RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 SERINC3Q13530 473 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 ZRSR1Q15695 479 aaKnown RBP4.23□□□□□ -1.73
SMC6-202ENST00000381272 SOGA3Q5TF21 947 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 KRT40Q6A162 431 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 TEPPQ6URK8 271 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 OTOP3Q7RTS5 596 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 BRAPQ7Z569 592 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 STK32CQ86UX6 486 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 CXorf38Q8TB03 319 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 KCNG4Q8TDN1 519 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 ANKRD7Q92527 254 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 CHMP4CQ96CF2 233 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 CLIC6Q96NY7 704 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 KCNJ15Q99712 375 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 XPO4Q9C0E2 1151 aaKnown RBP4.23□□□□□ -1.73
SMC6-202ENST00000381272 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.23□□□□□ -1.736e-6■■■□□ 19.2
SMC6-202ENST00000381272 NAT10Q9H0A0 1025 aaKnown RBP4.23□□□□□ -1.73
SMC6-202ENST00000381272 ADAM7Q9H2U9 754 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 IFNKQ9P0W0 207 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 ASH2LQ9UBL3 628 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 CHD4Q14839 1912 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 ABCA3Q99758 1704 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 ZMYM6O95789 1325 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 NEDD4P46934 1319 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 TRBV23-1A0A0A0MS06 115 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 TCRBV5S4A2TA0A5A2 114 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 FAM47E-STBD1D6RA91 191 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 PRRG2O14669 202 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 PRKAB2O43741 272 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 RANBP6O60518 1105 aaKnown RBP4.23□□□□□ -1.73
SMC6-202ENST00000381272 PDE8BO95263 885 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 SOD2P04179 222 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 CYP19A1P11511 503 aaPredicted RBP4.23□□□□□ -1.73
SMC6-202ENST00000381272 PDE6AP16499 860 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 SYN1P17600 705 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 CMA1P23946 247 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 SUMO1P63165 101 aaKnown RBP4.23□□□□□ -1.73
SMC6-202ENST00000381272 RBM6P78332 1123 aaKnown RBP4.23□□□□□ -1.73
SMC6-202ENST00000381272 NCBP1Q09161 790 aaKnown RBP4.23□□□□□ -1.73
SMC6-202ENST00000381272 SLC39A14Q15043 492 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 PTPN14Q15678 1187 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 PTPN21Q16825 1174 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 SPECC1Q5M775 1068 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 APOA5Q6Q788 366 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 SHC4Q6S5L8 630 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 MICU3Q86XE3 530 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 ZNF761Q86XN6 746 aaPredicted RBP4.23□□□□□ -1.73
SMC6-202ENST00000381272 MAGEB6Q8N7X4 407 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 VGLL2Q8N8G2 317 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 CCDC112Q8NEF3 446 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 IGDCC4Q8TDY8 1250 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 STRBPQ96SI9 672 aaKnown RBP4.23□□□□□ -1.73
SMC6-202ENST00000381272 SLC26A6Q9BXS9 759 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 TEX13AQ9BXU3 409 aaPredicted RBP4.23□□□□□ -1.73
SMC6-202ENST00000381272 ARMT1Q9H993 441 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.23□□□□□ -1.73
SMC6-202ENST00000381272 ZBTB1Q9Y2K1 713 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 PAXBP1Q9Y5B6 917 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 V9GYY5 206 aaPredicted RBP4.23□□□□□ -1.73
SMC6-202ENST00000381272 ANKRD36CQ5JPF3 1778 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 NCANO14594 1321 aa4.22□□□□□ -1.73
SMC6-202ENST00000381272 WDR19Q8NEZ3 1342 aa4.22□□□□□ -1.73
SMC6-202ENST00000381272 CDHR2Q9BYE9 1310 aa4.22□□□□□ -1.73
SMC6-202ENST00000381272 GOLGA8AA7E2F4 631 aa4.22□□□□□ -1.73
SMC6-202ENST00000381272 AQP7O14520 342 aa4.22□□□□□ -1.73
SMC6-202ENST00000381272 IFIT3O14879 490 aaKnown RBP4.22□□□□□ -1.73
SMC6-202ENST00000381272 ZBTB43O43298 467 aa4.22□□□□□ -1.73
SMC6-202ENST00000381272 NOBOXO60393 691 aa4.22□□□□□ -1.73
SMC6-202ENST00000381272 NEMFO60524 1076 aa4.22□□□□□ -1.73
SMC6-202ENST00000381272 PDE8AO60658 829 aa4.22□□□□□ -1.73
SMC6-202ENST00000381272 MBD4O95243 580 aa4.22□□□□□ -1.73
SMC6-202ENST00000381272 COL6A2P12110 1019 aa4.22□□□□□ -1.73
SMC6-202ENST00000381272 ATP1A3P13637 1013 aa4.22□□□□□ -1.73
SMC6-202ENST00000381272 GUCY1A2P33402 732 aa4.22□□□□□ -1.73
SMC6-202ENST00000381272 IARSP41252 1262 aaKnown RBP4.22□□□□□ -1.73
SMC6-202ENST00000381272 SYKP43405 635 aa4.22□□□□□ -1.73
SMC6-202ENST00000381272 GOLGA8FQ08AF8 430 aa4.22□□□□□ -1.73
SMC6-202ENST00000381272 GOLGA8DPQ0D2H9 430 aa4.22□□□□□ -1.73
SMC6-202ENST00000381272 ADAM9Q13443 819 aa4.22□□□□□ -1.73
SMC6-202ENST00000381272 PNOCQ13519 176 aa4.22□□□□□ -1.73
SMC6-202ENST00000381272 PTPAQ15257 358 aa4.22□□□□□ -1.73
SMC6-202ENST00000381272 TTF1Q15361 905 aaPredicted RBP4.22□□□□□ -1.73
SMC6-202ENST00000381272 UBE3CQ15386 1083 aa4.22□□□□□ -1.73
SMC6-202ENST00000381272 LONRF2Q1L5Z9 754 aa4.22□□□□□ -1.73
SMC6-202ENST00000381272 RRP12Q5JTH9 1297 aaKnown RBP4.22□□□□□ -1.73
SMC6-202ENST00000381272 FAM209AQ5JX71 171 aa4.22□□□□□ -1.73
SMC6-202ENST00000381272 ARMCX5Q6P1M9 558 aa4.22□□□□□ -1.73
SMC6-202ENST00000381272 MAMDC2Q7Z304 686 aaPredicted RBP4.22□□□□□ -1.73
SMC6-202ENST00000381272 CCAR2Q8N163 923 aaKnown RBP4.22□□□□□ -1.73
SMC6-202ENST00000381272 SPATA5Q8NB90 893 aa4.22□□□□□ -1.73
SMC6-202ENST00000381272 ADAMTS17Q8TE56 1095 aa4.22□□□□□ -1.73
SMC6-202ENST00000381272 DPF2Q92785 391 aa4.22□□□□□ -1.73
SMC6-202ENST00000381272 PTPRN2Q92932 1015 aa4.22□□□□□ -1.73
SMC6-202ENST00000381272 DEPDC7Q96QD5 511 aa4.22□□□□□ -1.73
SMC6-202ENST00000381272 MAP3K14Q99558 947 aa4.22□□□□□ -1.73
SMC6-202ENST00000381272 LY9Q9HBG7 655 aa4.22□□□□□ -1.73
SMC6-202ENST00000381272 TOMM22Q9NS69 142 aa4.22□□□□□ -1.73
SMC6-202ENST00000381272 HSPBP1Q9NZL4 362 aa4.22□□□□□ -1.73
SMC6-202ENST00000381272 KCNJ14Q9UNX9 436 aa4.22□□□□□ -1.73
SMC6-202ENST00000381272 TRAF6Q9Y4K3 522 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms