RNA–Protein interactions for RNA: ENST00000380746.8

DNMT3A-203, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-203ENST00000380746 VPS37BQ9H9H4 285 aa11.71□□□□□ -0.54
DNMT3A-203ENST00000380746 ELP3Q9H9T3 547 aa11.71□□□□□ -0.54
DNMT3A-203ENST00000380746 ZNF302Q9NR11 478 aa11.71□□□□□ -0.54
DNMT3A-203ENST00000380746 FAM114A2Q9NRY5 505 aa11.71□□□□□ -0.54
DNMT3A-203ENST00000380746 CLEC11AQ9Y240 323 aa11.71□□□□□ -0.54
DNMT3A-203ENST00000380746 LRRD1A4D1F6 860 aa11.7□□□□□ -0.54
DNMT3A-203ENST00000380746 O00370 1275 aa11.7□□□□□ -0.54
DNMT3A-203ENST00000380746 RTN2O75298 545 aa11.7□□□□□ -0.54
DNMT3A-203ENST00000380746 CENPFP49454 3210 aa11.7□□□□□ -0.54
DNMT3A-203ENST00000380746 AARSP49588 968 aaKnown RBP eCLIP11.7□□□□□ -0.54
DNMT3A-203ENST00000380746 MARSP56192 900 aaKnown RBP11.7□□□□□ -0.54
DNMT3A-203ENST00000380746 BACE1P56817 501 aa11.7□□□□□ -0.54
DNMT3A-203ENST00000380746 KRT17Q04695 432 aa11.7□□□□□ -0.54
DNMT3A-203ENST00000380746 ZNF844Q08AG5 666 aa11.7□□□□□ -0.54
DNMT3A-203ENST00000380746 GRM1Q13255 1194 aa11.7□□□□□ -0.54
DNMT3A-203ENST00000380746 SEPT7Q16181 437 aaKnown RBP11.7□□□□□ -0.54
DNMT3A-203ENST00000380746 DCAF12L1Q5VU92 463 aa11.7□□□□□ -0.54
DNMT3A-203ENST00000380746 RNF149Q8NC42 400 aa11.7□□□□□ -0.54
DNMT3A-203ENST00000380746 ATP8B4Q8TF62 1192 aa11.7□□□□□ -0.54
DNMT3A-203ENST00000380746 ERP44Q9BS26 406 aa11.7□□□□□ -0.54
DNMT3A-203ENST00000380746 DDX23Q9BUQ8 820 aaKnown RBP11.7□□□□□ -0.54
DNMT3A-203ENST00000380746 SLC38A10Q9HBR0 1119 aa11.7□□□□□ -0.54
DNMT3A-203ENST00000380746 CNTNAP1P78357 1384 aa11.7□□□□□ -0.54
DNMT3A-203ENST00000380746 WDR91A4D1P6 747 aa11.7□□□□□ -0.54
DNMT3A-203ENST00000380746 GNA15P30679 374 aa11.7□□□□□ -0.54
DNMT3A-203ENST00000380746 MDH1P40925 334 aaKnown RBP11.7□□□□□ -0.54
DNMT3A-203ENST00000380746 JAK3P52333 1124 aa11.7□□□□□ -0.54
DNMT3A-203ENST00000380746 LY6KQ17RY6 165 aa11.7□□□□□ -0.54
DNMT3A-203ENST00000380746 KCNT1Q5JUK3 1230 aa11.7□□□□□ -0.54
DNMT3A-203ENST00000380746 MIS18BP1Q6P0N0 1132 aa11.7□□□□□ -0.54
DNMT3A-203ENST00000380746 SCYL2Q6P3W7 929 aa11.7□□□□□ -0.54
DNMT3A-203ENST00000380746 ZNF662Q6ZS27 426 aa11.7□□□□□ -0.54
DNMT3A-203ENST00000380746 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.7□□□□□ -0.54
DNMT3A-203ENST00000380746 C7orf43Q8WVR3 580 aa11.7□□□□□ -0.54
DNMT3A-203ENST00000380746 LBHD1Q9BQE6 289 aaPredicted RBP11.7□□□□□ -0.54
DNMT3A-203ENST00000380746 MKNK1Q9BUB5 465 aa11.7□□□□□ -0.54
DNMT3A-203ENST00000380746 A1CFQ9NQ94 594 aaKnown RBP11.7□□□□□ -0.54
DNMT3A-203ENST00000380746 INTS9Q9NV88 658 aaKnown RBP11.7□□□□□ -0.54
DNMT3A-203ENST00000380746 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.7□□□□□ -0.54
DNMT3A-203ENST00000380746 TLR3O15455 904 aaKnown RBP11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 GRAP2O75791 330 aa11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 CETN2P41208 172 aa11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 RPL21P46778 160 aaKnown RBP11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 TMEM62Q0P6H9 643 aa11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 DRP2Q13474 957 aa11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 EMC2Q15006 297 aa11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 FAM47EQ6ZV65 393 aa11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 LRRN4Q8WUT4 740 aa11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 AS3MTQ9HBK9 375 aa11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 CHST7Q9NS84 486 aa11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 SAE1Q9UBE0 346 aaPredicted RBP11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 KIAA1551Q9HCM1 1747 aa11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 GGPS1O95749 300 aa11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 TMEM191BP0C7N4 346 aa11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 RARAP10276 462 aa11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 RALAP11233 206 aa11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 PRKCIP41743 596 aa11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 MTMR3Q13615 1198 aa11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 TMEM132BQ14DG7 1078 aa11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 LIN9Q5TKA1 542 aa11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 PCNX4Q63HM2 1172 aa11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 TMEM161BQ8NDZ6 487 aa11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 TRPM4Q8TD43 1214 aa11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 ACTRT1Q8TDG2 376 aa11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 ZNF473Q8WTR7 871 aaKnown RBP11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 FIZ1Q96SL8 496 aa11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 CYP26B1Q9NR63 512 aa11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 GEMIN8Q9NWZ8 242 aaKnown RBP11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 PSD3Q9NYI0 1048 aa11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 CTNNAL1Q9UBT7 734 aa11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 PASKQ96RG2 1323 aa11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 RASGRF2O14827 1237 aa11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 DHX15O43143 795 aaKnown RBP11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 ATF2P15336 505 aa11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 HMGB2P26583 209 aaKnown RBP11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 PTGER2P43116 358 aa11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 JAM2P57087 298 aa11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 STXBP2Q15833 593 aa11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 Q3C1V9 767 aa11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 SRRM1Q8IYB3 904 aaKnown RBP11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 ZSWIM1Q9BR11 485 aa11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 TEX13BQ9BXU2 312 aa11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 ACAD9Q9H845 621 aa11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 CSADQ9Y600 493 aa11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 UMODL1Q5DID0 1318 aa11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 ADGRA3Q8IWK6 1321 aa11.69□□□□□ -0.54
DNMT3A-203ENST00000380746 SYNJ2BP-COX16A0A087WUM0 186 aa11.68□□□□□ -0.54
DNMT3A-203ENST00000380746 KRT15P19012 456 aa11.68□□□□□ -0.54
DNMT3A-203ENST00000380746 LACTBP83111 547 aaPredicted RBP11.68□□□□□ -0.54
DNMT3A-203ENST00000380746 MICALCLQ6ZW33 695 aa11.68□□□□□ -0.54
DNMT3A-203ENST00000380746 SESTD1Q86VW0 696 aa11.68□□□□□ -0.54
DNMT3A-203ENST00000380746 IQCKQ8N0W5 287 aa11.68□□□□□ -0.54
DNMT3A-203ENST00000380746 SCFD2Q8WU76 684 aa11.68□□□□□ -0.54
DNMT3A-203ENST00000380746 LPAR1Q92633 364 aa11.68□□□□□ -0.54
DNMT3A-203ENST00000380746 COX16Q9P0S2 106 aa11.68□□□□□ -0.54
DNMT3A-203ENST00000380746 ANAPC5Q9UJX4 755 aa11.68□□□□□ -0.54
DNMT3A-203ENST00000380746 HMGB1P1B2RPK0 211 aaPredicted RBP11.68□□□□□ -0.54
DNMT3A-203ENST00000380746 SPAG7O75391 227 aa11.68□□□□□ -0.54
DNMT3A-203ENST00000380746 KRT1P04264 644 aa11.68□□□□□ -0.54
DNMT3A-203ENST00000380746 TNFSF9P41273 254 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms