RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 WNT16Q9UBV4 365 aa-1.66□□□□□ -2.68
RNU6-1340P-201ENST00000384438 SERGEFQ9UGK8 458 aa-1.66□□□□□ -2.68
RNU6-1340P-201ENST00000384438 ZNF180Q9UJW8 692 aa-1.66□□□□□ -2.68
RNU6-1340P-201ENST00000384438 SUFUQ9UMX1 484 aa-1.66□□□□□ -2.68
RNU6-1340P-201ENST00000384438 WASF3Q9UPY6 502 aa-1.66□□□□□ -2.68
RNU6-1340P-201ENST00000384438 PCDHB15Q9Y5E8 787 aa-1.66□□□□□ -2.68
RNU6-1340P-201ENST00000384438 GAGE12BA1L429 117 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 GAGE12HA6NDE8 117 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 UNC119BA6NIH7 251 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 C22orf46C9J442 243 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 CBX4O00257 560 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 SLC16A5O15375 505 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 STRNO43815 780 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 TULP3O75386 442 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 NCR1O76036 304 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 KDM4BO94953 1096 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 KLKB1P03952 638 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 CHGBP05060 677 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 HOXB7P09629 217 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 WEE2P0C1S8 567 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 ELFN1P0C7U0 828 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 NHLRC4P0CG21 123 aaPredicted RBP-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 ITGAMP11215 1152 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 FGF5P12034 268 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 TRIM27P14373 513 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 GYPEP15421 78 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 UBA1P22314 1058 aaKnown RBP-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 CAP2P40123 477 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 LHX1P48742 406 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 ACSM2AQ08AH3 577 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 PPIGQ13427 754 aaKnown RBP eCLIP-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 MOGSQ13724 837 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 SLBPQ14493 270 aaKnown RBP eCLIP-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 KIF22Q14807 665 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 ZNF74Q16587 644 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 MAP7D1Q3KQU3 841 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 EGFLAMQ63HQ2 1017 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 SUMO4Q6EEV6 95 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 METTL7BQ6UX53 244 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 ZC3H18Q86VM9 953 aaKnown RBP-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 FAM72BQ86X60 149 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 CNGA4Q8IV77 575 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 SLC9A9Q8IVB4 645 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 ALDH16A1Q8IZ83 802 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 CCDC71LQ8N9Z2 235 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 MFSD2AQ8NA29 543 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 LINC00116Q8NCU8 138 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 ELP5Q8TE02 316 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 SCG3Q8WXD2 468 aaKnown RBP-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 PEX11GQ96HA9 241 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 CCDC85AQ96PX6 553 aaPredicted RBP-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 RSPO3Q9BXY4 272 aaPredicted RBP-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 ZSWIM4Q9H7M6 989 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 KANSL2Q9H9L4 492 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 DONSONQ9NYP3 566 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 HEY2Q9UBP5 337 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 B4GALT7Q9UBV7 327 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 COL12A1Q99715 3063 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 DIDO1Q9BTC0 2240 aaKnown RBP-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 UMODL1Q5DID0 1318 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 MICAL3Q7RTP6 2002 aa-1.67□□□□□ -2.68
RNU6-1340P-201ENST00000384438 KIF26AQ9ULI4 1882 aaPredicted RBP-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 WI2-2373I1.2A0A1W2PRP0 233 aa-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 E9PQ18 207 aa-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 RNASET2O00584 256 aaKnown RBP-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 RGL2O15211 777 aa-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 SPTLC2O15270 562 aa-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 BUB3O43684 328 aa-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 NRP2O60462 931 aa-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 CYP2E1P05181 493 aaPredicted RBP-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 ZNF19P17023 458 aa-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 NPR3P17342 541 aa-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 ALDH1B1P30837 517 aa-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 CLCN1P35523 988 aa-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 OPRD1P41143 372 aa-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 CCR10P46092 362 aa-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 ME1P48163 572 aa-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 CLK1P49759 484 aaKnown RBP-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 ANXA11P50995 505 aaKnown RBP-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 DGKQP52824 942 aa-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 HGFACQ04756 655 aa-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 FPGSQ05932 587 aa-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 ARL16Q0P5N6 197 aa-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 USP4Q13107 963 aa-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 PRR30Q53SZ7 412 aaPredicted RBP-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 ZMAT1Q5H9K5 638 aa-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 TBCELQ5QJ74 424 aa-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 TSTD2Q5T7W7 516 aa-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 FAAP20Q6NZ36 180 aa-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 Q6P435 159 aa-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 TRIM65Q6PJ69 517 aa-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 CATSPERGQ6ZRH7 1159 aa-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 H1FNTQ75WM6 255 aaPredicted RBP-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 NCAPG2Q86XI2 1143 aa-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 HPS6Q86YV9 775 aa-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 EPHX4Q8IUS5 362 aa-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 MMAAQ8IVH4 418 aaKnown RBP-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 SLC39A11Q8N1S5 342 aa-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 ZCCHC24Q8N2G6 241 aaKnown RBP-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 LMNTD1Q8N9Z9 388 aa-1.68□□□□□ -2.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms