RNA–Protein interactions for RNA: ENST00000383991.1

RNU6-546P-201, Transcript of RNA, U6 small nuclear 546, pseudogene, humanhuman

BASIC

Gene RNU6-546P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-546P-201ENST00000383991 HTRA4P83105 476 aaPredicted RBP2.75□□□□□ -1.97
RNU6-546P-201ENST00000383991 SRSF3P84103 164 aaKnown RBP2.75□□□□□ -1.97
RNU6-546P-201ENST00000383991 TOP3AQ13472 1001 aaPredicted RBP2.75□□□□□ -1.97
RNU6-546P-201ENST00000383991 MTM1Q13496 603 aa2.75□□□□□ -1.97
RNU6-546P-201ENST00000383991 ELF2Q15723 593 aa2.75□□□□□ -1.97
RNU6-546P-201ENST00000383991 FLYWCH1Q4VC44 716 aa2.75□□□□□ -1.97
RNU6-546P-201ENST00000383991 ALFQ53S48 1182 aa2.75□□□□□ -1.97
RNU6-546P-201ENST00000383991 KHDC1LQ5JSQ8 128 aa2.75□□□□□ -1.97
RNU6-546P-201ENST00000383991 EMC10Q5UCC4 262 aa2.75□□□□□ -1.97
RNU6-546P-201ENST00000383991 HIBCHQ6NVY1 386 aaPredicted RBP2.75□□□□□ -1.97
RNU6-546P-201ENST00000383991 PPP1R3BQ86XI6 285 aa2.75□□□□□ -1.97
RNU6-546P-201ENST00000383991 FAM90A1Q86YD7 464 aa2.75□□□□□ -1.97
RNU6-546P-201ENST00000383991 TRMT2AQ8IZ69 625 aaKnown RBP2.75□□□□□ -1.97
RNU6-546P-201ENST00000383991 CELF5Q8N6W0 485 aaKnown RBP2.75□□□□□ -1.97
RNU6-546P-201ENST00000383991 CCHCR1Q8TD31 782 aa2.75□□□□□ -1.97
RNU6-546P-201ENST00000383991 BRIX1Q8TDN6 353 aaKnown RBP2.75□□□□□ -1.97
RNU6-546P-201ENST00000383991 KBTBD7Q8WVZ9 684 aa2.75□□□□□ -1.97
RNU6-546P-201ENST00000383991 CASKIN2Q8WXE0 1202 aa2.75□□□□□ -1.97
RNU6-546P-201ENST00000383991 CCT6BQ92526 530 aa2.75□□□□□ -1.97
RNU6-546P-201ENST00000383991 GFM2Q969S9 779 aaKnown RBP2.75□□□□□ -1.97
RNU6-546P-201ENST00000383991 ZSWIM3Q96MP5 696 aa2.75□□□□□ -1.97
RNU6-546P-201ENST00000383991 NOX5Q96PH1 765 aa2.75□□□□□ -1.97
RNU6-546P-201ENST00000383991 UHRF1Q96T88 793 aaPredicted RBP2.75□□□□□ -1.97
RNU6-546P-201ENST00000383991 ISCA1Q9BUE6 129 aa2.75□□□□□ -1.97
RNU6-546P-201ENST00000383991 TTLL2Q9BWV7 592 aa2.75□□□□□ -1.97
RNU6-546P-201ENST00000383991 TRIM54Q9BYV2 358 aa2.75□□□□□ -1.97
RNU6-546P-201ENST00000383991 DPH1Q9BZG8 443 aa2.75□□□□□ -1.97
RNU6-546P-201ENST00000383991 MRPL46Q9H2W6 279 aaKnown RBP2.75□□□□□ -1.97
RNU6-546P-201ENST00000383991 LDAHQ9H6V9 325 aa2.75□□□□□ -1.97
RNU6-546P-201ENST00000383991 TLR9Q9NR96 1032 aa2.75□□□□□ -1.97
RNU6-546P-201ENST00000383991 CNNM1Q9NRU3 951 aa2.75□□□□□ -1.97
RNU6-546P-201ENST00000383991 LANCL2Q9NS86 450 aa2.75□□□□□ -1.97
RNU6-546P-201ENST00000383991 PCMTD2Q9NV79 361 aa2.75□□□□□ -1.97
RNU6-546P-201ENST00000383991 PIH1D1Q9NWS0 290 aaKnown RBP2.75□□□□□ -1.97
RNU6-546P-201ENST00000383991 GPRC5DQ9NZD1 345 aa2.75□□□□□ -1.97
RNU6-546P-201ENST00000383991 CAMSAP3Q9P1Y5 1249 aaPredicted RBP2.75□□□□□ -1.97
RNU6-546P-201ENST00000383991 CPNE7Q9UBL6 633 aa2.75□□□□□ -1.97
RNU6-546P-201ENST00000383991 PGAP2Q9UHJ9 254 aa2.75□□□□□ -1.97
RNU6-546P-201ENST00000383991 CPA4Q9UI42 421 aa2.75□□□□□ -1.97
RNU6-546P-201ENST00000383991 CDC42EP3Q9UKI2 254 aa2.75□□□□□ -1.97
RNU6-546P-201ENST00000383991 PCDHA6Q9UN73 950 aa2.75□□□□□ -1.97
RNU6-546P-201ENST00000383991 LZTS1Q9Y250 596 aa2.75□□□□□ -1.97
RNU6-546P-201ENST00000383991 PCDHGB3Q9Y5G1 929 aa2.75□□□□□ -1.97
RNU6-546P-201ENST00000383991 PCDHGB2Q9Y5G2 931 aa2.75□□□□□ -1.97
RNU6-546P-201ENST00000383991 PCDHA1Q9Y5I3 950 aa2.75□□□□□ -1.97
RNU6-546P-201ENST00000383991 A0A1W2PPC4 97 aa2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 C2orf78A6NCI8 922 aa2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 APOL1O14791 398 aa2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 MTSS1O43312 755 aa2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 GPR32O75388 356 aa2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 ALDH1A2O94788 518 aa2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 PARP1P09874 1014 aaKnown RBP2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 HARSP12081 509 aaKnown RBP2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 HSD3B1P14060 373 aa2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 PCSK1P29120 753 aa2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 KIR2DL3P43628 341 aa2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 HSPA7P48741 367 aa2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 FLT3LGP49771 235 aa2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 KCNQ1P51787 676 aa2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 MAPK10P53779 464 aa2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 NCKAP1LP55160 1127 aa2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 MLLT6P55198 1093 aaPredicted RBP2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 FOXO4P98177 505 aa2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 ICA1Q05084 483 aa2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 SMAD4Q13485 552 aaKnown RBP2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 BIRC3Q13489 604 aa2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 PMS2P11Q13670 270 aa2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 BLMHQ13867 455 aa2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 PUM3Q15397 648 aaKnown RBP2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 MPEG1Q2M385 716 aa2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 ARL13BQ3SXY8 428 aa2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 PRR31Q5SQ13 230 aa2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 CIAPIN1Q6FI81 312 aa2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 CCDC70Q6NSX1 233 aa2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 PGBD2Q6P3X8 592 aa2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 LARP4Q71RC2 724 aaKnown RBP eCLIP2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 CBLL1Q75N03 491 aa2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 ZNF605Q86T29 641 aa2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 ZSWIM9Q86XI8 627 aa2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 LIX1LQ8IVB5 337 aa2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 SYTL1Q8IYJ3 562 aa2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 ABI1Q8IZP0 508 aa2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 CCDC33Q8N5R6 958 aa2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 MYCT1Q8N699 235 aa2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 PAF1Q8N7H5 531 aa2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 ATP11CQ8NB49 1132 aa2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 PLA2G15Q8NCC3 412 aa2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 MZB1Q8WU39 189 aa2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 NMD3Q96D46 503 aaKnown RBP2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 BRIP1Q9BX63 1249 aa2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 SENP6Q9GZR1 1112 aaPredicted RBP2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 KATNBL1Q9H079 304 aa2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 ADAM7Q9H2U9 754 aa2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 TMEM140Q9NV12 185 aa2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 SIRT5Q9NXA8 310 aa2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 SIDT1Q9NXL6 827 aaKnown RBP2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 ING3Q9NXR8 418 aa2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 STK32BQ9NY57 414 aa2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 C9orf78Q9NZ63 289 aaPredicted RBP2.74□□□□□ -1.97
RNU6-546P-201ENST00000383991 COL20A1Q9P218 1284 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms