RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 CAPSQ13938 189 aa15.34■□□□□ 0.05
CLCN4-201ENST00000380829 CELF3Q5SZQ8 465 aaKnown RBP15.34■□□□□ 0.05
CLCN4-201ENST00000380829 PI4K2AQ9BTU6 479 aa15.34■□□□□ 0.05
CLCN4-201ENST00000380829 TARS2Q9BW92 718 aaKnown RBP15.34■□□□□ 0.05
CLCN4-201ENST00000380829 RAB20Q9NX57 234 aa15.34■□□□□ 0.05
CLCN4-201ENST00000380829 IQCA1LA6NCM1 817 aa15.33■□□□□ 0.04
CLCN4-201ENST00000380829 NEBLO76041 1014 aa15.33■□□□□ 0.04
CLCN4-201ENST00000380829 SGPL1O95470 568 aa15.33■□□□□ 0.04
CLCN4-201ENST00000380829 ZBTB41Q5SVQ8 909 aa15.33■□□□□ 0.04
CLCN4-201ENST00000380829 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.33■□□□□ 0.04
CLCN4-201ENST00000380829 ZNF572Q7Z3I7 529 aaPredicted RBP15.33■□□□□ 0.04
CLCN4-201ENST00000380829 USP37Q86T82 979 aa15.33■□□□□ 0.04
CLCN4-201ENST00000380829 EGFL6Q8IUX8 553 aa15.33■□□□□ 0.04
CLCN4-201ENST00000380829 SPATA33Q96N06 139 aa15.33■□□□□ 0.04
CLCN4-201ENST00000380829 MROH8Q9H579 483 aa15.33■□□□□ 0.04
CLCN4-201ENST00000380829 AGO2Q9UKV8 859 aaKnown RBP15.33■□□□□ 0.04
CLCN4-201ENST00000380829 INTUQ9ULD6 942 aa15.33■□□□□ 0.04
CLCN4-201ENST00000380829 COQ4Q9Y3A0 265 aa15.33■□□□□ 0.04
CLCN4-201ENST00000380829 CYP26A1O43174 497 aa15.33■□□□□ 0.04
CLCN4-201ENST00000380829 EXTL3O43909 919 aa15.33■□□□□ 0.04
CLCN4-201ENST00000380829 MAFO75444 373 aaPredicted RBP15.33■□□□□ 0.04
CLCN4-201ENST00000380829 FSBPO95073 299 aa15.33■□□□□ 0.04
CLCN4-201ENST00000380829 GPC3P51654 580 aa15.33■□□□□ 0.04
CLCN4-201ENST00000380829 IFI16Q16666 785 aaKnown RBP15.33■□□□□ 0.04
CLCN4-201ENST00000380829 SND1Q7KZF4 910 aaKnown RBP eCLIP15.33■□□□□ 0.04
CLCN4-201ENST00000380829 RPUSD2Q8IZ73 545 aaKnown RBP15.33■□□□□ 0.04
CLCN4-201ENST00000380829 LRRC71Q8N4P6 559 aa15.33■□□□□ 0.04
CLCN4-201ENST00000380829 SH2D3CQ8N5H7 860 aa15.33■□□□□ 0.04
CLCN4-201ENST00000380829 HELQQ8TDG4 1101 aa15.33■□□□□ 0.04
CLCN4-201ENST00000380829 PRPF31Q8WWY3 499 aaKnown RBP15.33■□□□□ 0.04
CLCN4-201ENST00000380829 ZNF516Q92618 1163 aa15.33■□□□□ 0.04
CLCN4-201ENST00000380829 TATDN2Q93075 761 aa15.33■□□□□ 0.04
CLCN4-201ENST00000380829 ARHGEF26Q96DR7 871 aa15.33■□□□□ 0.04
CLCN4-201ENST00000380829 THAP2Q9H0W7 228 aa15.33■□□□□ 0.04
CLCN4-201ENST00000380829 RBM12Q9NTZ6 932 aaKnown RBP15.33■□□□□ 0.04
CLCN4-201ENST00000380829 MEFVO15553 781 aaPredicted RBP15.32■□□□□ 0.04
CLCN4-201ENST00000380829 ZEB2O60315 1214 aa15.32■□□□□ 0.04
CLCN4-201ENST00000380829 HARSP12081 509 aaKnown RBP15.32■□□□□ 0.04
CLCN4-201ENST00000380829 MFAP3P55082 362 aa15.32■□□□□ 0.04
CLCN4-201ENST00000380829 RPS6KA1Q15418 735 aa15.32■□□□□ 0.04
CLCN4-201ENST00000380829 CFAP221Q4G0U5 840 aa15.32■□□□□ 0.04
CLCN4-201ENST00000380829 SEZ6Q53EL9 994 aa15.32■□□□□ 0.04
CLCN4-201ENST00000380829 TTMPQ5BVD1 217 aa15.32■□□□□ 0.04
CLCN4-201ENST00000380829 NOP9Q86U38 636 aaKnown RBP15.32■□□□□ 0.04
CLCN4-201ENST00000380829 SLC47A2Q86VL8 602 aa15.32■□□□□ 0.04
CLCN4-201ENST00000380829 KIRREL3Q8IZU9 778 aa15.32■□□□□ 0.04
CLCN4-201ENST00000380829 SLC35G2Q8TBE7 412 aa15.32■□□□□ 0.04
CLCN4-201ENST00000380829 HDAC7Q8WUI4 952 aa15.32■□□□□ 0.04
CLCN4-201ENST00000380829 PSPC1Q8WXF1 523 aaKnown RBP15.32■□□□□ 0.04
CLCN4-201ENST00000380829 CTNNBL1Q8WYA6 563 aaPredicted RBP15.32■□□□□ 0.04
CLCN4-201ENST00000380829 DHX38Q92620 1227 aaKnown RBP15.32■□□□□ 0.04
CLCN4-201ENST00000380829 ARL8AQ96BM9 186 aa15.32■□□□□ 0.04
CLCN4-201ENST00000380829 NT5C1BQ96P26 610 aa15.32■□□□□ 0.04
CLCN4-201ENST00000380829 LRRC1Q9BTT6 524 aa15.32■□□□□ 0.04
CLCN4-201ENST00000380829 ATP8B3O60423 1300 aa15.32■□□□□ 0.04
CLCN4-201ENST00000380829 A0A0A6YYK5 440 aaPredicted RBP15.32■□□□□ 0.04
CLCN4-201ENST00000380829 TTLL13PA6NNM8 815 aa15.32■□□□□ 0.04
CLCN4-201ENST00000380829 KCNK3O14649 394 aa15.32■□□□□ 0.04
CLCN4-201ENST00000380829 CHUKO15111 745 aa15.32■□□□□ 0.04
CLCN4-201ENST00000380829 KIF4AO95239 1232 aa15.32■□□□□ 0.04
CLCN4-201ENST00000380829 TMEM253P0C7T8 217 aa15.32■□□□□ 0.04
CLCN4-201ENST00000380829 TXNP10599 105 aaKnown RBP15.32■□□□□ 0.04
CLCN4-201ENST00000380829 TNNI1P19237 187 aa15.32■□□□□ 0.04
CLCN4-201ENST00000380829 MCM3P25205 808 aa15.32■□□□□ 0.04
CLCN4-201ENST00000380829 ABCD1P33897 745 aa15.32■□□□□ 0.04
CLCN4-201ENST00000380829 PRPF4BQ13523 1007 aaKnown RBP15.32■□□□□ 0.04
CLCN4-201ENST00000380829 PREPLQ4J6C6 727 aaPredicted RBP15.32■□□□□ 0.04
CLCN4-201ENST00000380829 CCNI2Q6ZMN8 369 aaPredicted RBP15.32■□□□□ 0.04
CLCN4-201ENST00000380829 DAAM2Q86T65 1068 aa15.32■□□□□ 0.04
CLCN4-201ENST00000380829 PNMA8AQ86V59 439 aaPredicted RBP15.32■□□□□ 0.04
CLCN4-201ENST00000380829 FAM71AQ8IYT1 594 aa15.32■□□□□ 0.04
CLCN4-201ENST00000380829 MMGT1Q8N4V1 131 aa15.32■□□□□ 0.04
CLCN4-201ENST00000380829 EPS8L1Q8TE68 723 aa15.32■□□□□ 0.04
CLCN4-201ENST00000380829 TRAPPC12Q8WVT3 735 aa15.32■□□□□ 0.04
CLCN4-201ENST00000380829 SHC3Q92529 594 aa15.32■□□□□ 0.04
CLCN4-201ENST00000380829 FNBP1Q96RU3 617 aa15.32■□□□□ 0.04
CLCN4-201ENST00000380829 SH3GL2Q99962 352 aa15.32■□□□□ 0.04
CLCN4-201ENST00000380829 STYXL1Q9Y6J8 313 aa15.32■□□□□ 0.04
CLCN4-201ENST00000380829 GTF2H1P32780 548 aa15.31■□□□□ 0.04
CLCN4-201ENST00000380829 KCTD16Q68DU8 428 aa15.31■□□□□ 0.04
CLCN4-201ENST00000380829 NAIF1Q69YI7 327 aaPredicted RBP15.31■□□□□ 0.04
CLCN4-201ENST00000380829 CCDC62Q6P9F0 684 aa15.31■□□□□ 0.04
CLCN4-201ENST00000380829 CRELD2Q6UXH1 353 aaPredicted RBP15.31■□□□□ 0.04
CLCN4-201ENST00000380829 TAF4BQ92750 862 aa15.31■□□□□ 0.04
CLCN4-201ENST00000380829 VTI1AQ96AJ9 217 aa15.31■□□□□ 0.04
CLCN4-201ENST00000380829 ZBTB10Q96DT7 871 aa15.31■□□□□ 0.04
CLCN4-201ENST00000380829 ZNF668Q96K58 619 aaPredicted RBP15.31■□□□□ 0.04
CLCN4-201ENST00000380829 FAM167AQ96KS9 214 aa15.31■□□□□ 0.04
CLCN4-201ENST00000380829 MSTO1Q9BUK6 570 aa15.31■□□□□ 0.04
CLCN4-201ENST00000380829 KLC4Q9NSK0 619 aa15.31■□□□□ 0.04
CLCN4-201ENST00000380829 PNMA3Q9UL41 463 aa15.31■□□□□ 0.04
CLCN4-201ENST00000380829 PTPRJQ12913 1337 aa15.31■□□□□ 0.04
CLCN4-201ENST00000380829 TARSL2A2RTX5 802 aaKnown RBP15.31■□□□□ 0.04
CLCN4-201ENST00000380829 ZBTB42B2RXF5 422 aa15.31■□□□□ 0.04
CLCN4-201ENST00000380829 PDHXO00330 501 aa15.31■□□□□ 0.04
CLCN4-201ENST00000380829 ADCY3O60266 1144 aa15.31■□□□□ 0.04
CLCN4-201ENST00000380829 SRGAP2CP0DJJ0 459 aa15.31■□□□□ 0.04
CLCN4-201ENST00000380829 SLC7A5Q01650 507 aa15.31■□□□□ 0.04
CLCN4-201ENST00000380829 ITIH3Q06033 890 aa15.31■□□□□ 0.04
CLCN4-201ENST00000380829 MKRN4PQ13434 485 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms