENST00000388940 TMEM132BQ14DG7 1078 aa16.04■□□□□ 0.16
SCFD2-201ENST00000388940 GNPTABQ3T906 1256 aa16.04■□□□□ 0.16
SCFD2-201ENST00000388940 MIS18BP1Q6P0N0 1132 aa16.04■□□□□ 0.16
SCFD2-201ENST00000388940 ZDHHC24Q6UX98 284 aa16.04■□□□□ 0.16
SCFD2-201ENST00000388940 CATSPERGQ6ZRH7 1159 aa16.04■□□□□ 0.16
SCFD2-201ENST00000388940 ZNF677Q86XU0 584 aa16.04■□□□□ 0.16
SCFD2-201ENST00000388940 SPATS2Q86XZ4 545 aaKnown RBP16.04■□□□□ 0.16
SCFD2-201ENST00000388940 SLC13A5Q86YT5 568 aaPredicted RBP16.04■□□□□ 0.16
SCFD2-201ENST00000388940 C10orf67Q8IYJ2 551 aa16.04■□□□□ 0.16
SCFD2-201ENST00000388940 ZDHHC14Q8IZN3 488 aa16.04■□□□□ 0.16
SCFD2-201ENST00000388940 C12orf50Q8NA57 414 aaPredicted RBP16.04■□□□□ 0.16
SCFD2-201ENST00000388940 MAGOHBQ96A72 148 aaKnown RBP16.04■□□□□ 0.16
SCFD2-201ENST00000388940 TEX13BQ9BXU2 312 aa16.04■□□□□ 0.16
SCFD2-201ENST00000388940 TRIM31Q9BZY9 425 aa16.04■□□□□ 0.16
SCFD2-201ENST00000388940 ACAD9Q9H845 621 aa16.04■□□□□ 0.16
SCFD2-201ENST00000388940 PARP2Q9UGN5 583 aa16.04■□□□□ 0.16
SCFD2-201ENST00000388940 MTUS1Q9ULD2 1270 aa16.04■□□□□ 0.16
SCFD2-201ENST00000388940 LCTP09848 1927 aa16.04■□□□□ 0.16
SCFD2-201ENST00000388940 ATXN2Q99700 1313 aaKnown RBP16.04■□□□□ 0.16
SCFD2-201ENST00000388940 FAM170AA1A519 330 aa16.03■□□□□ 0.16
SCFD2-201ENST00000388940 NDUFAB1O14561 156 aa16.03■□□□□ 0.16
SCFD2-201ENST00000388940 ATMINO43313 823 aaPredicted RBP16.03■□□□□ 0.16
SCFD2-201ENST00000388940 SPOPO43791 374 aa16.03■□□□□ 0.16
SCFD2-201ENST00000388940 RWDD2BP57060 319 aa16.03■□□□□ 0.16
SCFD2-201ENST00000388940 PSMD6Q15008 389 aa16.03■□□□□ 0.16
SCFD2-201ENST00000388940 B4GALNT4Q76KP1 1039 aa16.03■□□□□ 0.16
SCFD2-201ENST00000388940 DHX38Q92620 1227 aaKnown RBP16.03■□□□□ 0.16
SCFD2-201ENST00000388940 ZKSCAN4Q969J2 545 aaPredicted RBP16.03■□□□□ 0.16
SCFD2-201ENST00000388940 C18orf8Q96DM3 657 aa16.03■□□□□ 0.16
SCFD2-201ENST00000388940 FAM129AQ9BZQ8 928 aa16.03■□□□□ 0.16
SCFD2-201ENST00000388940 POLR3FQ9H1D9 316 aaPredicted RBP16.03■□□□□ 0.16
SCFD2-201ENST00000388940 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.03■□□□□ 0.161e-8■■■■■ 325.5
SCFD2-201ENST00000388940 GRHL1Q9NZI5 618 aa16.03■□□□□ 0.16
SCFD2-201ENST00000388940 RGS17Q9UGC6 210 aaPredicted RBP16.03■□□□□ 0.16
SCFD2-201ENST00000388940 SEPT9Q9UHD8 586 aaPredicted RBP16.03■□□□□ 0.16
SCFD2-201ENST00000388940 MYPNQ86TC9 1320 aa16.03■□□□□ 0.16
SCFD2-201ENST00000388940 LTBP3Q9NS15 1303 aa16.03■□□□□ 0.16
SCFD2-201ENST00000388940 SUPT20HL2P0C7V6 817 aa16.03■□□□□ 0.16
SCFD2-201ENST00000388940 DLATP10515 647 aaKnown RBP16.03■□□□□ 0.16
SCFD2-201ENST00000388940 UNGP13051 313 aaPredicted RBP16.03■□□□□ 0.16
SCFD2-201ENST00000388940 HMGCS2P54868 508 aa16.03■□□□□ 0.16
SCFD2-201ENST00000388940 SUPT20HL1Q3ZLR7 823 aa16.03■□□□□ 0.16
SCFD2-201ENST00000388940 TTC27Q6P3X3 843 aa16.03■□□□□ 0.16
SCFD2-201ENST00000388940 CCDC137Q6PK04 289 aaKnown RBP16.03■□□□□ 0.16
SCFD2-201ENST00000388940 ZNF516Q92618 1163 aa16.03■□□□□ 0.16
SCFD2-201ENST00000388940 WRNIP1Q96S55 665 aa16.03■□□□□ 0.16
SCFD2-201ENST00000388940 FAM213AQ9BRX8 229 aa16.03■□□□□ 0.16
SCFD2-201ENST00000388940 A1CFQ9NQ94 594 aaKnown RBP16.03■□□□□ 0.16
SCFD2-201ENST00000388940 AVENQ9NQS1 362 aaPredicted RBP16.03■□□□□ 0.16
SCFD2-201ENST00000388940 CNOT8Q9UFF9 292 aaKnown RBP16.03■□□□□ 0.16
SCFD2-201ENST00000388940 SLC12A6Q9UHW9 1150 aa16.03■□□□□ 0.16
SCFD2-201ENST00000388940 ATP8A1Q9Y2Q0 1164 aa16.03■□□□□ 0.16
SCFD2-201ENST00000388940 FZD9O00144 591 aa16.02■□□□□ 0.16
SCFD2-201ENST00000388940 ATG7O95352 703 aa16.02■□□□□ 0.16
SCFD2-201ENST00000388940 PIGRP01833 764 aa16.02■□□□□ 0.16
SCFD2-201ENST00000388940 ICAM3P32942 547 aa16.02■□□□□ 0.16
SCFD2-201ENST00000388940 COILP38432 576 aaPredicted RBP16.02■□□□□ 0.16
SCFD2-201ENST00000388940 FNTAP49354 379 aa16.02■□□□□ 0.16
SCFD2-201ENST00000388940 BPIFB4P59827 614 aa16.02■□□□□ 0.16
SCFD2-201ENST00000388940 SIX1Q15475 284 aaPredicted RBP16.02■□□□□ 0.16
SCFD2-201ENST00000388940 PSPC1Q8WXF1 523 aaKnown RBP16.02■□□□□ 0.16
SCFD2-201ENST00000388940 BICD1Q96G01 975 aa16.02■□□□□ 0.16
SCFD2-201ENST00000388940 PLVAPQ9BX97 442 aa16.02■□□□□ 0.16
SCFD2-201ENST00000388940 EPB41L4BQ9H329 900 aa16.02■□□□□ 0.16
SCFD2-201ENST00000388940 PABPC3Q9H361 631 aaKnown RBP16.02■□□□□ 0.16
SCFD2-201ENST00000388940 CHORDC1Q9UHD1 332 aaPredicted RBP16.02■□□□□ 0.16
SCFD2-201ENST00000388940 SNX24Q9Y343 169 aa16.02■□□□□ 0.16
SCFD2-201ENST00000388940 FSCN2O14926 492 aa16.02■□□□□ 0.15
SCFD2-201ENST00000388940 MYBL1P10243 752 aa16.02■□□□□ 0.15
SCFD2-201ENST00000388940 PPP2R2AP63151 447 aa16.02■□□□□ 0.15
SCFD2-201ENST00000388940 ZACNQ401N2 412 aa16.02■□□□□ 0.15
SCFD2-201ENST00000388940 POTEAQ6S8J7 498 aa16.02■□□□□ 0.15
SCFD2-201ENST00000388940 CYFIP1Q7L576 1253 aa16.02■□□□□ 0.15
SCFD2-201ENST00000388940 SLCO2A1Q92959 643 aa16.02■□□□□ 0.15
SCFD2-201ENST00000388940 TRIM11Q96F44 468 aa16.02■□□□□ 0.15
SCFD2-201ENST00000388940 CENPHQ9H3R5 247 aa16.02■□□□□ 0.15
SCFD2-201ENST00000388940 LRRC19Q9H756 370 aa16.02■□□□□ 0.15
SCFD2-201ENST00000388940 C1orf112Q9NSG2 853 aa16.02■□□□□ 0.15
SCFD2-201ENST00000388940 TELO2Q9Y4R8 837 aa16.02■□□□□ 0.15
SCFD2-201ENST00000388940 PCDHB2Q9Y5E7 798 aa16.02■□□□□ 0.15
SCFD2-201ENST00000388940 MAFBQ9Y5Q3 323 aaPredicted RBP16.02■□□□□ 0.15
SCFD2-201ENST00000388940 C4BPAP04003 597 aaKnown RBP16.01■□□□□ 0.15
SCFD2-201ENST00000388940 LIG4P49917 911 aa16.01■□□□□ 0.15
SCFD2-201ENST00000388940 PMS2P54278 862 aa16.01■□□□□ 0.15
SCFD2-201ENST00000388940 PLTPP55058 493 aa16.01■□□□□ 0.15
SCFD2-201ENST00000388940 EMC2Q15006 297 aa16.01■□□□□ 0.15
SCFD2-201ENST00000388940 APOBEC3FQ8IUX4 373 aaKnown RBP16.01■□□□□ 0.15
SCFD2-201ENST00000388940 C3orf20Q8ND61 904 aa16.01■□□□□ 0.15
SCFD2-201ENST00000388940 FBXO25Q8TCJ0 367 aa16.01■□□□□ 0.15
SCFD2-201ENST00000388940 TLCD1Q96CP7 247 aa16.01■□□□□ 0.15
SCFD2-201ENST00000388940 BTBD6Q96KE9 485 aa16.01■□□□□ 0.15
SCFD2-201ENST00000388940 HOXC10Q9NYD6 342 aa16.01■□□□□ 0.15
SCFD2-201ENST00000388940 FAM169AQ9Y6X4 670 aa16.01■□□□□ 0.15
SCFD2-201ENST00000388940 A0A087WUV0 522 aaPredicted RBP16■□□□□ 0.15
SCFD2-201ENST00000388940 RARAP10276 462 aa16■□□□□ 0.15
SCFD2-201ENST00000388940 KRT5P13647 590 aa16■□□□□ 0.15
SCFD2-201ENST00000388940 HPDP32754 393 aaPredicted RBP16■□□□□ 0.15
SCFD2-201ENST00000388940 SLC1A1P43005 524 aa16■□□□□ 0.15
SCFD2-201ENST00000388940 RPL21P46778 160 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms