RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 TNFRSF25Q93038 417 aa17.66■□□□□ 0.42
VCX3A-201ENST00000381089 NACC1Q96RE7 527 aa17.66■□□□□ 0.42
VCX3A-201ENST00000381089 PAAF1Q9BRP4 392 aa17.66■□□□□ 0.42
VCX3A-201ENST00000381089 FOXQ1Q9C009 403 aa17.66■□□□□ 0.42
VCX3A-201ENST00000381089 FZD8Q9H461 694 aa17.66■□□□□ 0.42
VCX3A-201ENST00000381089 TUFT1Q9NNX1 390 aa17.66■□□□□ 0.42
VCX3A-201ENST00000381089 GPRC5CQ9NQ84 441 aa17.66■□□□□ 0.42
VCX3A-201ENST00000381089 SNTG2Q9NY99 539 aa17.66■□□□□ 0.42
VCX3A-201ENST00000381089 CACNG4Q9UBN1 327 aa17.66■□□□□ 0.42
VCX3A-201ENST00000381089 KANSL1LA0AUZ9 987 aa17.65■□□□□ 0.42
VCX3A-201ENST00000381089 RECQL4O94761 1208 aa17.65■□□□□ 0.42
VCX3A-201ENST00000381089 CTDNEP1O95476 244 aa17.65■□□□□ 0.42
VCX3A-201ENST00000381089 MAGEA9P43362 315 aa17.65■□□□□ 0.42
VCX3A-201ENST00000381089 SNW1Q13573 536 aaKnown RBP17.65■□□□□ 0.42
VCX3A-201ENST00000381089 PPP2R5AQ15172 486 aa17.65■□□□□ 0.42
VCX3A-201ENST00000381089 MLF2Q15773 248 aaPredicted RBP17.65■□□□□ 0.42
VCX3A-201ENST00000381089 AXDND1Q5T1B0 1012 aaPredicted RBP17.65■□□□□ 0.42
VCX3A-201ENST00000381089 RSPO2Q6UXX9 243 aaPredicted RBP17.65■□□□□ 0.42
VCX3A-201ENST00000381089 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.65■□□□□ 0.42
VCX3A-201ENST00000381089 DGLUCYQ7Z3D6 616 aa17.65■□□□□ 0.42
VCX3A-201ENST00000381089 ST13P5Q8NFI4 369 aaPredicted RBP17.65■□□□□ 0.42
VCX3A-201ENST00000381089 ERMNQ8TAM6 284 aa17.65■□□□□ 0.42
VCX3A-201ENST00000381089 SLC7A14Q8TBB6 771 aa17.65■□□□□ 0.42
VCX3A-201ENST00000381089 PDZD7Q9H5P4 517 aa17.65■□□□□ 0.42
VCX3A-201ENST00000381089 SPATA6Q9NWH7 488 aaPredicted RBP17.65■□□□□ 0.42
VCX3A-201ENST00000381089 KCNH3Q9ULD8 1083 aa17.65■□□□□ 0.42
VCX3A-201ENST00000381089 MIA3Q5JRA6 1907 aa17.64■□□□□ 0.42
VCX3A-201ENST00000381089 POTEMA6NI47 508 aa17.64■□□□□ 0.41
VCX3A-201ENST00000381089 PTGESO14684 152 aa17.64■□□□□ 0.41
VCX3A-201ENST00000381089 LAMTOR5O43504 91 aa17.64■□□□□ 0.41
VCX3A-201ENST00000381089 TRAPPC3O43617 180 aa17.64■□□□□ 0.41
VCX3A-201ENST00000381089 PRKCBP05771 671 aa17.64■□□□□ 0.41
VCX3A-201ENST00000381089 NTHL1P78549 312 aa17.64■□□□□ 0.41
VCX3A-201ENST00000381089 RAB33AQ14088 237 aa17.64■□□□□ 0.41
VCX3A-201ENST00000381089 PUM1Q14671 1186 aaKnown RBP eCLIP17.64■□□□□ 0.41
VCX3A-201ENST00000381089 UBXN2BQ14CS0 331 aa17.64■□□□□ 0.41
VCX3A-201ENST00000381089 ZNF528Q3MIS6 628 aa17.64■□□□□ 0.41
VCX3A-201ENST00000381089 DCAF4L1Q3SXM0 396 aa17.64■□□□□ 0.41
VCX3A-201ENST00000381089 PABPC1LQ4VXU2 614 aaKnown RBP17.64■□□□□ 0.41
VCX3A-201ENST00000381089 SLC44A4Q53GD3 710 aa17.64■□□□□ 0.41
VCX3A-201ENST00000381089 POTEGQ6S5H5 508 aa17.64■□□□□ 0.41
VCX3A-201ENST00000381089 DIS3L2Q8IYB7 885 aaKnown RBP17.64■□□□□ 0.41
VCX3A-201ENST00000381089 DEPTORQ8TB45 409 aa17.64■□□□□ 0.41
VCX3A-201ENST00000381089 RMDN1Q96DB5 314 aa17.64■□□□□ 0.41
VCX3A-201ENST00000381089 MTMR9Q96QG7 549 aa17.64■□□□□ 0.41
VCX3A-201ENST00000381089 RPP25Q9BUL9 199 aaKnown RBP17.64■□□□□ 0.41
VCX3A-201ENST00000381089 OSBPL6Q9BZF3 934 aa17.64■□□□□ 0.41
VCX3A-201ENST00000381089 FBXO4Q9UKT5 387 aa17.64■□□□□ 0.41
VCX3A-201ENST00000381089 MYH15Q9Y2K3 1946 aa17.64■□□□□ 0.41
VCX3A-201ENST00000381089 CACNA1AO00555 2505 aa17.63■□□□□ 0.41
VCX3A-201ENST00000381089 A0A087WWV3 80 aa17.63■□□□□ 0.41
VCX3A-201ENST00000381089 ARHGEF35A5YM69 484 aa17.63■□□□□ 0.41
VCX3A-201ENST00000381089 BTBD18B2RXH4 712 aa17.63■□□□□ 0.41
VCX3A-201ENST00000381089 ACKR2O00590 384 aa17.63■□□□□ 0.41
VCX3A-201ENST00000381089 NCAM2O15394 837 aa17.63■□□□□ 0.41
VCX3A-201ENST00000381089 LIG1P18858 919 aa17.63■□□□□ 0.41
VCX3A-201ENST00000381089 OR1D2P34982 312 aa17.63■□□□□ 0.41
VCX3A-201ENST00000381089 NAMPTP43490 491 aa17.63■□□□□ 0.41
VCX3A-201ENST00000381089 RBM25P49756 843 aaKnown RBP17.63■□□□□ 0.41
VCX3A-201ENST00000381089 ANAPC15P60006 121 aa17.63■□□□□ 0.41
VCX3A-201ENST00000381089 NOSTRINQ8IVI9 506 aa17.63■□□□□ 0.41
VCX3A-201ENST00000381089 IFT74Q96LB3 600 aa17.63■□□□□ 0.41
VCX3A-201ENST00000381089 UROC1Q96N76 676 aa17.63■□□□□ 0.41
VCX3A-201ENST00000381089 POLR3CQ9BUI4 534 aaPredicted RBP17.63■□□□□ 0.41
VCX3A-201ENST00000381089 FANCMQ8IYD8 2048 aa17.62■□□□□ 0.41
VCX3A-201ENST00000381089 TMEM189-UBE2V1I3L0A0 370 aa17.62■□□□□ 0.41
VCX3A-201ENST00000381089 SPTLC1O15269 473 aa17.62■□□□□ 0.41
VCX3A-201ENST00000381089 DTNBO60941 627 aa17.62■□□□□ 0.41
VCX3A-201ENST00000381089 B3GAT3O94766 335 aa17.62■□□□□ 0.41
VCX3A-201ENST00000381089 SPATA31C1P0DKV0 1188 aa17.62■□□□□ 0.41
VCX3A-201ENST00000381089 FDPSP14324 419 aaKnown RBP17.62■□□□□ 0.41
VCX3A-201ENST00000381089 GLULP15104 373 aa17.62■□□□□ 0.41
VCX3A-201ENST00000381089 EFNA5P52803 228 aa17.62■□□□□ 0.41
VCX3A-201ENST00000381089 SAFBQ15424 915 aaKnown RBP eCLIP17.62■□□□□ 0.41
VCX3A-201ENST00000381089 PADI6Q6TGC4 694 aa17.62■□□□□ 0.41
VCX3A-201ENST00000381089 CATSPER3Q86XQ3 398 aa17.62■□□□□ 0.41
VCX3A-201ENST00000381089 ITFG1Q8TB96 612 aa17.62■□□□□ 0.41
VCX3A-201ENST00000381089 SECISBP2LQ93073 1101 aaKnown RBP17.62■□□□□ 0.41
VCX3A-201ENST00000381089 GTF3C6Q969F1 213 aa17.62■□□□□ 0.41
VCX3A-201ENST00000381089 NELL2Q99435 816 aa17.62■□□□□ 0.41
VCX3A-201ENST00000381089 DDX23Q9BUQ8 820 aaKnown RBP17.62■□□□□ 0.41
VCX3A-201ENST00000381089 MTRRQ9UBK8 725 aa17.62■□□□□ 0.41
VCX3A-201ENST00000381089 GDAQ9Y2T3 454 aa17.62■□□□□ 0.41
VCX3A-201ENST00000381089 MRPS23Q9Y3D9 190 aaKnown RBP17.62■□□□□ 0.41
VCX3A-201ENST00000381089 DMXL1Q9Y485 3027 aa17.62■□□□□ 0.41
VCX3A-201ENST00000381089 DOCK6Q96HP0 2047 aa17.62■□□□□ 0.41
VCX3A-201ENST00000381089 CACNA1IQ9P0X4 2223 aa17.62■□□□□ 0.41
VCX3A-201ENST00000381089 FAM170BA6NMN3 283 aa17.61■□□□□ 0.41
VCX3A-201ENST00000381089 ADAM12O43184 909 aa17.61■□□□□ 0.41
VCX3A-201ENST00000381089 CYP11B2P19099 503 aa17.61■□□□□ 0.41
VCX3A-201ENST00000381089 FGFR3P22607 806 aa17.61■□□□□ 0.41
VCX3A-201ENST00000381089 MCM7P33993 719 aa17.61■□□□□ 0.41
VCX3A-201ENST00000381089 ZBTB41Q5SVQ8 909 aa17.61■□□□□ 0.41
VCX3A-201ENST00000381089 ANKS3Q6ZW76 656 aa17.61■□□□□ 0.41
VCX3A-201ENST00000381089 NPAS3Q8IXF0 933 aa17.61■□□□□ 0.41
VCX3A-201ENST00000381089 NECAB1Q8N987 351 aa17.61■□□□□ 0.41
VCX3A-201ENST00000381089 ATRIPQ8WXE1 791 aa17.61■□□□□ 0.41
VCX3A-201ENST00000381089 KXD1Q9BQD3 176 aa17.61■□□□□ 0.41
VCX3A-201ENST00000381089 GDE1Q9NZC3 331 aa17.61■□□□□ 0.41
VCX3A-201ENST00000381089 NCDNQ9UBB6 729 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms